Protein–RNA interactions for Protein: A0A0B4J1U4

TRGV5, T-cell receptor gamma variable 5 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV5A0A0B4J1U4 TXNRD3-204ENST00000640433 1932 ntAPPRIS P4 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRGV5A0A0B4J1U4 SMTNL2-202ENST00000389313 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRGV5A0A0B4J1U4 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC17.93■□□□□ 0.46
TRGV5A0A0B4J1U4 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRGV5A0A0B4J1U4 EMILIN2-201ENST00000254528 5910 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRGV5A0A0B4J1U4 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC17.93■□□□□ 0.46
TRGV5A0A0B4J1U4 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRGV5A0A0B4J1U4 IDI1-201ENST00000381344 2301 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRGV5A0A0B4J1U4 TMED4-203ENST00000457408 2322 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRGV5A0A0B4J1U4 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TRGV5A0A0B4J1U4 ZNF821-202ENST00000425432 2000 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
TRGV5A0A0B4J1U4 DMAP1-202ENST00000361745 1545 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRGV5A0A0B4J1U4 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TRGV5A0A0B4J1U4 FMR1-204ENST00000370471 4125 ntTSL 5 BASIC17.92■□□□□ 0.46
TRGV5A0A0B4J1U4 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRGV5A0A0B4J1U4 ZNF561-AS1-201ENST00000585797 1593 ntTSL 2 BASIC17.92■□□□□ 0.46
TRGV5A0A0B4J1U4 C7orf25-201ENST00000350427 2451 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
TRGV5A0A0B4J1U4 FAM3A-208ENST00000419205 1763 ntTSL 2 BASIC17.92■□□□□ 0.46
TRGV5A0A0B4J1U4 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TRGV5A0A0B4J1U4 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC17.92■□□□□ 0.46
TRGV5A0A0B4J1U4 CTAG2-201ENST00000247306 993 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TRGV5A0A0B4J1U4 WDR74-201ENST00000278856 1289 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRGV5A0A0B4J1U4 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRGV5A0A0B4J1U4 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC17.92■□□□□ 0.46
TRGV5A0A0B4J1U4 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC17.92■□□□□ 0.46
TRGV5A0A0B4J1U4 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC17.92■□□□□ 0.46
TRGV5A0A0B4J1U4 AC004706.3-201ENST00000634558 1009 ntTSL 5 BASIC17.92■□□□□ 0.46
TRGV5A0A0B4J1U4 FBXO17-201ENST00000292852 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRGV5A0A0B4J1U4 MON1A-201ENST00000296473 2370 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRGV5A0A0B4J1U4 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TRGV5A0A0B4J1U4 MTMR12-203ENST00000382142 5187 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRGV5A0A0B4J1U4 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC17.92■□□□□ 0.46
TRGV5A0A0B4J1U4 KRT17P2-201ENST00000300992 1314 ntBASIC17.92■□□□□ 0.46
TRGV5A0A0B4J1U4 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TRGV5A0A0B4J1U4 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC17.92■□□□□ 0.46
TRGV5A0A0B4J1U4 HTR7P1-201ENST00000538670 1336 ntBASIC17.92■□□□□ 0.46
TRGV5A0A0B4J1U4 RTP5-201ENST00000343216 2296 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRGV5A0A0B4J1U4 SAAL1-204ENST00000529318 1503 ntAPPRIS ALT1 TSL 5 BASIC17.92■□□□□ 0.46
TRGV5A0A0B4J1U4 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRGV5A0A0B4J1U4 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TRGV5A0A0B4J1U4 ARHGAP5-203ENST00000396582 5786 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TRGV5A0A0B4J1U4 GPR27-201ENST00000304411 2447 ntAPPRIS P1 BASIC17.91■□□□□ 0.46
TRGV5A0A0B4J1U4 NDUFAF3-202ENST00000326925 2012 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRGV5A0A0B4J1U4 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TRGV5A0A0B4J1U4 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRGV5A0A0B4J1U4 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRGV5A0A0B4J1U4 TSPY7P-201ENST00000431358 1114 ntBASIC17.91■□□□□ 0.46
TRGV5A0A0B4J1U4 TSPY1-202ENST00000451548 1160 ntAPPRIS P5 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRGV5A0A0B4J1U4 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRGV5A0A0B4J1U4 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRGV5A0A0B4J1U4 FAM213A-202ENST00000372185 1723 ntTSL 2 BASIC17.91■□□□□ 0.46
TRGV5A0A0B4J1U4 NTMT1-210ENST00000613644 1501 ntAPPRIS P1 TSL 3 BASIC17.91■□□□□ 0.46
TRGV5A0A0B4J1U4 ZNF668-209ENST00000539836 2469 ntTSL 5 BASIC17.91■□□□□ 0.46
TRGV5A0A0B4J1U4 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
TRGV5A0A0B4J1U4 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TRGV5A0A0B4J1U4 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
TRGV5A0A0B4J1U4 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRGV5A0A0B4J1U4 KRT18-202ENST00000388837 1420 ntAPPRIS P1 TSL 5 BASIC17.9■□□□□ 0.46
TRGV5A0A0B4J1U4 MEF2D-203ENST00000368240 1905 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TRGV5A0A0B4J1U4 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRGV5A0A0B4J1U4 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC17.9■□□□□ 0.46
TRGV5A0A0B4J1U4 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRGV5A0A0B4J1U4 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRGV5A0A0B4J1U4 VMO1-201ENST00000328739 766 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRGV5A0A0B4J1U4 MRGPRG-201ENST00000332314 870 ntAPPRIS P1 BASIC17.9■□□□□ 0.46
TRGV5A0A0B4J1U4 AL353807.1-201ENST00000427475 662 ntBASIC17.9■□□□□ 0.46
TRGV5A0A0B4J1U4 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TRGV5A0A0B4J1U4 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC17.9■□□□□ 0.46
TRGV5A0A0B4J1U4 SNX5-213ENST00000486039 602 ntTSL 1 (best) BASIC17.9■□□□□ 0.46
TRGV5A0A0B4J1U4 AC113410.3-201ENST00000623366 203 ntBASIC17.9■□□□□ 0.46
TRGV5A0A0B4J1U4 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRGV5A0A0B4J1U4 LRCH4-211ENST00000619071 2098 ntTSL 5 BASIC17.9■□□□□ 0.46
TRGV5A0A0B4J1U4 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC17.9■□□□□ 0.46
TRGV5A0A0B4J1U4 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC17.9■□□□□ 0.46
TRGV5A0A0B4J1U4 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC17.89■□□□□ 0.46
TRGV5A0A0B4J1U4 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRGV5A0A0B4J1U4 EEF1D-204ENST00000423316 2378 ntAPPRIS P4 TSL 5 BASIC17.89■□□□□ 0.45
TRGV5A0A0B4J1U4 YWHAZ-205ENST00000395956 2974 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRGV5A0A0B4J1U4 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC17.89■□□□□ 0.45
TRGV5A0A0B4J1U4 PABPC1L2B-201ENST00000373521 2197 ntAPPRIS P1 BASIC17.89■□□□□ 0.45
TRGV5A0A0B4J1U4 C1QBP-201ENST00000225698 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRGV5A0A0B4J1U4 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
TRGV5A0A0B4J1U4 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC17.89■□□□□ 0.45
TRGV5A0A0B4J1U4 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC17.89■□□□□ 0.45
TRGV5A0A0B4J1U4 AC019257.1-201ENST00000517676 557 ntTSL 5 BASIC17.89■□□□□ 0.45
TRGV5A0A0B4J1U4 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC17.89■□□□□ 0.45
TRGV5A0A0B4J1U4 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC17.89■□□□□ 0.45
TRGV5A0A0B4J1U4 MIR4785-201ENST00000585005 73 ntBASIC17.89■□□□□ 0.45
TRGV5A0A0B4J1U4 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC17.89■□□□□ 0.45
TRGV5A0A0B4J1U4 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC17.89■□□□□ 0.45
TRGV5A0A0B4J1U4 DDRGK1-201ENST00000354488 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRGV5A0A0B4J1U4 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC17.89■□□□□ 0.45
TRGV5A0A0B4J1U4 ME2-216ENST00000639850 2331 ntTSL 5 BASIC17.89■□□□□ 0.45
TRGV5A0A0B4J1U4 IL17RC-202ENST00000383812 2384 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRGV5A0A0B4J1U4 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRGV5A0A0B4J1U4 DDX55-205ENST00000538744 1735 ntTSL 5 BASIC17.89■□□□□ 0.45
TRGV5A0A0B4J1U4 S1PR5-202ENST00000439028 2191 ntAPPRIS P1 TSL 2 BASIC17.89■□□□□ 0.45
TRGV5A0A0B4J1U4 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.89■□□□□ 0.45
TRGV5A0A0B4J1U4 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC17.88■□□□□ 0.45
TRGV5A0A0B4J1U4 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.88■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 85 ms