Protein–RNA interactions for Protein: Q9Y6Q6

TNFRSF11A, Tumor necrosis factor receptor superfamily member 11A, humanhuman

Predicted RBP Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11AQ9Y6Q6 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC32.13■■■□□ 2.73
TNFRSF11AQ9Y6Q6 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC32.13■■■□□ 2.73
TNFRSF11AQ9Y6Q6 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC32.12■■■□□ 2.73
TNFRSF11AQ9Y6Q6 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC32.12■■■□□ 2.73
TNFRSF11AQ9Y6Q6 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC32.12■■■□□ 2.73
TNFRSF11AQ9Y6Q6 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC32.11■■■□□ 2.73
TNFRSF11AQ9Y6Q6 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC32.1■■■□□ 2.73
TNFRSF11AQ9Y6Q6 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC32.1■■■□□ 2.73
TNFRSF11AQ9Y6Q6 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC32.1■■■□□ 2.73
TNFRSF11AQ9Y6Q6 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
TNFRSF11AQ9Y6Q6 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC32.1■■■□□ 2.73
TNFRSF11AQ9Y6Q6 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC32.09■■■□□ 2.73
TNFRSF11AQ9Y6Q6 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC32.09■■■□□ 2.73
TNFRSF11AQ9Y6Q6 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC32.08■■■□□ 2.73
TNFRSF11AQ9Y6Q6 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC32.08■■■□□ 2.73
TNFRSF11AQ9Y6Q6 EI24-212ENST00000615917 1407 ntTSL 2 BASIC32.08■■■□□ 2.73
TNFRSF11AQ9Y6Q6 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC32.07■■■□□ 2.72
TNFRSF11AQ9Y6Q6 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC32.07■■■□□ 2.72
TNFRSF11AQ9Y6Q6 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC32.06■■■□□ 2.72
TNFRSF11AQ9Y6Q6 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC32.06■■■□□ 2.72
TNFRSF11AQ9Y6Q6 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC32.06■■■□□ 2.72
TNFRSF11AQ9Y6Q6 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC32.06■■■□□ 2.72
TNFRSF11AQ9Y6Q6 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC32.05■■■□□ 2.72
TNFRSF11AQ9Y6Q6 PVT1-219ENST00000523427 938 ntTSL 3 BASIC32.05■■■□□ 2.72
TNFRSF11AQ9Y6Q6 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
TNFRSF11AQ9Y6Q6 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.72
TNFRSF11AQ9Y6Q6 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC32.04■■■□□ 2.72
TNFRSF11AQ9Y6Q6 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
TNFRSF11AQ9Y6Q6 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
TNFRSF11AQ9Y6Q6 CALM3-209ENST00000597743 577 ntTSL 4 BASIC32.02■■■□□ 2.72
TNFRSF11AQ9Y6Q6 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC32.02■■■□□ 2.72
TNFRSF11AQ9Y6Q6 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC32■■■□□ 2.71
TNFRSF11AQ9Y6Q6 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC32■■■□□ 2.71
TNFRSF11AQ9Y6Q6 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC31.99■■■□□ 2.71
TNFRSF11AQ9Y6Q6 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC31.99■■■□□ 2.71
TNFRSF11AQ9Y6Q6 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC31.99■■■□□ 2.71
TNFRSF11AQ9Y6Q6 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC31.98■■■□□ 2.71
TNFRSF11AQ9Y6Q6 LINC00273-201ENST00000539813 1452 ntBASIC31.98■■■□□ 2.71
TNFRSF11AQ9Y6Q6 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
TNFRSF11AQ9Y6Q6 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC31.98■■■□□ 2.71
TNFRSF11AQ9Y6Q6 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC31.98■■■□□ 2.71
TNFRSF11AQ9Y6Q6 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC31.98■■■□□ 2.71
TNFRSF11AQ9Y6Q6 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
TNFRSF11AQ9Y6Q6 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC31.97■■■□□ 2.71
TNFRSF11AQ9Y6Q6 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC31.97■■■□□ 2.71
TNFRSF11AQ9Y6Q6 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
TNFRSF11AQ9Y6Q6 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
TNFRSF11AQ9Y6Q6 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC31.96■■■□□ 2.71
TNFRSF11AQ9Y6Q6 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC31.96■■■□□ 2.71
TNFRSF11AQ9Y6Q6 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC31.96■■■□□ 2.71
TNFRSF11AQ9Y6Q6 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC31.95■■■□□ 2.71
TNFRSF11AQ9Y6Q6 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
TNFRSF11AQ9Y6Q6 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC31.94■■■□□ 2.7
TNFRSF11AQ9Y6Q6 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC31.93■■■□□ 2.7
TNFRSF11AQ9Y6Q6 WHAMMP2-203ENST00000563942 1603 ntBASIC31.93■■■□□ 2.7
TNFRSF11AQ9Y6Q6 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC31.93■■■□□ 2.7
TNFRSF11AQ9Y6Q6 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC31.92■■■□□ 2.7
TNFRSF11AQ9Y6Q6 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC31.92■■■□□ 2.7
TNFRSF11AQ9Y6Q6 AC135983.2-203ENST00000454486 1613 ntBASIC31.92■■■□□ 2.7
TNFRSF11AQ9Y6Q6 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC31.91■■■□□ 2.7
TNFRSF11AQ9Y6Q6 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC31.91■■■□□ 2.7
TNFRSF11AQ9Y6Q6 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC31.9■■■□□ 2.7
TNFRSF11AQ9Y6Q6 LINC01971-201ENST00000617888 1048 ntBASIC31.9■■■□□ 2.7
TNFRSF11AQ9Y6Q6 AC139426.1-201ENST00000568218 2529 ntBASIC31.89■■■□□ 2.7
TNFRSF11AQ9Y6Q6 DUX4L11-201ENST00000611504 1267 ntBASIC31.89■■■□□ 2.7
TNFRSF11AQ9Y6Q6 DUX4L12-201ENST00000614593 1267 ntBASIC31.89■■■□□ 2.7
TNFRSF11AQ9Y6Q6 DUX4L14-201ENST00000621227 1267 ntBASIC31.89■■■□□ 2.7
TNFRSF11AQ9Y6Q6 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC31.88■■■□□ 2.69
TNFRSF11AQ9Y6Q6 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC31.88■■■□□ 2.69
TNFRSF11AQ9Y6Q6 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC31.87■■■□□ 2.69
TNFRSF11AQ9Y6Q6 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC31.87■■■□□ 2.69
TNFRSF11AQ9Y6Q6 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
TNFRSF11AQ9Y6Q6 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC31.86■■■□□ 2.69
TNFRSF11AQ9Y6Q6 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
TNFRSF11AQ9Y6Q6 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
TNFRSF11AQ9Y6Q6 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC31.85■■■□□ 2.69
TNFRSF11AQ9Y6Q6 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC31.85■■■□□ 2.69
TNFRSF11AQ9Y6Q6 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
TNFRSF11AQ9Y6Q6 AL139393.2-201ENST00000608721 2025 ntBASIC31.85■■■□□ 2.69
TNFRSF11AQ9Y6Q6 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC31.85■■■□□ 2.69
TNFRSF11AQ9Y6Q6 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC31.84■■■□□ 2.69
TNFRSF11AQ9Y6Q6 RPS2-202ENST00000526522 924 ntTSL 2 BASIC31.84■■■□□ 2.69
TNFRSF11AQ9Y6Q6 RNF166-209ENST00000567844 633 ntTSL 5 BASIC31.84■■■□□ 2.69
TNFRSF11AQ9Y6Q6 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
TNFRSF11AQ9Y6Q6 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC31.84■■■□□ 2.69
TNFRSF11AQ9Y6Q6 CR559946.2-201ENST00000623684 991 ntBASIC31.83■■■□□ 2.69
TNFRSF11AQ9Y6Q6 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC31.83■■■□□ 2.69
TNFRSF11AQ9Y6Q6 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC31.82■■■□□ 2.68
TNFRSF11AQ9Y6Q6 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC31.81■■■□□ 2.68
TNFRSF11AQ9Y6Q6 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC31.81■■■□□ 2.68
TNFRSF11AQ9Y6Q6 CAPNS1-211ENST00000590874 926 ntTSL 5 BASIC31.8■■■□□ 2.68
TNFRSF11AQ9Y6Q6 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC31.79■■■□□ 2.68
TNFRSF11AQ9Y6Q6 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC31.79■■■□□ 2.68
TNFRSF11AQ9Y6Q6 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
TNFRSF11AQ9Y6Q6 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC31.78■■■□□ 2.68
TNFRSF11AQ9Y6Q6 MIR3648-2-201ENST00000581792 180 ntBASIC31.78■■■□□ 2.68
TNFRSF11AQ9Y6Q6 MIR3648-1-201ENST00000615959 180 ntBASIC31.78■■■□□ 2.68
TNFRSF11AQ9Y6Q6 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC31.78■■■□□ 2.68
TNFRSF11AQ9Y6Q6 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC31.77■■■□□ 2.68
TNFRSF11AQ9Y6Q6 WNT5A-AS1-201ENST00000469484 500 ntTSL 3 BASIC31.77■■■□□ 2.68
Retrieved 100 of 98,524 protein–RNA pairs in 15 ms