Protein–RNA interactions for Protein: Q9UQV4

LAMP3, Lysosome-associated membrane glycoprotein 3, humanhuman

Predictions only

Length 416 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LAMP3Q9UQV4 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC22.48■■□□□ 1.19
LAMP3Q9UQV4 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC22.48■■□□□ 1.19
LAMP3Q9UQV4 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC22.47■■□□□ 1.19
LAMP3Q9UQV4 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC22.47■■□□□ 1.19
LAMP3Q9UQV4 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC22.47■■□□□ 1.19
LAMP3Q9UQV4 DUX4L13-201ENST00000554103 1267 ntBASIC22.46■■□□□ 1.19
LAMP3Q9UQV4 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC22.46■■□□□ 1.19
LAMP3Q9UQV4 DUX4L15-201ENST00000611059 1267 ntBASIC22.46■■□□□ 1.19
LAMP3Q9UQV4 DUX4L23-201ENST00000615195 1269 ntBASIC22.46■■□□□ 1.19
LAMP3Q9UQV4 DUX4L24-201ENST00000617576 1269 ntBASIC22.46■■□□□ 1.19
LAMP3Q9UQV4 DUX4L22-201ENST00000618238 1269 ntBASIC22.46■■□□□ 1.19
LAMP3Q9UQV4 DUX4L20-201ENST00000619712 1269 ntBASIC22.46■■□□□ 1.19
LAMP3Q9UQV4 DUX4L21-201ENST00000622058 1269 ntBASIC22.46■■□□□ 1.19
LAMP3Q9UQV4 DUX4L10-201ENST00000622460 1267 ntBASIC22.46■■□□□ 1.19
LAMP3Q9UQV4 DUX4L25-201ENST00000624915 1269 ntBASIC22.46■■□□□ 1.19
LAMP3Q9UQV4 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
LAMP3Q9UQV4 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
LAMP3Q9UQV4 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
LAMP3Q9UQV4 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC22.45■■□□□ 1.18
LAMP3Q9UQV4 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC22.45■■□□□ 1.18
LAMP3Q9UQV4 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
LAMP3Q9UQV4 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC22.44■■□□□ 1.18
LAMP3Q9UQV4 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
LAMP3Q9UQV4 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
LAMP3Q9UQV4 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
LAMP3Q9UQV4 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC22.43■■□□□ 1.18
LAMP3Q9UQV4 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC22.43■■□□□ 1.18
LAMP3Q9UQV4 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC22.42■■□□□ 1.18
LAMP3Q9UQV4 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC22.41■■□□□ 1.18
LAMP3Q9UQV4 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC22.41■■□□□ 1.18
LAMP3Q9UQV4 HSD17B1P1-201ENST00000590052 955 ntBASIC22.41■■□□□ 1.18
LAMP3Q9UQV4 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC22.41■■□□□ 1.18
LAMP3Q9UQV4 CIC-201ENST00000160740 6111 ntAPPRIS ALT1 TSL 5 BASIC22.4■■□□□ 1.18
LAMP3Q9UQV4 HES6-205ENST00000409356 528 ntTSL 2 BASIC22.4■■□□□ 1.18
LAMP3Q9UQV4 METRNL-202ENST00000570778 967 ntTSL 5 BASIC22.4■■□□□ 1.18
LAMP3Q9UQV4 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC22.4■■□□□ 1.18
LAMP3Q9UQV4 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC22.4■■□□□ 1.18
LAMP3Q9UQV4 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC22.39■■□□□ 1.17
LAMP3Q9UQV4 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC22.39■■□□□ 1.17
LAMP3Q9UQV4 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC22.39■■□□□ 1.17
LAMP3Q9UQV4 CHML-204ENST00000638121 920 ntTSL 2 BASIC22.39■■□□□ 1.17
LAMP3Q9UQV4 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC22.38■■□□□ 1.17
LAMP3Q9UQV4 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC22.38■■□□□ 1.17
LAMP3Q9UQV4 ABHD17AP3-201ENST00000503096 1137 ntBASIC22.38■■□□□ 1.17
LAMP3Q9UQV4 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC22.38■■□□□ 1.17
LAMP3Q9UQV4 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
LAMP3Q9UQV4 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC22.36■■□□□ 1.17
LAMP3Q9UQV4 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC22.36■■□□□ 1.17
LAMP3Q9UQV4 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC22.35■■□□□ 1.17
LAMP3Q9UQV4 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC22.34■■□□□ 1.17
LAMP3Q9UQV4 BRD4-212ENST00000630599 726 ntTSL 2 BASIC22.34■■□□□ 1.17
LAMP3Q9UQV4 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC22.33■■□□□ 1.16
LAMP3Q9UQV4 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC22.32■■□□□ 1.16
LAMP3Q9UQV4 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC22.32■■□□□ 1.16
LAMP3Q9UQV4 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC22.32■■□□□ 1.16
LAMP3Q9UQV4 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC22.32■■□□□ 1.16
LAMP3Q9UQV4 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC22.32■■□□□ 1.16
LAMP3Q9UQV4 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC22.32■■□□□ 1.16
LAMP3Q9UQV4 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC22.32■■□□□ 1.16
LAMP3Q9UQV4 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC22.32■■□□□ 1.16
LAMP3Q9UQV4 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC22.31■■□□□ 1.16
LAMP3Q9UQV4 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC22.31■■□□□ 1.16
LAMP3Q9UQV4 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC22.31■■□□□ 1.16
LAMP3Q9UQV4 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC22.3■■□□□ 1.16
LAMP3Q9UQV4 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC22.3■■□□□ 1.16
LAMP3Q9UQV4 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC22.3■■□□□ 1.16
LAMP3Q9UQV4 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
LAMP3Q9UQV4 AC010864.1-201ENST00000609407 1511 ntBASIC22.3■■□□□ 1.16
LAMP3Q9UQV4 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC22.3■■□□□ 1.16
LAMP3Q9UQV4 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC22.3■■□□□ 1.16
LAMP3Q9UQV4 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC22.29■■□□□ 1.16
LAMP3Q9UQV4 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC22.29■■□□□ 1.16
LAMP3Q9UQV4 CHST11-202ENST00000546689 756 ntTSL 2 BASIC22.29■■□□□ 1.16
LAMP3Q9UQV4 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC22.29■■□□□ 1.16
LAMP3Q9UQV4 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC22.28■■□□□ 1.16
LAMP3Q9UQV4 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC22.28■■□□□ 1.16
LAMP3Q9UQV4 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC22.28■■□□□ 1.16
LAMP3Q9UQV4 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
LAMP3Q9UQV4 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC22.27■■□□□ 1.16
LAMP3Q9UQV4 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
LAMP3Q9UQV4 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
LAMP3Q9UQV4 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
LAMP3Q9UQV4 LINC00273-201ENST00000539813 1452 ntBASIC22.26■■□□□ 1.15
LAMP3Q9UQV4 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
LAMP3Q9UQV4 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC22.25■■□□□ 1.15
LAMP3Q9UQV4 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC22.25■■□□□ 1.15
LAMP3Q9UQV4 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC22.25■■□□□ 1.15
LAMP3Q9UQV4 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC22.25■■□□□ 1.15
LAMP3Q9UQV4 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC22.25■■□□□ 1.15
LAMP3Q9UQV4 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC22.25■■□□□ 1.15
LAMP3Q9UQV4 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
LAMP3Q9UQV4 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
LAMP3Q9UQV4 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC22.24■■□□□ 1.15
LAMP3Q9UQV4 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
LAMP3Q9UQV4 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
LAMP3Q9UQV4 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
LAMP3Q9UQV4 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC22.23■■□□□ 1.15
LAMP3Q9UQV4 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC22.23■■□□□ 1.15
LAMP3Q9UQV4 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
LAMP3Q9UQV4 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC22.22■■□□□ 1.15
Retrieved 100 of 98,524 protein–RNA pairs in 12.5 ms