Protein–RNA interactions for Protein: Q9H3M9

ATXN3L, Ataxin-3-like protein, humanhuman

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3LQ9H3M9 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC27.41■■□□□ 1.98
ATXN3LQ9H3M9 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC27.41■■□□□ 1.98
ATXN3LQ9H3M9 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
ATXN3LQ9H3M9 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC27.4■■□□□ 1.98
ATXN3LQ9H3M9 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC27.4■■□□□ 1.98
ATXN3LQ9H3M9 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC27.4■■□□□ 1.98
ATXN3LQ9H3M9 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC27.39■■□□□ 1.98
ATXN3LQ9H3M9 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC27.39■■□□□ 1.98
ATXN3LQ9H3M9 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC27.39■■□□□ 1.98
ATXN3LQ9H3M9 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC27.39■■□□□ 1.98
ATXN3LQ9H3M9 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC27.39■■□□□ 1.98
ATXN3LQ9H3M9 FEZF2-202ENST00000475839 1918 ntAPPRIS P1 TSL 1 (best) BASIC27.39■■□□□ 1.97
ATXN3LQ9H3M9 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC27.38■■□□□ 1.97
ATXN3LQ9H3M9 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC27.38■■□□□ 1.97
ATXN3LQ9H3M9 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC27.38■■□□□ 1.97
ATXN3LQ9H3M9 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
ATXN3LQ9H3M9 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
ATXN3LQ9H3M9 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC27.37■■□□□ 1.97
ATXN3LQ9H3M9 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC27.36■■□□□ 1.97
ATXN3LQ9H3M9 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC27.36■■□□□ 1.97
ATXN3LQ9H3M9 CHML-204ENST00000638121 920 ntTSL 2 BASIC27.36■■□□□ 1.97
ATXN3LQ9H3M9 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC27.35■■□□□ 1.97
ATXN3LQ9H3M9 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC27.35■■□□□ 1.97
ATXN3LQ9H3M9 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC27.35■■□□□ 1.97
ATXN3LQ9H3M9 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC27.35■■□□□ 1.97
ATXN3LQ9H3M9 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
ATXN3LQ9H3M9 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC27.34■■□□□ 1.97
ATXN3LQ9H3M9 HES6-205ENST00000409356 528 ntTSL 2 BASIC27.34■■□□□ 1.97
ATXN3LQ9H3M9 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC27.34■■□□□ 1.97
ATXN3LQ9H3M9 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC27.34■■□□□ 1.97
ATXN3LQ9H3M9 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC27.33■■□□□ 1.97
ATXN3LQ9H3M9 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC27.33■■□□□ 1.97
ATXN3LQ9H3M9 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC27.32■■□□□ 1.96
ATXN3LQ9H3M9 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC27.32■■□□□ 1.96
ATXN3LQ9H3M9 METRNL-202ENST00000570778 967 ntTSL 5 BASIC27.32■■□□□ 1.96
ATXN3LQ9H3M9 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.96
ATXN3LQ9H3M9 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC27.3■■□□□ 1.96
ATXN3LQ9H3M9 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC27.3■■□□□ 1.96
ATXN3LQ9H3M9 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC27.29■■□□□ 1.96
ATXN3LQ9H3M9 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC27.29■■□□□ 1.96
ATXN3LQ9H3M9 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
ATXN3LQ9H3M9 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC27.28■■□□□ 1.96
ATXN3LQ9H3M9 LINC00273-201ENST00000539813 1452 ntBASIC27.28■■□□□ 1.96
ATXN3LQ9H3M9 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC27.28■■□□□ 1.96
ATXN3LQ9H3M9 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC27.28■■□□□ 1.96
ATXN3LQ9H3M9 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC27.28■■□□□ 1.96
ATXN3LQ9H3M9 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC27.27■■□□□ 1.96
ATXN3LQ9H3M9 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC27.26■■□□□ 1.95
ATXN3LQ9H3M9 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC27.26■■□□□ 1.95
ATXN3LQ9H3M9 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC27.26■■□□□ 1.95
ATXN3LQ9H3M9 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
ATXN3LQ9H3M9 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC27.25■■□□□ 1.95
ATXN3LQ9H3M9 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC27.25■■□□□ 1.95
ATXN3LQ9H3M9 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC27.25■■□□□ 1.95
ATXN3LQ9H3M9 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC27.24■■□□□ 1.95
ATXN3LQ9H3M9 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC27.24■■□□□ 1.95
ATXN3LQ9H3M9 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC27.22■■□□□ 1.95
ATXN3LQ9H3M9 CHST11-202ENST00000546689 756 ntTSL 2 BASIC27.22■■□□□ 1.95
ATXN3LQ9H3M9 HSD17B1P1-201ENST00000590052 955 ntBASIC27.22■■□□□ 1.95
ATXN3LQ9H3M9 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC27.21■■□□□ 1.95
ATXN3LQ9H3M9 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC27.2■■□□□ 1.94
ATXN3LQ9H3M9 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC27.19■■□□□ 1.94
ATXN3LQ9H3M9 ABHD17AP3-201ENST00000503096 1137 ntBASIC27.19■■□□□ 1.94
ATXN3LQ9H3M9 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC27.19■■□□□ 1.94
ATXN3LQ9H3M9 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC27.19■■□□□ 1.94
ATXN3LQ9H3M9 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC27.19■■□□□ 1.94
ATXN3LQ9H3M9 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC27.18■■□□□ 1.94
ATXN3LQ9H3M9 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC27.18■■□□□ 1.94
ATXN3LQ9H3M9 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC27.18■■□□□ 1.94
ATXN3LQ9H3M9 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC27.18■■□□□ 1.94
ATXN3LQ9H3M9 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC27.16■■□□□ 1.94
ATXN3LQ9H3M9 AC127502.1-201ENST00000399971 1502 ntBASIC27.16■■□□□ 1.94
ATXN3LQ9H3M9 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC27.15■■□□□ 1.94
ATXN3LQ9H3M9 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC27.14■■□□□ 1.94
ATXN3LQ9H3M9 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC27.14■■□□□ 1.94
ATXN3LQ9H3M9 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC27.14■■□□□ 1.94
ATXN3LQ9H3M9 AL135925.1-201ENST00000605920 1701 ntBASIC27.14■■□□□ 1.94
ATXN3LQ9H3M9 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC27.14■■□□□ 1.94
ATXN3LQ9H3M9 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC27.14■■□□□ 1.94
ATXN3LQ9H3M9 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC27.14■■□□□ 1.94
ATXN3LQ9H3M9 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
ATXN3LQ9H3M9 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC27.13■■□□□ 1.93
ATXN3LQ9H3M9 FTCD-204ENST00000397748 1955 ntTSL 1 (best) BASIC27.13■■□□□ 1.93
ATXN3LQ9H3M9 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC27.11■■□□□ 1.93
ATXN3LQ9H3M9 BRD4-212ENST00000630599 726 ntTSL 2 BASIC27.11■■□□□ 1.93
ATXN3LQ9H3M9 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC27.1■■□□□ 1.93
ATXN3LQ9H3M9 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC27.09■■□□□ 1.93
ATXN3LQ9H3M9 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC27.08■■□□□ 1.93
ATXN3LQ9H3M9 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC27.08■■□□□ 1.93
ATXN3LQ9H3M9 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC27.08■■□□□ 1.93
ATXN3LQ9H3M9 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC27.08■■□□□ 1.93
ATXN3LQ9H3M9 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
ATXN3LQ9H3M9 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
ATXN3LQ9H3M9 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
ATXN3LQ9H3M9 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
ATXN3LQ9H3M9 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
ATXN3LQ9H3M9 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC27.07■■□□□ 1.92
ATXN3LQ9H3M9 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC27.07■■□□□ 1.92
ATXN3LQ9H3M9 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC27.07■■□□□ 1.92
ATXN3LQ9H3M9 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC27.07■■□□□ 1.92
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms