Protein–RNA interactions for Protein: Q9UQ88

CDK11A, Cyclin-dependent kinase 11A, humanhuman

Predicted RBP Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11AQ9UQ88 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC40.97■■■■■ 4.15
CDK11AQ9UQ88 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC40.97■■■■■ 4.15
CDK11AQ9UQ88 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC40.97■■■■■ 4.15
CDK11AQ9UQ88 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC40.96■■■■■ 4.15
CDK11AQ9UQ88 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC40.94■■■■■ 4.14
CDK11AQ9UQ88 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC40.94■■■■■ 4.14
CDK11AQ9UQ88 CHST11-202ENST00000546689 756 ntTSL 2 BASIC40.92■■■■■ 4.14
CDK11AQ9UQ88 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC40.92■■■■■ 4.14
CDK11AQ9UQ88 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC40.9■■■■■ 4.14
CDK11AQ9UQ88 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC40.9■■■■■ 4.14
CDK11AQ9UQ88 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC40.89■■■■■ 4.14
CDK11AQ9UQ88 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC40.88■■■■■ 4.13
CDK11AQ9UQ88 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC40.86■■■■■ 4.13
CDK11AQ9UQ88 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC40.86■■■■■ 4.13
CDK11AQ9UQ88 AC010864.1-201ENST00000609407 1511 ntBASIC40.86■■■■■ 4.13
CDK11AQ9UQ88 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC40.84■■■■■ 4.13
CDK11AQ9UQ88 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC40.84■■■■■ 4.13
CDK11AQ9UQ88 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC40.83■■■■■ 4.13
CDK11AQ9UQ88 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC40.83■■■■■ 4.13
CDK11AQ9UQ88 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC40.83■■■■■ 4.13
CDK11AQ9UQ88 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC40.83■■■■■ 4.13
CDK11AQ9UQ88 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC40.82■■■■■ 4.13
CDK11AQ9UQ88 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC40.82■■■■■ 4.13
CDK11AQ9UQ88 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC40.82■■■■■ 4.13
CDK11AQ9UQ88 CSPG5-205ENST00000610462 2073 ntTSL 5 BASIC40.81■■■■■ 4.12
CDK11AQ9UQ88 RARRES2P2-201ENST00000394842 485 ntBASIC40.81■■■■■ 4.12
CDK11AQ9UQ88 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC40.81■■■■■ 4.12
CDK11AQ9UQ88 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC40.8■■■■■ 4.12
CDK11AQ9UQ88 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC40.79■■■■■ 4.12
CDK11AQ9UQ88 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC40.78■■■■■ 4.12
CDK11AQ9UQ88 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC40.78■■■■■ 4.12
CDK11AQ9UQ88 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC40.76■■■■■ 4.12
CDK11AQ9UQ88 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC40.75■■■■■ 4.11
CDK11AQ9UQ88 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC40.75■■■■■ 4.11
CDK11AQ9UQ88 TPT1-202ENST00000379055 948 ntTSL 2 BASIC40.74■■■■■ 4.11
CDK11AQ9UQ88 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC40.74■■■■■ 4.11
CDK11AQ9UQ88 GPX1-201ENST00000419349 1106 ntBASIC40.74■■■■■ 4.11
CDK11AQ9UQ88 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC40.74■■■■■ 4.11
CDK11AQ9UQ88 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC40.73■■■■■ 4.11
CDK11AQ9UQ88 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC40.73■■■■■ 4.11
CDK11AQ9UQ88 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC40.72■■■■■ 4.11
CDK11AQ9UQ88 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC40.72■■■■■ 4.11
CDK11AQ9UQ88 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC40.72■■■■■ 4.11
CDK11AQ9UQ88 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC40.71■■■■■ 4.11
CDK11AQ9UQ88 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC40.69■■■■■ 4.1
CDK11AQ9UQ88 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC40.69■■■■■ 4.1
CDK11AQ9UQ88 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC40.69■■■■■ 4.1
CDK11AQ9UQ88 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC40.68■■■■■ 4.1
CDK11AQ9UQ88 ABHD17AP5-201ENST00000580133 923 ntBASIC40.68■■■■■ 4.1
CDK11AQ9UQ88 RNF126P1-201ENST00000567452 1320 ntBASIC40.67■■■■■ 4.1
CDK11AQ9UQ88 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC40.67■■■■■ 4.1
CDK11AQ9UQ88 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC40.67■■■■■ 4.1
CDK11AQ9UQ88 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC40.67■■■■■ 4.1
CDK11AQ9UQ88 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC40.67■■■■■ 4.1
CDK11AQ9UQ88 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC40.64■■■■■ 4.1
CDK11AQ9UQ88 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC40.64■■■■■ 4.1
CDK11AQ9UQ88 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC40.63■■■■■ 4.09
CDK11AQ9UQ88 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC40.63■■■■■ 4.09
CDK11AQ9UQ88 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC40.61■■■■■ 4.09
CDK11AQ9UQ88 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC40.6■■■■■ 4.09
CDK11AQ9UQ88 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC40.59■■■■■ 4.09
CDK11AQ9UQ88 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC40.58■■■■■ 4.09
CDK11AQ9UQ88 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC40.57■■■■■ 4.09
CDK11AQ9UQ88 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC40.57■■■■■ 4.09
CDK11AQ9UQ88 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC40.56■■■■■ 4.08
CDK11AQ9UQ88 SULT4A1-201ENST00000330884 2468 ntAPPRIS P1 TSL 1 (best) BASIC40.56■■■■■ 4.08
CDK11AQ9UQ88 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC40.56■■■■■ 4.08
CDK11AQ9UQ88 CEP120-209ENST00000515110 606 ntTSL 3 BASIC40.55■■■■■ 4.08
CDK11AQ9UQ88 AC008813.1-201ENST00000536597 885 ntBASIC40.55■■■■■ 4.08
CDK11AQ9UQ88 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC40.55■■■■■ 4.08
CDK11AQ9UQ88 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC40.54■■■■■ 4.08
CDK11AQ9UQ88 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC40.54■■■■■ 4.08
CDK11AQ9UQ88 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC40.54■■■■■ 4.08
CDK11AQ9UQ88 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC40.53■■■■■ 4.08
CDK11AQ9UQ88 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC40.52■■■■■ 4.08
CDK11AQ9UQ88 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC40.52■■■■■ 4.08
CDK11AQ9UQ88 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC40.52■■■■■ 4.08
CDK11AQ9UQ88 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC40.52■■■■■ 4.08
CDK11AQ9UQ88 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC40.51■■■■■ 4.08
CDK11AQ9UQ88 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC40.51■■■■■ 4.08
CDK11AQ9UQ88 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC40.51■■■■■ 4.08
CDK11AQ9UQ88 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC40.5■■■■■ 4.07
CDK11AQ9UQ88 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC40.5■■■■■ 4.07
CDK11AQ9UQ88 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC40.49■■■■■ 4.07
CDK11AQ9UQ88 AC127502.1-201ENST00000399971 1502 ntBASIC40.47■■■■■ 4.07
CDK11AQ9UQ88 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC40.47■■■■■ 4.07
CDK11AQ9UQ88 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC40.47■■■■■ 4.07
CDK11AQ9UQ88 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC40.46■■■■■ 4.07
CDK11AQ9UQ88 AC135983.2-203ENST00000454486 1613 ntBASIC40.46■■■■■ 4.07
CDK11AQ9UQ88 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC40.45■■■■■ 4.07
CDK11AQ9UQ88 AC022413.1-201ENST00000624602 984 ntBASIC40.44■■■■■ 4.06
CDK11AQ9UQ88 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC40.44■■■■■ 4.06
CDK11AQ9UQ88 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC40.42■■■■■ 4.06
CDK11AQ9UQ88 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC40.42■■■■■ 4.06
CDK11AQ9UQ88 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC40.42■■■■■ 4.06
CDK11AQ9UQ88 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC40.42■■■■■ 4.06
CDK11AQ9UQ88 WHAMMP2-203ENST00000563942 1603 ntBASIC40.41■■■■■ 4.06
CDK11AQ9UQ88 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC40.4■■■■■ 4.06
CDK11AQ9UQ88 HES4-202ENST00000428771 1040 ntTSL 2 BASIC40.4■■■■■ 4.06
CDK11AQ9UQ88 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC40.4■■■■■ 4.06
Retrieved 100 of 98,524 protein–RNA pairs in 8.6 ms