Protein–RNA interactions for Protein: Q9NUP9

LIN7C, Protein lin-7 homolog C, humanhuman

Known RBP Predictions only

Length 197 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIN7CQ9NUP9 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC21.39■■□□□ 1.01
LIN7CQ9NUP9 DRD5P2-201ENST00000421395 2012 ntBASIC21.39■■□□□ 1.01
LIN7CQ9NUP9 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC21.38■■□□□ 1.01
LIN7CQ9NUP9 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC21.38■■□□□ 1.01
LIN7CQ9NUP9 SSU72-201ENST00000291386 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.38■■□□□ 1.01
LIN7CQ9NUP9 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC21.38■■□□□ 1.01
LIN7CQ9NUP9 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC21.38■■□□□ 1.01
LIN7CQ9NUP9 AC010864.1-201ENST00000609407 1511 ntBASIC21.37■■□□□ 1.01
LIN7CQ9NUP9 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
LIN7CQ9NUP9 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC21.37■■□□□ 1.01
LIN7CQ9NUP9 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC21.36■■□□□ 1.01
LIN7CQ9NUP9 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
LIN7CQ9NUP9 FAM78B-202ENST00000354422 1475 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
LIN7CQ9NUP9 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
LIN7CQ9NUP9 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC21.35■■□□□ 1.01
LIN7CQ9NUP9 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC21.35■■□□□ 1.01
LIN7CQ9NUP9 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC21.34■■□□□ 1.01
LIN7CQ9NUP9 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
LIN7CQ9NUP9 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
LIN7CQ9NUP9 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC21.34■■□□□ 1.01
LIN7CQ9NUP9 HNRNPLP2-201ENST00000568980 1570 ntBASIC21.33■■□□□ 1.01
LIN7CQ9NUP9 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
LIN7CQ9NUP9 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
LIN7CQ9NUP9 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
LIN7CQ9NUP9 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC21.32■■□□□ 1
LIN7CQ9NUP9 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC21.32■■□□□ 1
LIN7CQ9NUP9 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
LIN7CQ9NUP9 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
LIN7CQ9NUP9 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC21.31■■□□□ 1
LIN7CQ9NUP9 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC21.31■■□□□ 1
LIN7CQ9NUP9 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC21.31■■□□□ 1
LIN7CQ9NUP9 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC21.3■■□□□ 1
LIN7CQ9NUP9 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.3■■□□□ 1
LIN7CQ9NUP9 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC21.29■■□□□ 1
LIN7CQ9NUP9 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC21.29■■□□□ 1
LIN7CQ9NUP9 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC21.29■■□□□ 1
LIN7CQ9NUP9 CHML-205ENST00000638160 705 ntTSL 3 BASIC21.29■■□□□ 1
LIN7CQ9NUP9 CRIP1-201ENST00000330233 1311 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
LIN7CQ9NUP9 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC21.29■■□□□ 1
LIN7CQ9NUP9 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC21.29■■□□□ 1
LIN7CQ9NUP9 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC21.27■■□□□ 1
LIN7CQ9NUP9 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC21.27■■□□□ 1
LIN7CQ9NUP9 MIR762-201ENST00000390236 83 ntBASIC21.27■■□□□ 1
LIN7CQ9NUP9 AP006261.1-201ENST00000584783 668 ntBASIC21.27■■□□□ 1
LIN7CQ9NUP9 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC21.27■■□□□ 1
LIN7CQ9NUP9 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC21.27■□□□□ 0.99
LIN7CQ9NUP9 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC21.27■□□□□ 0.99
LIN7CQ9NUP9 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC21.25■□□□□ 0.99
LIN7CQ9NUP9 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
LIN7CQ9NUP9 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC21.25■□□□□ 0.99
LIN7CQ9NUP9 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
LIN7CQ9NUP9 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
LIN7CQ9NUP9 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC21.24■□□□□ 0.99
LIN7CQ9NUP9 IFFO2-203ENST00000455833 6188 ntAPPRIS P1 TSL 5 BASIC21.24■□□□□ 0.99
LIN7CQ9NUP9 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC21.24■□□□□ 0.99
LIN7CQ9NUP9 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC21.23■□□□□ 0.99
LIN7CQ9NUP9 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
LIN7CQ9NUP9 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
LIN7CQ9NUP9 UBE2L6-201ENST00000287156 1354 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
LIN7CQ9NUP9 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
LIN7CQ9NUP9 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC21.21■□□□□ 0.99
LIN7CQ9NUP9 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC21.21■□□□□ 0.99
LIN7CQ9NUP9 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC21.21■□□□□ 0.99
LIN7CQ9NUP9 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
LIN7CQ9NUP9 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC21.21■□□□□ 0.99
LIN7CQ9NUP9 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
LIN7CQ9NUP9 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
LIN7CQ9NUP9 AC005559.1-201ENST00000589661 871 ntBASIC21.2■□□□□ 0.98
LIN7CQ9NUP9 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
LIN7CQ9NUP9 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LIN7CQ9NUP9 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LIN7CQ9NUP9 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
LIN7CQ9NUP9 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC21.19■□□□□ 0.98
LIN7CQ9NUP9 MIR3665-201ENST00000578708 105 ntBASIC21.19■□□□□ 0.98
LIN7CQ9NUP9 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LIN7CQ9NUP9 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
LIN7CQ9NUP9 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LIN7CQ9NUP9 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LIN7CQ9NUP9 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
LIN7CQ9NUP9 AP004833.2-201ENST00000532228 1454 ntBASIC21.18■□□□□ 0.98
LIN7CQ9NUP9 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LIN7CQ9NUP9 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
LIN7CQ9NUP9 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
LIN7CQ9NUP9 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC21.17■□□□□ 0.98
LIN7CQ9NUP9 STUB1-201ENST00000219548 1472 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
LIN7CQ9NUP9 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC21.17■□□□□ 0.98
LIN7CQ9NUP9 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC21.17■□□□□ 0.98
LIN7CQ9NUP9 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
LIN7CQ9NUP9 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
LIN7CQ9NUP9 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC21.16■□□□□ 0.98
LIN7CQ9NUP9 AL121749.1-202ENST00000609313 2153 ntBASIC21.16■□□□□ 0.98
LIN7CQ9NUP9 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
LIN7CQ9NUP9 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC21.16■□□□□ 0.98
LIN7CQ9NUP9 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
LIN7CQ9NUP9 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC21.15■□□□□ 0.98
LIN7CQ9NUP9 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
LIN7CQ9NUP9 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.15■□□□□ 0.98
LIN7CQ9NUP9 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC21.15■□□□□ 0.98
LIN7CQ9NUP9 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC21.15■□□□□ 0.98
LIN7CQ9NUP9 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
Retrieved 100 of 98,524 protein–RNA pairs in 72.8 ms