Protein–RNA interactions for Protein: Q9BYE3

LCE3D, Late cornified envelope protein 3D, humanhuman

Predictions only

Length 92 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LCE3DQ9BYE3 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC6.98□□□□□ -1.29
LCE3DQ9BYE3 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC6.98□□□□□ -1.29
LCE3DQ9BYE3 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC6.98□□□□□ -1.29
LCE3DQ9BYE3 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC6.98□□□□□ -1.29
LCE3DQ9BYE3 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
LCE3DQ9BYE3 SHF-207ENST00000560540 2062 ntTSL 5 BASIC6.98□□□□□ -1.29
LCE3DQ9BYE3 MVK-208ENST00000539696 608 ntTSL 5 BASIC6.98□□□□□ -1.29
LCE3DQ9BYE3 HAGHL-204ENST00000549114 1820 ntTSL 5 BASIC6.98□□□□□ -1.29
LCE3DQ9BYE3 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC6.98□□□□□ -1.29
LCE3DQ9BYE3 AL135925.1-201ENST00000605920 1701 ntBASIC6.98□□□□□ -1.29
LCE3DQ9BYE3 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
LCE3DQ9BYE3 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC6.98□□□□□ -1.29
LCE3DQ9BYE3 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
LCE3DQ9BYE3 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC6.97□□□□□ -1.29
LCE3DQ9BYE3 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC6.97□□□□□ -1.29
LCE3DQ9BYE3 NEURL4-201ENST00000315614 5182 ntAPPRIS ALT2 TSL 1 (best) BASIC6.97□□□□□ -1.29
LCE3DQ9BYE3 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC6.97□□□□□ -1.29
LCE3DQ9BYE3 TCF24-201ENST00000563496 2450 ntAPPRIS P1 TSL 5 BASIC6.97□□□□□ -1.29
LCE3DQ9BYE3 GRM6-201ENST00000231188 6143 ntAPPRIS P1 TSL 2 BASIC6.97□□□□□ -1.29
LCE3DQ9BYE3 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
LCE3DQ9BYE3 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
LCE3DQ9BYE3 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC6.97□□□□□ -1.29
LCE3DQ9BYE3 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
LCE3DQ9BYE3 FAM102B-201ENST00000370035 5600 ntAPPRIS P2 TSL 1 (best) BASIC6.97□□□□□ -1.29
LCE3DQ9BYE3 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC6.97□□□□□ -1.29
LCE3DQ9BYE3 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
LCE3DQ9BYE3 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC6.96□□□□□ -1.29
LCE3DQ9BYE3 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC6.96□□□□□ -1.29
LCE3DQ9BYE3 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC6.96□□□□□ -1.29
LCE3DQ9BYE3 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC6.96□□□□□ -1.3
LCE3DQ9BYE3 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC6.96□□□□□ -1.3
LCE3DQ9BYE3 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
LCE3DQ9BYE3 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC6.96□□□□□ -1.3
LCE3DQ9BYE3 TGFBR1-202ENST00000374994 6516 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
LCE3DQ9BYE3 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC6.96□□□□□ -1.3
LCE3DQ9BYE3 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC6.96□□□□□ -1.3
LCE3DQ9BYE3 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC6.96□□□□□ -1.3
LCE3DQ9BYE3 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC6.95□□□□□ -1.3
LCE3DQ9BYE3 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
LCE3DQ9BYE3 HNRNPAB-207ENST00000514633 1571 ntAPPRIS ALT2 TSL 5 BASIC6.95□□□□□ -1.3
LCE3DQ9BYE3 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
LCE3DQ9BYE3 HNRNPUL2-201ENST00000301785 5106 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
LCE3DQ9BYE3 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
LCE3DQ9BYE3 PHF2-201ENST00000359246 5569 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
LCE3DQ9BYE3 TMEM268-202ENST00000374049 4578 ntAPPRIS ALT1 TSL 5 BASIC6.95□□□□□ -1.3
LCE3DQ9BYE3 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC6.95□□□□□ -1.3
LCE3DQ9BYE3 DRD5P2-201ENST00000421395 2012 ntBASIC6.94□□□□□ -1.3
LCE3DQ9BYE3 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
LCE3DQ9BYE3 PARD3-214ENST00000545693 5962 ntAPPRIS ALT2 TSL 1 (best) BASIC6.94□□□□□ -1.3
LCE3DQ9BYE3 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
LCE3DQ9BYE3 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC6.94□□□□□ -1.3
LCE3DQ9BYE3 OBSL1-214ENST00000603926 5520 ntTSL 5 BASIC6.94□□□□□ -1.3
LCE3DQ9BYE3 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
LCE3DQ9BYE3 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC6.94□□□□□ -1.3
LCE3DQ9BYE3 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC6.94□□□□□ -1.3
LCE3DQ9BYE3 AL139393.2-201ENST00000608721 2025 ntBASIC6.94□□□□□ -1.3
LCE3DQ9BYE3 MSANTD3-203ENST00000395067 1362 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
LCE3DQ9BYE3 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC6.94□□□□□ -1.3
LCE3DQ9BYE3 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
LCE3DQ9BYE3 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
LCE3DQ9BYE3 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC6.93□□□□□ -1.3
LCE3DQ9BYE3 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC6.93□□□□□ -1.3
LCE3DQ9BYE3 DGKQ-201ENST00000273814 4636 ntAPPRIS P2 TSL 1 (best) BASIC6.93□□□□□ -1.3
LCE3DQ9BYE3 AGTRAP-204ENST00000376637 1067 ntTSL 2 BASIC6.93□□□□□ -1.3
LCE3DQ9BYE3 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC6.93□□□□□ -1.3
LCE3DQ9BYE3 EML6-201ENST00000356458 8320 ntAPPRIS P1 TSL 5 BASIC6.93□□□□□ -1.3
LCE3DQ9BYE3 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
LCE3DQ9BYE3 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC6.93□□□□□ -1.3
LCE3DQ9BYE3 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
LCE3DQ9BYE3 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC6.92□□□□□ -1.3
LCE3DQ9BYE3 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC6.92□□□□□ -1.3
LCE3DQ9BYE3 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC6.92□□□□□ -1.3
LCE3DQ9BYE3 CHCHD4-201ENST00000295767 1603 ntTSL 2 BASIC6.92□□□□□ -1.3
LCE3DQ9BYE3 SH3RF3-201ENST00000309415 5803 ntAPPRIS P1 TSL 5 BASIC6.92□□□□□ -1.3
LCE3DQ9BYE3 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
LCE3DQ9BYE3 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
LCE3DQ9BYE3 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC6.92□□□□□ -1.3
LCE3DQ9BYE3 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
LCE3DQ9BYE3 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC6.92□□□□□ -1.3
LCE3DQ9BYE3 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC6.92□□□□□ -1.3
LCE3DQ9BYE3 GRK2-204ENST00000526285 1458 ntTSL 5 BASIC6.92□□□□□ -1.3
LCE3DQ9BYE3 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
LCE3DQ9BYE3 MTCL1-201ENST00000306329 5718 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
LCE3DQ9BYE3 CACNA1B-201ENST00000277549 7158 ntAPPRIS ALT2 TSL 1 (best) BASIC6.91□□□□□ -1.3
LCE3DQ9BYE3 CACNA1B-202ENST00000277551 7158 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
LCE3DQ9BYE3 ARPP19-201ENST00000249822 5301 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
LCE3DQ9BYE3 TMEM151B-202ENST00000451188 4895 ntAPPRIS P2 TSL 5 BASIC6.91□□□□□ -1.3
LCE3DQ9BYE3 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
LCE3DQ9BYE3 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC6.91□□□□□ -1.3
LCE3DQ9BYE3 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC6.91□□□□□ -1.3
LCE3DQ9BYE3 SATB1-AS1-216ENST00000598149 1119 ntTSL 2 BASIC6.91□□□□□ -1.3
LCE3DQ9BYE3 GRIK4-205ENST00000527524 5861 ntAPPRIS P1 TSL 2 BASIC6.91□□□□□ -1.3
LCE3DQ9BYE3 FAM89B-202ENST00000449319 1337 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
LCE3DQ9BYE3 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC6.91□□□□□ -1.3
LCE3DQ9BYE3 UPF1-207ENST00000599848 5311 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
LCE3DQ9BYE3 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
LCE3DQ9BYE3 DBP-205ENST00000601104 1489 ntTSL 1 (best) BASIC6.91□□□□□ -1.3
LCE3DQ9BYE3 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC6.91□□□□□ -1.3
LCE3DQ9BYE3 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
LCE3DQ9BYE3 ZDHHC14-203ENST00000359775 7380 ntAPPRIS P1 TSL 1 (best) BASIC6.9□□□□□ -1.3
Retrieved 100 of 98,524 protein–RNA pairs in 8.6 ms