Protein–RNA interactions for Protein: O43159

RRP8, Ribosomal RNA-processing protein 8, humanhuman

Known RBP Predictions only

Length 456 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RRP8O43159 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RRP8O43159 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC18.79■□□□□ 0.6
RRP8O43159 CRTC2-203ENST00000368633 2644 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RRP8O43159 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC18.79■□□□□ 0.6
RRP8O43159 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC18.79■□□□□ 0.6
RRP8O43159 SWI5-201ENST00000320188 980 ntAPPRIS P3 TSL 1 (best) BASIC18.79■□□□□ 0.6
RRP8O43159 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
RRP8O43159 GUK1-204ENST00000366721 689 ntTSL 3 BASIC18.79■□□□□ 0.6
RRP8O43159 NPY-202ENST00000405982 565 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RRP8O43159 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC18.79■□□□□ 0.6
RRP8O43159 KRT18P48-201ENST00000434763 852 ntBASIC18.79■□□□□ 0.6
RRP8O43159 ECEL1P2-202ENST00000465689 757 ntBASIC18.79■□□□□ 0.6
RRP8O43159 AC063952.2-201ENST00000498792 1227 ntBASIC18.79■□□□□ 0.6
RRP8O43159 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC18.79■□□□□ 0.6
RRP8O43159 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RRP8O43159 RAB6A-207ENST00000541588 758 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RRP8O43159 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC18.79■□□□□ 0.6
RRP8O43159 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC18.79■□□□□ 0.6
RRP8O43159 TRAF7-205ENST00000567653 666 ntTSL 2 BASIC18.79■□□□□ 0.6
RRP8O43159 CIRBP-217ENST00000588230 1013 ntTSL 5 BASIC18.79■□□□□ 0.6
RRP8O43159 AC008649.1-201ENST00000589557 516 ntTSL 2 BASIC18.79■□□□□ 0.6
RRP8O43159 DBP-204ENST00000599385 709 ntTSL 3 BASIC18.79■□□□□ 0.6
RRP8O43159 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RRP8O43159 SH3D19-211ENST00000604030 5228 ntTSL 5 BASIC18.79■□□□□ 0.6
RRP8O43159 TMEM200B-202ENST00000521452 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RRP8O43159 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RRP8O43159 NR0B1-202ENST00000378970 2021 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RRP8O43159 GUSB-201ENST00000304895 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RRP8O43159 ANKRD2-201ENST00000298808 1350 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
RRP8O43159 VKORC1L1-202ENST00000434382 1541 ntTSL 2 BASIC18.79■□□□□ 0.6
RRP8O43159 PSMD8-210ENST00000620216 1538 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
RRP8O43159 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
RRP8O43159 PPT2-244ENST00000324816 2053 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
RRP8O43159 DCTD-201ENST00000357067 1931 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
RRP8O43159 TRAPPC5-204ENST00000596148 5498 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RRP8O43159 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC18.78■□□□□ 0.6
RRP8O43159 NEURL4-202ENST00000399464 5200 ntAPPRIS P4 TSL 1 (best) BASIC18.78■□□□□ 0.6
RRP8O43159 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
RRP8O43159 PPP1R13B-201ENST00000202556 4958 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RRP8O43159 NDUFA1-201ENST00000371437 766 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RRP8O43159 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC18.78■□□□□ 0.6
RRP8O43159 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC18.78■□□□□ 0.6
RRP8O43159 HLX-AS1-201ENST00000552026 563 ntTSL 4 BASIC18.78■□□□□ 0.6
RRP8O43159 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC18.78■□□□□ 0.6
RRP8O43159 ORAI1-202ENST00000617316 2138 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RRP8O43159 NR5A1-204ENST00000620110 2975 ntTSL 5 BASIC18.78■□□□□ 0.6
RRP8O43159 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC18.78■□□□□ 0.6
RRP8O43159 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.6
RRP8O43159 NFIX-203ENST00000397661 3143 ntTSL 5 BASIC18.78■□□□□ 0.6
RRP8O43159 GABRD-213ENST00000640067 1632 ntAPPRIS ALT2 TSL 5 BASIC18.78■□□□□ 0.6
RRP8O43159 PRKACA-201ENST00000308677 2677 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RRP8O43159 ACAA1-209ENST00000450296 1570 ntTSL 5 BASIC18.77■□□□□ 0.6
RRP8O43159 DMRT1-201ENST00000382276 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RRP8O43159 PNMA6A-201ENST00000421798 2209 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
RRP8O43159 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RRP8O43159 ANKHD1-221ENST00000616482 2064 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
RRP8O43159 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
RRP8O43159 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RRP8O43159 FAH-202ENST00000407106 2152 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
RRP8O43159 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
RRP8O43159 TSPY14P-201ENST00000303979 915 ntBASIC18.77■□□□□ 0.6
RRP8O43159 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC18.77■□□□□ 0.6
RRP8O43159 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC18.77■□□□□ 0.6
RRP8O43159 AL596442.1-201ENST00000429305 429 ntTSL 2 BASIC18.77■□□□□ 0.6
RRP8O43159 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC18.77■□□□□ 0.6
RRP8O43159 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC18.77■□□□□ 0.6
RRP8O43159 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC18.77■□□□□ 0.6
RRP8O43159 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
RRP8O43159 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC18.77■□□□□ 0.6
RRP8O43159 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC18.77■□□□□ 0.59
RRP8O43159 FAM99A-202ENST00000538190 1989 ntBASIC18.77■□□□□ 0.59
RRP8O43159 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
RRP8O43159 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
RRP8O43159 ARFIP2-204ENST00000445086 1300 ntTSL 2 BASIC18.76■□□□□ 0.59
RRP8O43159 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RRP8O43159 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC18.76■□□□□ 0.59
RRP8O43159 LCE3D-201ENST00000368787 613 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RRP8O43159 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC18.76■□□□□ 0.59
RRP8O43159 PP7080-204ENST00000510714 601 ntTSL 3 BASIC18.76■□□□□ 0.59
RRP8O43159 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC18.76■□□□□ 0.59
RRP8O43159 KRTCAP3-207ENST00000543753 956 ntAPPRIS P1 TSL 5 BASIC18.76■□□□□ 0.59
RRP8O43159 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RRP8O43159 AP005242.2-201ENST00000580065 1175 ntBASIC18.76■□□□□ 0.59
RRP8O43159 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC18.76■□□□□ 0.59
RRP8O43159 ZNF575-205ENST00000601282 1086 ntAPPRIS P1 TSL 2 BASIC18.76■□□□□ 0.59
RRP8O43159 AC027682.6-202ENST00000621378 795 ntTSL 2 BASIC18.76■□□□□ 0.59
RRP8O43159 SEPT8-207ENST00000378719 2889 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
RRP8O43159 DAZAP1-211ENST00000592522 2157 ntAPPRIS ALT1 TSL 5 BASIC18.76■□□□□ 0.59
RRP8O43159 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RRP8O43159 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RRP8O43159 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC18.76■□□□□ 0.59
RRP8O43159 RALGPS1-207ENST00000394022 1672 ntTSL 2 BASIC18.76■□□□□ 0.59
RRP8O43159 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC18.75■□□□□ 0.59
RRP8O43159 NR2F2-204ENST00000453270 1712 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RRP8O43159 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC18.75■□□□□ 0.59
RRP8O43159 FGF8-201ENST00000320185 799 ntAPPRIS P4 TSL 1 (best) BASIC18.75■□□□□ 0.59
RRP8O43159 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
RRP8O43159 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
RRP8O43159 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC18.75■□□□□ 0.59
RRP8O43159 C16orf91-201ENST00000442039 978 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
Retrieved 100 of 98,524 protein–RNA pairs in 39 ms