Protein–RNA interactions for Protein: O75382

TRIM3, Tripartite motif-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3O75382 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRIM3O75382 SUMF2-208ENST00000434526 2052 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRIM3O75382 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC18.53■□□□□ 0.56
TRIM3O75382 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRIM3O75382 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRIM3O75382 CKLF-201ENST00000264001 669 ntAPPRIS P4 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRIM3O75382 RCN3-201ENST00000270645 1859 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRIM3O75382 GUK1-209ENST00000366730 937 ntAPPRIS P3 TSL 3 BASIC18.53■□□□□ 0.56
TRIM3O75382 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC18.53■□□□□ 0.56
TRIM3O75382 AC004882.1-201ENST00000416352 590 ntTSL 3 BASIC18.53■□□□□ 0.56
TRIM3O75382 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC18.53■□□□□ 0.56
TRIM3O75382 KRT8P36-201ENST00000489121 1440 ntBASIC18.53■□□□□ 0.56
TRIM3O75382 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC18.53■□□□□ 0.56
TRIM3O75382 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC18.53■□□□□ 0.56
TRIM3O75382 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC18.53■□□□□ 0.56
TRIM3O75382 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRIM3O75382 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRIM3O75382 CDIPT-202ENST00000561555 1726 ntTSL 2 BASIC18.53■□□□□ 0.56
TRIM3O75382 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC18.53■□□□□ 0.56
TRIM3O75382 ESRRA-202ENST00000405666 2283 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRIM3O75382 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
TRIM3O75382 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRIM3O75382 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
TRIM3O75382 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
TRIM3O75382 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRIM3O75382 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRIM3O75382 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
TRIM3O75382 RUVBL2-206ENST00000595090 2009 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRIM3O75382 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC18.52■□□□□ 0.56
TRIM3O75382 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TRIM3O75382 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRIM3O75382 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRIM3O75382 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TRIM3O75382 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRIM3O75382 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC18.52■□□□□ 0.56
TRIM3O75382 NAT8L-201ENST00000331662 5571 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TRIM3O75382 GUK1-201ENST00000312726 1084 ntAPPRIS P3 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRIM3O75382 MFF-205ENST00000354503 1085 ntTSL 2 BASIC18.52■□□□□ 0.56
TRIM3O75382 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC18.52■□□□□ 0.56
TRIM3O75382 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC18.52■□□□□ 0.56
TRIM3O75382 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC18.52■□□□□ 0.56
TRIM3O75382 IGFBP6-203ENST00000548547 1177 ntAPPRIS ALT2 TSL 5 BASIC18.52■□□□□ 0.56
TRIM3O75382 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC18.52■□□□□ 0.56
TRIM3O75382 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TRIM3O75382 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC18.52■□□□□ 0.56
TRIM3O75382 AC060766.5-201ENST00000590539 871 ntBASIC18.52■□□□□ 0.56
TRIM3O75382 AC013269.1-201ENST00000409259 1653 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRIM3O75382 TISP43-206ENST00000623376 1653 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRIM3O75382 SLC35E4-202ENST00000406566 2081 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
TRIM3O75382 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRIM3O75382 SNUPN-205ENST00000564644 1931 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
TRIM3O75382 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC18.52■□□□□ 0.56
TRIM3O75382 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
TRIM3O75382 VCPKMT-202ENST00000395860 1761 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
TRIM3O75382 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
TRIM3O75382 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.55
TRIM3O75382 PADI2-201ENST00000375481 1607 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
TRIM3O75382 IRX4-208ENST00000622814 2398 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
TRIM3O75382 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TRIM3O75382 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRIM3O75382 TMEM51-201ENST00000376008 1931 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
TRIM3O75382 WWC1-201ENST00000265293 7130 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRIM3O75382 ADARB1-201ENST00000348831 6882 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRIM3O75382 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRIM3O75382 GAS7-202ENST00000396115 929 ntTSL 5 BASIC18.51■□□□□ 0.55
TRIM3O75382 IL15RA-208ENST00000397251 1046 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRIM3O75382 LINC02531-201ENST00000404689 593 ntTSL 5 BASIC18.51■□□□□ 0.55
TRIM3O75382 CCDC103-202ENST00000410006 921 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
TRIM3O75382 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC18.51■□□□□ 0.55
TRIM3O75382 CKLF-CMTM1-204ENST00000532838 587 ntAPPRIS ALT2 TSL 4 BASIC18.51■□□□□ 0.55
TRIM3O75382 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC18.51■□□□□ 0.55
TRIM3O75382 BRWD1-AS2-201ENST00000603064 1028 ntBASIC18.51■□□□□ 0.55
TRIM3O75382 IL15RA-221ENST00000620865 1037 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRIM3O75382 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRIM3O75382 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC18.51■□□□□ 0.55
TRIM3O75382 CHST1-201ENST00000308064 2718 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRIM3O75382 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRIM3O75382 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC18.51■□□□□ 0.55
TRIM3O75382 CRK-204ENST00000574295 1391 ntTSL 5 BASIC18.51■□□□□ 0.55
TRIM3O75382 KCNS3-201ENST00000304101 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRIM3O75382 EGFL7-201ENST00000308874 1747 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRIM3O75382 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
TRIM3O75382 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC18.51■□□□□ 0.55
TRIM3O75382 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
TRIM3O75382 DTX3-208ENST00000551632 1840 ntAPPRIS ALT1 TSL 2 BASIC18.51■□□□□ 0.55
TRIM3O75382 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRIM3O75382 NHLRC1-201ENST00000340650 2248 ntAPPRIS P1 BASIC18.5■□□□□ 0.55
TRIM3O75382 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC18.5■□□□□ 0.55
TRIM3O75382 TMEM163-201ENST00000281924 1892 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRIM3O75382 NFYC-204ENST00000372653 1862 ntTSL 2 BASIC18.5■□□□□ 0.55
TRIM3O75382 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
TRIM3O75382 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC18.5■□□□□ 0.55
TRIM3O75382 MRAP-201ENST00000303645 935 ntAPPRIS P4 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRIM3O75382 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TRIM3O75382 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC18.5■□□□□ 0.55
TRIM3O75382 UNC93B5-201ENST00000530315 699 ntBASIC18.5■□□□□ 0.55
TRIM3O75382 LINC00304-202ENST00000562248 1095 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
TRIM3O75382 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRIM3O75382 USP48-201ENST00000308271 4595 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
TRIM3O75382 RGMA-210ENST00000557301 1929 ntAPPRIS ALT2 TSL 2 BASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 23 ms