Protein–RNA interactions for Protein: P01730

CD4, T-cell surface glycoprotein CD4, humanhuman

Predictions only

Length 458 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CD4P01730 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CD4P01730 STAC-204ENST00000457375 1366 ntTSL 2 BASIC22.12■■□□□ 1.13
CD4P01730 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
CD4P01730 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC22.11■■□□□ 1.13
CD4P01730 IER5L-201ENST00000372491 2711 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
CD4P01730 PKMYT1-216ENST00000574730 1806 ntTSL 2 BASIC22.11■■□□□ 1.13
CD4P01730 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
CD4P01730 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CD4P01730 PTPN18-202ENST00000347849 2472 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
CD4P01730 VGLL3-201ENST00000383698 2475 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
CD4P01730 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
CD4P01730 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC22.11■■□□□ 1.13
CD4P01730 AL137013.1-201ENST00000432946 1228 ntBASIC22.11■■□□□ 1.13
CD4P01730 SLC25A3P1-201ENST00000443844 931 ntBASIC22.11■■□□□ 1.13
CD4P01730 ELOVL2-AS1-202ENST00000456616 903 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
CD4P01730 NEURL1B-202ENST00000520919 1089 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
CD4P01730 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
CD4P01730 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC22.11■■□□□ 1.13
CD4P01730 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.13
CD4P01730 CPEB1-218ENST00000620182 2422 ntTSL 2 BASIC22.11■■□□□ 1.13
CD4P01730 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC22.11■■□□□ 1.13
CD4P01730 RAP1B-204ENST00000393436 2049 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CD4P01730 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC22.11■■□□□ 1.13
CD4P01730 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CD4P01730 ILK-203ENST00000420936 1692 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
CD4P01730 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
CD4P01730 GPR162-203ENST00000428545 1610 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
CD4P01730 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
CD4P01730 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC22.1■■□□□ 1.13
CD4P01730 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
CD4P01730 ASPHD1-201ENST00000308748 1584 ntAPPRIS P2 TSL 1 (best) BASIC22.1■■□□□ 1.13
CD4P01730 TMEM88B-201ENST00000378821 492 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
CD4P01730 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC22.1■■□□□ 1.13
CD4P01730 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC22.1■■□□□ 1.13
CD4P01730 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC22.1■■□□□ 1.13
CD4P01730 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC22.1■■□□□ 1.13
CD4P01730 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC22.1■■□□□ 1.13
CD4P01730 RPS27A-211ENST00000639844 606 ntTSL 5 BASIC22.1■■□□□ 1.13
CD4P01730 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
CD4P01730 TRIM3-214ENST00000536344 2704 ntTSL 2 BASIC22.1■■□□□ 1.13
CD4P01730 CENPU-201ENST00000281453 1998 ntAPPRIS P2 TSL 1 (best) BASIC22.1■■□□□ 1.13
CD4P01730 PKIB-206ENST00000392490 1811 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
CD4P01730 CACNG8-201ENST00000270458 8747 ntAPPRIS ALT2 TSL 1 (best) BASIC22.1■■□□□ 1.13
CD4P01730 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CD4P01730 REEP5-202ENST00000379638 3326 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CD4P01730 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
CD4P01730 VSIG2-202ENST00000403470 1191 ntTSL 2 BASIC22.09■■□□□ 1.13
CD4P01730 AC104076.2-201ENST00000448912 469 ntBASIC22.09■■□□□ 1.13
CD4P01730 LINC00636-201ENST00000494231 1264 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
CD4P01730 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC22.09■■□□□ 1.13
CD4P01730 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC22.09■■□□□ 1.13
CD4P01730 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC22.09■■□□□ 1.13
CD4P01730 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC22.09■■□□□ 1.13
CD4P01730 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC22.08■■□□□ 1.13
CD4P01730 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC22.08■■□□□ 1.13
CD4P01730 C7orf26-201ENST00000344417 2182 ntAPPRIS P1 TSL 2 BASIC22.08■■□□□ 1.13
CD4P01730 KRT16P1-201ENST00000399124 1418 ntBASIC22.08■■□□□ 1.13
CD4P01730 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC22.08■■□□□ 1.13
CD4P01730 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
CD4P01730 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC22.08■■□□□ 1.13
CD4P01730 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
CD4P01730 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
CD4P01730 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.13
CD4P01730 DUX4L26-201ENST00000489078 1255 ntBASIC22.08■■□□□ 1.13
CD4P01730 TMA16-209ENST00000513272 803 ntTSL 2 BASIC22.08■■□□□ 1.13
CD4P01730 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC22.08■■□□□ 1.13
CD4P01730 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC22.08■■□□□ 1.13
CD4P01730 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
CD4P01730 MRGBP-201ENST00000370487 2781 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
CD4P01730 ST3GAL3-205ENST00000347631 1324 ntTSL 5 BASIC22.07■■□□□ 1.12
CD4P01730 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CD4P01730 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
CD4P01730 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC22.07■■□□□ 1.12
CD4P01730 PTBP1P-201ENST00000554374 1601 ntBASIC22.07■■□□□ 1.12
CD4P01730 AC121338.2-201ENST00000622535 1744 ntBASIC22.07■■□□□ 1.12
CD4P01730 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC22.07■■□□□ 1.12
CD4P01730 UBE2C-204ENST00000356455 850 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CD4P01730 GCHFR-205ENST00000559932 695 ntTSL 2 BASIC22.07■■□□□ 1.12
CD4P01730 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC22.07■■□□□ 1.12
CD4P01730 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC22.07■■□□□ 1.12
CD4P01730 AC011445.1-201ENST00000601911 877 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
CD4P01730 PPP1R12C-201ENST00000263433 2924 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CD4P01730 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
CD4P01730 SLC27A4-202ENST00000372870 1557 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
CD4P01730 SQLE-206ENST00000523430 1879 ntTSL 2 BASIC22.07■■□□□ 1.12
CD4P01730 LRCH4-209ENST00000497245 2014 ntTSL 5 BASIC22.06■■□□□ 1.12
CD4P01730 ILDR2-206ENST00000528703 2446 ntAPPRIS ALT2 TSL 5 BASIC22.06■■□□□ 1.12
CD4P01730 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CD4P01730 POMZP3-201ENST00000275569 1259 ntTSL 2 BASIC22.06■■□□□ 1.12
CD4P01730 NUDT8-201ENST00000301490 809 ntAPPRIS P3 TSL 1 (best) BASIC22.06■■□□□ 1.12
CD4P01730 TBC1D7-201ENST00000343141 1027 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
CD4P01730 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC22.06■■□□□ 1.12
CD4P01730 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC22.06■■□□□ 1.12
CD4P01730 NTF6B-201ENST00000591913 560 ntBASIC22.06■■□□□ 1.12
CD4P01730 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC22.06■■□□□ 1.12
CD4P01730 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CD4P01730 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC22.06■■□□□ 1.12
CD4P01730 ATG4B-204ENST00000402096 1685 ntTSL 2 BASIC22.06■■□□□ 1.12
CD4P01730 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
CD4P01730 ST3GAL5-202ENST00000377332 2165 ntTSL 5 BASIC22.06■■□□□ 1.12
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms