Protein–RNA interactions for Protein: O00507

USP9Y, Probable ubiquitin carboxyl-terminal hydrolase FAF-Y, humanhuman

Predicted RBP Predictions only

Length 2,555 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP9YO00507 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
USP9YO00507 AC141257.4-201ENST00000634557 245 ntBASIC17.34■□□□□ 0.37
USP9YO00507 AC136944.6-201ENST00000634818 245 ntBASIC17.34■□□□□ 0.37
USP9YO00507 AL031432.5-201ENST00000641059 760 ntBASIC17.34■□□□□ 0.37
USP9YO00507 TRABD2A-201ENST00000335459 1844 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
USP9YO00507 CLDN23-201ENST00000519106 2169 ntAPPRIS P1 BASIC17.34■□□□□ 0.37
USP9YO00507 AC096733.2-201ENST00000609937 1394 ntBASIC17.34■□□□□ 0.37
USP9YO00507 TPRN-202ENST00000409012 2718 ntAPPRIS P2 TSL 1 (best) BASIC17.34■□□□□ 0.37
USP9YO00507 TMEM198B-205ENST00000487582 1581 ntTSL 1 (best) BASIC17.34■□□□□ 0.37
USP9YO00507 ATP5G2P1-201ENST00000433580 426 ntBASIC17.34■□□□□ 0.37
USP9YO00507 LAMTOR4-205ENST00000468582 621 ntTSL 2 BASIC17.34■□□□□ 0.37
USP9YO00507 KCNS1-202ENST00000537075 2136 ntAPPRIS P1 TSL 1 (best) BASIC17.34■□□□□ 0.37
USP9YO00507 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC17.34■□□□□ 0.37
USP9YO00507 NECAB3-201ENST00000246190 1989 ntTSL 5 BASIC17.33■□□□□ 0.37
USP9YO00507 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC17.33■□□□□ 0.37
USP9YO00507 SMPD2-201ENST00000258052 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
USP9YO00507 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
USP9YO00507 PACSIN3-201ENST00000298838 1843 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
USP9YO00507 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
USP9YO00507 RASGRP2-208ENST00000394428 444 ntTSL 2 BASIC17.33■□□□□ 0.36
USP9YO00507 AC037459.1-202ENST00000430850 531 ntAPPRIS P1 TSL 4 BASIC17.33■□□□□ 0.36
USP9YO00507 AL512604.3-201ENST00000569583 964 ntBASIC17.33■□□□□ 0.36
USP9YO00507 AC010653.2-201ENST00000623505 997 ntBASIC17.33■□□□□ 0.36
USP9YO00507 TOLLIP-201ENST00000263646 2283 ntTSL 5 BASIC17.33■□□□□ 0.36
USP9YO00507 PIP5K1C-203ENST00000539785 2289 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
USP9YO00507 FBXW4-201ENST00000331272 2483 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
USP9YO00507 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
USP9YO00507 LY6E-203ENST00000517503 1335 ntAPPRIS ALT2 TSL 3 BASIC17.33■□□□□ 0.36
USP9YO00507 PDXDC1-205ENST00000535621 2048 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
USP9YO00507 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC17.33■□□□□ 0.36
USP9YO00507 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC17.33■□□□□ 0.36
USP9YO00507 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
USP9YO00507 C1QL1P1-201ENST00000568105 661 ntBASIC17.33■□□□□ 0.36
USP9YO00507 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC17.33■□□□□ 0.36
USP9YO00507 MIR3180-1-201ENST00000580374 94 ntBASIC17.33■□□□□ 0.36
USP9YO00507 MIR3180-3-201ENST00000584616 94 ntBASIC17.33■□□□□ 0.36
USP9YO00507 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC17.33■□□□□ 0.36
USP9YO00507 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC17.33■□□□□ 0.36
USP9YO00507 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC17.32■□□□□ 0.36
USP9YO00507 PKM-204ENST00000449901 2526 ntTSL 2 BASIC17.32■□□□□ 0.36
USP9YO00507 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
USP9YO00507 CHKB-201ENST00000406938 1638 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
USP9YO00507 FAM21EP-202ENST00000456967 2177 ntTSL 2 BASIC17.32■□□□□ 0.36
USP9YO00507 RAB28-202ENST00000330852 1715 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
USP9YO00507 PFKFB3-216ENST00000625260 1752 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
USP9YO00507 WDR25-201ENST00000335290 2123 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
USP9YO00507 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC17.32■□□□□ 0.36
USP9YO00507 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC17.32■□□□□ 0.36
USP9YO00507 DLL3-201ENST00000205143 2332 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
USP9YO00507 AP006623.1-201ENST00000506172 2061 ntTSL 5 BASIC17.32■□□□□ 0.36
USP9YO00507 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
USP9YO00507 R3HDM4-203ENST00000587975 1765 ntTSL 3 BASIC17.32■□□□□ 0.36
USP9YO00507 CBLN2-209ENST00000585159 2406 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
USP9YO00507 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
USP9YO00507 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC17.32■□□□□ 0.36
USP9YO00507 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
USP9YO00507 KCTD7-202ENST00000443322 1160 ntAPPRIS ALT1 TSL 1 (best) BASIC17.32■□□□□ 0.36
USP9YO00507 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
USP9YO00507 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC17.32■□□□□ 0.36
USP9YO00507 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC17.32■□□□□ 0.36
USP9YO00507 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC17.32■□□□□ 0.36
USP9YO00507 S1PR5-204ENST00000617721 1698 ntTSL 5 BASIC17.31■□□□□ 0.36
USP9YO00507 GPR108-201ENST00000264080 2057 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
USP9YO00507 LAYN-201ENST00000375614 2066 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
USP9YO00507 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
USP9YO00507 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
USP9YO00507 NAPRT-202ENST00000426292 1654 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
USP9YO00507 CHRAC1-203ENST00000519533 1678 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
USP9YO00507 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
USP9YO00507 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC17.31■□□□□ 0.36
USP9YO00507 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC17.31■□□□□ 0.36
USP9YO00507 AC010655.4-201ENST00000462662 707 ntTSL 4 BASIC17.31■□□□□ 0.36
USP9YO00507 PRSS44-201ENST00000515154 1146 ntBASIC17.31■□□□□ 0.36
USP9YO00507 AL441883.1-201ENST00000566170 1045 ntBASIC17.31■□□□□ 0.36
USP9YO00507 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
USP9YO00507 RLBP1-201ENST00000268125 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
USP9YO00507 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
USP9YO00507 RCC2P6-201ENST00000526625 1557 ntBASIC17.31■□□□□ 0.36
USP9YO00507 PAXIP1-AS1-201ENST00000608317 2256 ntBASIC17.31■□□□□ 0.36
USP9YO00507 DISC1-223ENST00000628350 2363 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
USP9YO00507 KLF3-203ENST00000514033 1871 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
USP9YO00507 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
USP9YO00507 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC17.31■□□□□ 0.36
USP9YO00507 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC17.31■□□□□ 0.36
USP9YO00507 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
USP9YO00507 RPL28-210ENST00000560583 1204 ntTSL 2 BASIC17.31■□□□□ 0.36
USP9YO00507 ASF1B-205ENST00000592798 769 ntTSL 2 BASIC17.31■□□□□ 0.36
USP9YO00507 AC104692.2-201ENST00000603054 253 ntBASIC17.31■□□□□ 0.36
USP9YO00507 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
USP9YO00507 SNX5-210ENST00000481323 562 ntTSL 3 BASIC17.3■□□□□ 0.36
USP9YO00507 CYGB-204ENST00000589342 815 ntTSL 3 BASIC17.3■□□□□ 0.36
USP9YO00507 UBA52-210ENST00000598780 668 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
USP9YO00507 RALGPS1-204ENST00000373436 1667 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
USP9YO00507 PKM-201ENST00000319622 2717 ntAPPRIS P5 TSL 2 BASIC17.3■□□□□ 0.36
USP9YO00507 NDEL1-201ENST00000334527 2372 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
USP9YO00507 DEDD2-201ENST00000336034 1882 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
USP9YO00507 TMPRSS5-202ENST00000536856 1811 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
USP9YO00507 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
USP9YO00507 CCNO-201ENST00000282572 1433 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
USP9YO00507 SLC35A2-217ENST00000635589 1424 ntTSL 2 BASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 24.6 ms