Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 PRELID2-202ENST00000394450 1102 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
RCL1Q9Y2P8 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
RCL1Q9Y2P8 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC21.1■□□□□ 0.97
RCL1Q9Y2P8 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
RCL1Q9Y2P8 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC21.09■□□□□ 0.97
RCL1Q9Y2P8 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
RCL1Q9Y2P8 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
RCL1Q9Y2P8 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC21.09■□□□□ 0.97
RCL1Q9Y2P8 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
RCL1Q9Y2P8 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC21.08■□□□□ 0.97
RCL1Q9Y2P8 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC21.08■□□□□ 0.97
RCL1Q9Y2P8 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC21.08■□□□□ 0.96
RCL1Q9Y2P8 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC21.08■□□□□ 0.96
RCL1Q9Y2P8 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.07■□□□□ 0.96
RCL1Q9Y2P8 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC21.07■□□□□ 0.96
RCL1Q9Y2P8 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RCL1Q9Y2P8 RNF150-204ENST00000507500 1530 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
RCL1Q9Y2P8 BX255925.1-201ENST00000566954 1854 ntBASIC21.07■□□□□ 0.96
RCL1Q9Y2P8 MXD3-203ENST00000439742 1483 ntAPPRIS P1 TSL 1 (best) BASIC21.07■□□□□ 0.96
RCL1Q9Y2P8 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC21.06■□□□□ 0.96
RCL1Q9Y2P8 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RCL1Q9Y2P8 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC21.06■□□□□ 0.96
RCL1Q9Y2P8 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
RCL1Q9Y2P8 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC21.06■□□□□ 0.96
RCL1Q9Y2P8 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC21.06■□□□□ 0.96
RCL1Q9Y2P8 FAM89B-201ENST00000316409 1409 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RCL1Q9Y2P8 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RCL1Q9Y2P8 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC21.05■□□□□ 0.96
RCL1Q9Y2P8 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC21.05■□□□□ 0.96
RCL1Q9Y2P8 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RCL1Q9Y2P8 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RCL1Q9Y2P8 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
RCL1Q9Y2P8 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
RCL1Q9Y2P8 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RCL1Q9Y2P8 SAP30-201ENST00000296504 1108 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
RCL1Q9Y2P8 SLC9A3R2-202ENST00000432365 1564 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
RCL1Q9Y2P8 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC21.04■□□□□ 0.96
RCL1Q9Y2P8 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC21.03■□□□□ 0.96
RCL1Q9Y2P8 HMGB1-205ENST00000399494 1282 ntAPPRIS P1 TSL 2 BASIC21.03■□□□□ 0.96
RCL1Q9Y2P8 ZNRF2P1-201ENST00000441407 443 ntBASIC21.03■□□□□ 0.96
RCL1Q9Y2P8 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC21.03■□□□□ 0.96
RCL1Q9Y2P8 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
RCL1Q9Y2P8 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RCL1Q9Y2P8 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RCL1Q9Y2P8 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.96
RCL1Q9Y2P8 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.96
RCL1Q9Y2P8 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC21.01■□□□□ 0.95
RCL1Q9Y2P8 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC21■□□□□ 0.95
RCL1Q9Y2P8 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC21■□□□□ 0.95
RCL1Q9Y2P8 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
RCL1Q9Y2P8 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
RCL1Q9Y2P8 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
RCL1Q9Y2P8 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
RCL1Q9Y2P8 AL031258.1-201ENST00000623562 325 ntBASIC20.99■□□□□ 0.95
RCL1Q9Y2P8 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC20.98■□□□□ 0.95
RCL1Q9Y2P8 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC20.97■□□□□ 0.95
RCL1Q9Y2P8 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
RCL1Q9Y2P8 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC20.97■□□□□ 0.95
RCL1Q9Y2P8 AC010864.1-201ENST00000609407 1511 ntBASIC20.97■□□□□ 0.95
RCL1Q9Y2P8 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC20.97■□□□□ 0.95
RCL1Q9Y2P8 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC20.96■□□□□ 0.95
RCL1Q9Y2P8 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC20.96■□□□□ 0.95
RCL1Q9Y2P8 SSBP4-206ENST00000599699 793 ntTSL 2 BASIC20.96■□□□□ 0.95
RCL1Q9Y2P8 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
RCL1Q9Y2P8 SHF-208ENST00000560734 1731 ntTSL 3 BASIC20.95■□□□□ 0.94
RCL1Q9Y2P8 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
RCL1Q9Y2P8 NKX1-1-201ENST00000422806 1236 ntAPPRIS P1 TSL 5 BASIC20.95■□□□□ 0.94
RCL1Q9Y2P8 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC20.95■□□□□ 0.94
RCL1Q9Y2P8 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
RCL1Q9Y2P8 ZSWIM6-201ENST00000252744 5501 ntAPPRIS P1 TSL 5 BASIC20.94■□□□□ 0.94
RCL1Q9Y2P8 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
RCL1Q9Y2P8 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC20.94■□□□□ 0.94
RCL1Q9Y2P8 PROC-203ENST00000409048 1586 ntTSL 5 BASIC20.94■□□□□ 0.94
RCL1Q9Y2P8 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC20.94■□□□□ 0.94
RCL1Q9Y2P8 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC20.94■□□□□ 0.94
RCL1Q9Y2P8 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.94■□□□□ 0.94
RCL1Q9Y2P8 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RCL1Q9Y2P8 WASH5P-204ENST00000632292 975 ntBASIC20.93■□□□□ 0.94
RCL1Q9Y2P8 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.93■□□□□ 0.94
RCL1Q9Y2P8 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
RCL1Q9Y2P8 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.94
RCL1Q9Y2P8 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC20.92■□□□□ 0.94
RCL1Q9Y2P8 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RCL1Q9Y2P8 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC20.92■□□□□ 0.94
RCL1Q9Y2P8 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
RCL1Q9Y2P8 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC20.92■□□□□ 0.94
RCL1Q9Y2P8 MSX2-202ENST00000507785 1188 ntTSL 2 BASIC20.91■□□□□ 0.94
RCL1Q9Y2P8 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC20.91■□□□□ 0.94
RCL1Q9Y2P8 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC20.91■□□□□ 0.94
RCL1Q9Y2P8 QKI-207ENST00000453779 5685 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
RCL1Q9Y2P8 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RCL1Q9Y2P8 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC20.9■□□□□ 0.94
RCL1Q9Y2P8 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC20.9■□□□□ 0.94
RCL1Q9Y2P8 AP001107.7-201ENST00000533287 272 ntTSL 2 BASIC20.9■□□□□ 0.94
RCL1Q9Y2P8 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RCL1Q9Y2P8 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RCL1Q9Y2P8 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC20.9■□□□□ 0.94
RCL1Q9Y2P8 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
RCL1Q9Y2P8 AL449106.1-201ENST00000608517 1980 ntBASIC20.9■□□□□ 0.94
RCL1Q9Y2P8 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC20.89■□□□□ 0.93
Retrieved 100 of 98,524 protein–RNA pairs in 13.7 ms