Protein–RNA interactions for Protein: O95475

SIX6, Homeobox protein SIX6, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIX6O95475 PRMT2-203ENST00000355680 2688 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SIX6O95475 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SIX6O95475 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC16.67■□□□□ 0.26
SIX6O95475 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC16.67■□□□□ 0.26
SIX6O95475 MAN1B1-AS1-201ENST00000596585 1872 ntBASIC16.67■□□□□ 0.26
SIX6O95475 SYF2-201ENST00000236273 1345 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SIX6O95475 HES5-201ENST00000378453 1306 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SIX6O95475 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
SIX6O95475 P2RX5-202ENST00000345901 2031 ntTSL 5 BASIC16.67■□□□□ 0.26
SIX6O95475 AL031658.1-201ENST00000449519 2013 ntTSL 2 BASIC16.67■□□□□ 0.26
SIX6O95475 RSPO4-201ENST00000217260 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SIX6O95475 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SIX6O95475 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SIX6O95475 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SIX6O95475 IGFLR1-201ENST00000246532 1645 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
SIX6O95475 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
SIX6O95475 PROSER2-201ENST00000277570 3333 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
SIX6O95475 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
SIX6O95475 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SIX6O95475 RREB1-203ENST00000379933 5826 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SIX6O95475 AL390961.4-201ENST00000623958 2535 ntBASIC16.66■□□□□ 0.26
SIX6O95475 ECHDC1-203ENST00000368291 1354 ntTSL 2 BASIC16.66■□□□□ 0.26
SIX6O95475 SNX21-201ENST00000342644 1506 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SIX6O95475 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC16.66■□□□□ 0.26
SIX6O95475 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SIX6O95475 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
SIX6O95475 CCDC157-201ENST00000338306 3001 ntAPPRIS P3 TSL 5 BASIC16.66■□□□□ 0.26
SIX6O95475 FBLIM1-202ENST00000375766 3695 ntAPPRIS P1 TSL 2 BASIC16.66■□□□□ 0.26
SIX6O95475 ACYP2-202ENST00000394666 993 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SIX6O95475 SLC16A3-222ENST00000619321 2015 ntAPPRIS P1 TSL 5 BASIC16.66■□□□□ 0.26
SIX6O95475 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC16.66■□□□□ 0.26
SIX6O95475 SLC35A3-217ENST00000639807 2767 ntTSL 5 BASIC16.66■□□□□ 0.26
SIX6O95475 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
SIX6O95475 OGFOD2-201ENST00000228922 1780 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SIX6O95475 ASL-203ENST00000380839 1765 ntTSL 5 BASIC16.66■□□□□ 0.26
SIX6O95475 COPS7A-208ENST00000538410 1610 ntTSL 3 BASIC16.66■□□□□ 0.26
SIX6O95475 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SIX6O95475 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC16.66■□□□□ 0.26
SIX6O95475 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC16.66■□□□□ 0.26
SIX6O95475 TP73-202ENST00000354437 2140 ntTSL 5 BASIC16.66■□□□□ 0.26
SIX6O95475 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC16.66■□□□□ 0.26
SIX6O95475 PRR16-201ENST00000379551 1826 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
SIX6O95475 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC16.66■□□□□ 0.26
SIX6O95475 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SIX6O95475 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SIX6O95475 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC16.65■□□□□ 0.26
SIX6O95475 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
SIX6O95475 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
SIX6O95475 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SIX6O95475 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SIX6O95475 PGLYRP2-202ENST00000340880 2230 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SIX6O95475 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC16.65■□□□□ 0.26
SIX6O95475 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC16.65■□□□□ 0.26
SIX6O95475 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC16.65■□□□□ 0.26
SIX6O95475 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SIX6O95475 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC16.65■□□□□ 0.26
SIX6O95475 AC020916.1-201ENST00000587762 1774 ntBASIC16.65■□□□□ 0.26
SIX6O95475 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SIX6O95475 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC16.65■□□□□ 0.26
SIX6O95475 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
SIX6O95475 STX18-201ENST00000306200 2138 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SIX6O95475 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SIX6O95475 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
SIX6O95475 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SIX6O95475 NAA20-203ENST00000398602 1604 ntTSL 5 BASIC16.65■□□□□ 0.26
SIX6O95475 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC16.65■□□□□ 0.26
SIX6O95475 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
SIX6O95475 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SIX6O95475 EMX2-201ENST00000442245 2710 ntTSL 2 BASIC16.65■□□□□ 0.26
SIX6O95475 DPP3P2-201ENST00000416030 1696 ntBASIC16.65■□□□□ 0.26
SIX6O95475 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
SIX6O95475 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
SIX6O95475 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC16.65■□□□□ 0.26
SIX6O95475 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
SIX6O95475 TRAPPC2L-201ENST00000301021 2215 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SIX6O95475 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC16.65■□□□□ 0.26
SIX6O95475 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
SIX6O95475 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
SIX6O95475 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC16.64■□□□□ 0.26
SIX6O95475 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC16.64■□□□□ 0.26
SIX6O95475 BX119927.1-201ENST00000636596 1552 ntBASIC16.64■□□□□ 0.25
SIX6O95475 PDE1C-206ENST00000396193 5109 ntAPPRIS P4 TSL 2 BASIC16.64■□□□□ 0.25
SIX6O95475 CYP2A6-201ENST00000301141 1764 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SIX6O95475 SSTR3-202ENST00000617123 1781 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SIX6O95475 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SIX6O95475 SERBP1-202ENST00000370990 1621 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SIX6O95475 MYCBPAP-202ENST00000419930 1640 ntAPPRIS ALT2 TSL 1 (best) BASIC16.64■□□□□ 0.25
SIX6O95475 LINC00682-201ENST00000498940 1625 ntTSL 3 BASIC16.64■□□□□ 0.25
SIX6O95475 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC16.64■□□□□ 0.25
SIX6O95475 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
SIX6O95475 UBE2C-202ENST00000335046 737 ntTSL 2 BASIC16.64■□□□□ 0.25
SIX6O95475 NKIRAS2-209ENST00000479407 992 ntTSL 3 BASIC16.64■□□□□ 0.25
SIX6O95475 MIR2861-201ENST00000636310 90 ntBASIC16.64■□□□□ 0.25
SIX6O95475 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC16.64■□□□□ 0.25
SIX6O95475 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
SIX6O95475 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC16.64■□□□□ 0.25
SIX6O95475 ZNF487-202ENST00000437590 2111 ntTSL 2 BASIC16.64■□□□□ 0.25
SIX6O95475 GLG1-214ENST00000627032 2147 ntTSL 5 BASIC16.64■□□□□ 0.25
SIX6O95475 CROCCP3-202ENST00000420820 1947 ntBASIC16.64■□□□□ 0.25
SIX6O95475 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 24.3 ms