Protein–RNA interactions for Protein: A0A0A0MS03

TRBV5-3, T-cell receptor beta variable 5-3 (non-functional) (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV5-3A0A0A0MS03 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC18.7■□□□□ 0.58
TRBV5-3A0A0A0MS03 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC18.7■□□□□ 0.58
TRBV5-3A0A0A0MS03 AC008105.3-201ENST00000586376 844 ntTSL 3 BASIC18.7■□□□□ 0.58
TRBV5-3A0A0A0MS03 AC004408.2-201ENST00000623613 2777 ntBASIC18.7■□□□□ 0.58
TRBV5-3A0A0A0MS03 CLN3-240ENST00000631023 1586 ntTSL 5 BASIC18.7■□□□□ 0.58
TRBV5-3A0A0A0MS03 AC091230.1-202ENST00000564823 5356 ntTSL 2 BASIC18.7■□□□□ 0.58
TRBV5-3A0A0A0MS03 SLC27A3-214ENST00000624995 2413 ntAPPRIS P2 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRBV5-3A0A0A0MS03 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
TRBV5-3A0A0A0MS03 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC18.7■□□□□ 0.58
TRBV5-3A0A0A0MS03 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRBV5-3A0A0A0MS03 CDHR5-201ENST00000349570 2318 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRBV5-3A0A0A0MS03 TMEM53-202ENST00000372237 2310 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRBV5-3A0A0A0MS03 LIPG-203ENST00000577628 2323 ntTSL 2 BASIC18.69■□□□□ 0.58
TRBV5-3A0A0A0MS03 GCK-205ENST00000437084 1385 ntTSL 5 BASIC18.69■□□□□ 0.58
TRBV5-3A0A0A0MS03 REV1-201ENST00000258428 4751 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRBV5-3A0A0A0MS03 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRBV5-3A0A0A0MS03 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
TRBV5-3A0A0A0MS03 EARS2-206ENST00000563232 1709 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TRBV5-3A0A0A0MS03 KSR1-205ENST00000509603 2731 ntAPPRIS ALT2 TSL 5 BASIC18.69■□□□□ 0.58
TRBV5-3A0A0A0MS03 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRBV5-3A0A0A0MS03 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRBV5-3A0A0A0MS03 STMN4-202ENST00000350889 2288 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TRBV5-3A0A0A0MS03 PIK3R1-201ENST00000320694 2625 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TRBV5-3A0A0A0MS03 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TRBV5-3A0A0A0MS03 P2RX2-202ENST00000348800 1222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRBV5-3A0A0A0MS03 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRBV5-3A0A0A0MS03 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC18.69■□□□□ 0.58
TRBV5-3A0A0A0MS03 CNN2P6-201ENST00000439038 900 ntBASIC18.69■□□□□ 0.58
TRBV5-3A0A0A0MS03 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TRBV5-3A0A0A0MS03 P2RX2-207ENST00000449132 1113 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TRBV5-3A0A0A0MS03 LGR4-203ENST00000480977 492 ntTSL 2 BASIC18.69■□□□□ 0.58
TRBV5-3A0A0A0MS03 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC18.69■□□□□ 0.58
TRBV5-3A0A0A0MS03 AC092368.3-201ENST00000562549 1107 ntTSL 5 BASIC18.69■□□□□ 0.58
TRBV5-3A0A0A0MS03 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC18.69■□□□□ 0.58
TRBV5-3A0A0A0MS03 AC140479.5-201ENST00000568189 735 ntTSL 3 BASIC18.69■□□□□ 0.58
TRBV5-3A0A0A0MS03 MFSD11-216ENST00000590393 1141 ntBASIC18.69■□□□□ 0.58
TRBV5-3A0A0A0MS03 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TRBV5-3A0A0A0MS03 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
TRBV5-3A0A0A0MS03 IDUA-201ENST00000247933 2163 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRBV5-3A0A0A0MS03 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
TRBV5-3A0A0A0MS03 AL032819.2-201ENST00000624543 2162 ntBASIC18.69■□□□□ 0.58
TRBV5-3A0A0A0MS03 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRBV5-3A0A0A0MS03 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
TRBV5-3A0A0A0MS03 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
TRBV5-3A0A0A0MS03 CDK13-207ENST00000613626 3099 ntTSL 5 BASIC18.68■□□□□ 0.58
TRBV5-3A0A0A0MS03 LHX8-202ENST00000356261 1764 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRBV5-3A0A0A0MS03 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TRBV5-3A0A0A0MS03 PARD3-210ENST00000374794 5669 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRBV5-3A0A0A0MS03 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TRBV5-3A0A0A0MS03 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRBV5-3A0A0A0MS03 TNFRSF18-201ENST00000328596 851 ntAPPRIS P4 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRBV5-3A0A0A0MS03 TNFRSF18-202ENST00000379265 705 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRBV5-3A0A0A0MS03 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
TRBV5-3A0A0A0MS03 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC18.68■□□□□ 0.58
TRBV5-3A0A0A0MS03 KRT18P11-201ENST00000435214 1283 ntBASIC18.68■□□□□ 0.58
TRBV5-3A0A0A0MS03 FRMD8-208ENST00000531296 366 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TRBV5-3A0A0A0MS03 SPI1-203ENST00000533030 661 ntTSL 2 BASIC18.68■□□□□ 0.58
TRBV5-3A0A0A0MS03 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
TRBV5-3A0A0A0MS03 ACBD4-216ENST00000619916 1276 ntTSL 5 BASIC18.68■□□□□ 0.58
TRBV5-3A0A0A0MS03 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC18.68■□□□□ 0.58
TRBV5-3A0A0A0MS03 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC18.68■□□□□ 0.58
TRBV5-3A0A0A0MS03 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRBV5-3A0A0A0MS03 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRBV5-3A0A0A0MS03 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRBV5-3A0A0A0MS03 SUN1-220ENST00000457378 1309 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
TRBV5-3A0A0A0MS03 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRBV5-3A0A0A0MS03 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
TRBV5-3A0A0A0MS03 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
TRBV5-3A0A0A0MS03 ZNF346-209ENST00000512315 1575 ntTSL 2 BASIC18.68■□□□□ 0.58
TRBV5-3A0A0A0MS03 FOXK2-201ENST00000335255 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRBV5-3A0A0A0MS03 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC18.67■□□□□ 0.58
TRBV5-3A0A0A0MS03 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRBV5-3A0A0A0MS03 AC068338.2-201ENST00000563278 1430 ntBASIC18.67■□□□□ 0.58
TRBV5-3A0A0A0MS03 ADRA1A-203ENST00000380572 1697 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TRBV5-3A0A0A0MS03 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TRBV5-3A0A0A0MS03 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC18.67■□□□□ 0.58
TRBV5-3A0A0A0MS03 GUK1-205ENST00000366722 850 ntTSL 3 BASIC18.67■□□□□ 0.58
TRBV5-3A0A0A0MS03 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC18.67■□□□□ 0.58
TRBV5-3A0A0A0MS03 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC18.67■□□□□ 0.58
TRBV5-3A0A0A0MS03 AIPL1-206ENST00000571740 1202 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRBV5-3A0A0A0MS03 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
TRBV5-3A0A0A0MS03 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
TRBV5-3A0A0A0MS03 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TRBV5-3A0A0A0MS03 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TRBV5-3A0A0A0MS03 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TRBV5-3A0A0A0MS03 DUSP18-205ENST00000404885 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRBV5-3A0A0A0MS03 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TRBV5-3A0A0A0MS03 IKBKG-214ENST00000618670 2069 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TRBV5-3A0A0A0MS03 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRBV5-3A0A0A0MS03 PPARG-202ENST00000309576 1870 ntAPPRIS ALT1 TSL 2 BASIC18.67■□□□□ 0.58
TRBV5-3A0A0A0MS03 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRBV5-3A0A0A0MS03 STK16-201ENST00000396738 1673 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
TRBV5-3A0A0A0MS03 RFXANK-201ENST00000303088 1407 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRBV5-3A0A0A0MS03 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRBV5-3A0A0A0MS03 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRBV5-3A0A0A0MS03 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC18.66■□□□□ 0.58
TRBV5-3A0A0A0MS03 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
TRBV5-3A0A0A0MS03 EEF1A2-201ENST00000217182 2006 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRBV5-3A0A0A0MS03 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRBV5-3A0A0A0MS03 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 55.4 ms