Protein–RNA interactions for Protein: Q99878

HIST1H2AJ, Histone H2A type 1-J, humanhuman

Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H2AJQ99878 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC25.41■■□□□ 1.66
HIST1H2AJQ99878 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC25.41■■□□□ 1.66
HIST1H2AJQ99878 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC25.4■■□□□ 1.66
HIST1H2AJQ99878 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC25.39■■□□□ 1.66
HIST1H2AJQ99878 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC25.39■■□□□ 1.66
HIST1H2AJQ99878 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC25.39■■□□□ 1.65
HIST1H2AJQ99878 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC25.39■■□□□ 1.65
HIST1H2AJQ99878 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
HIST1H2AJQ99878 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC25.38■■□□□ 1.65
HIST1H2AJQ99878 AC108673.1-201ENST00000510422 1159 ntBASIC25.38■■□□□ 1.65
HIST1H2AJQ99878 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC25.38■■□□□ 1.65
HIST1H2AJQ99878 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC25.37■■□□□ 1.65
HIST1H2AJQ99878 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC25.37■■□□□ 1.65
HIST1H2AJQ99878 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC25.36■■□□□ 1.65
HIST1H2AJQ99878 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC25.35■■□□□ 1.65
HIST1H2AJQ99878 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC25.35■■□□□ 1.65
HIST1H2AJQ99878 AC127502.1-201ENST00000399971 1502 ntBASIC25.34■■□□□ 1.65
HIST1H2AJQ99878 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC25.34■■□□□ 1.65
HIST1H2AJQ99878 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC25.33■■□□□ 1.64
HIST1H2AJQ99878 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC25.32■■□□□ 1.64
HIST1H2AJQ99878 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC25.31■■□□□ 1.64
HIST1H2AJQ99878 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC25.31■■□□□ 1.64
HIST1H2AJQ99878 AL162393.1-201ENST00000437852 946 ntBASIC25.31■■□□□ 1.64
HIST1H2AJQ99878 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
HIST1H2AJQ99878 NRG1-221ENST00000614767 762 ntTSL 5 BASIC25.3■■□□□ 1.64
HIST1H2AJQ99878 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC25.3■■□□□ 1.64
HIST1H2AJQ99878 SHF-206ENST00000560471 2499 ntTSL 5 BASIC25.29■■□□□ 1.64
HIST1H2AJQ99878 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
HIST1H2AJQ99878 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC25.29■■□□□ 1.64
HIST1H2AJQ99878 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC25.29■■□□□ 1.64
HIST1H2AJQ99878 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC25.28■■□□□ 1.64
HIST1H2AJQ99878 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC25.28■■□□□ 1.64
HIST1H2AJQ99878 AC087741.3-201ENST00000624270 1347 ntBASIC25.28■■□□□ 1.64
HIST1H2AJQ99878 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC25.28■■□□□ 1.64
HIST1H2AJQ99878 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC25.27■■□□□ 1.64
HIST1H2AJQ99878 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC25.27■■□□□ 1.64
HIST1H2AJQ99878 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC25.27■■□□□ 1.64
HIST1H2AJQ99878 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC25.26■■□□□ 1.63
HIST1H2AJQ99878 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
HIST1H2AJQ99878 AP004833.2-201ENST00000532228 1454 ntBASIC25.26■■□□□ 1.63
HIST1H2AJQ99878 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC25.26■■□□□ 1.63
HIST1H2AJQ99878 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
HIST1H2AJQ99878 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC25.25■■□□□ 1.63
HIST1H2AJQ99878 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC25.25■■□□□ 1.63
HIST1H2AJQ99878 MIR6090-201ENST00000622481 60 ntBASIC25.25■■□□□ 1.63
HIST1H2AJQ99878 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC25.25■■□□□ 1.63
HIST1H2AJQ99878 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
HIST1H2AJQ99878 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC25.25■■□□□ 1.63
HIST1H2AJQ99878 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC25.25■■□□□ 1.63
HIST1H2AJQ99878 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC25.24■■□□□ 1.63
HIST1H2AJQ99878 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC25.24■■□□□ 1.63
HIST1H2AJQ99878 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC25.24■■□□□ 1.63
HIST1H2AJQ99878 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC25.23■■□□□ 1.63
HIST1H2AJQ99878 AC044849.2-201ENST00000606596 710 ntBASIC25.23■■□□□ 1.63
HIST1H2AJQ99878 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC25.22■■□□□ 1.63
HIST1H2AJQ99878 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC25.22■■□□□ 1.63
HIST1H2AJQ99878 EI24-212ENST00000615917 1407 ntTSL 2 BASIC25.21■■□□□ 1.63
HIST1H2AJQ99878 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC25.21■■□□□ 1.63
HIST1H2AJQ99878 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC25.2■■□□□ 1.62
HIST1H2AJQ99878 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC25.2■■□□□ 1.62
HIST1H2AJQ99878 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC25.19■■□□□ 1.62
HIST1H2AJQ99878 CIB2-204ENST00000557846 934 ntTSL 3 BASIC25.19■■□□□ 1.62
HIST1H2AJQ99878 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC25.18■■□□□ 1.62
HIST1H2AJQ99878 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC25.18■■□□□ 1.62
HIST1H2AJQ99878 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC25.18■■□□□ 1.62
HIST1H2AJQ99878 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC25.18■■□□□ 1.62
HIST1H2AJQ99878 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC25.18■■□□□ 1.62
HIST1H2AJQ99878 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC25.18■■□□□ 1.62
HIST1H2AJQ99878 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC25.17■■□□□ 1.62
HIST1H2AJQ99878 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC25.17■■□□□ 1.62
HIST1H2AJQ99878 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC25.16■■□□□ 1.62
HIST1H2AJQ99878 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC25.16■■□□□ 1.62
HIST1H2AJQ99878 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC25.16■■□□□ 1.62
HIST1H2AJQ99878 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC25.16■■□□□ 1.62
HIST1H2AJQ99878 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC25.16■■□□□ 1.62
HIST1H2AJQ99878 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC25.15■■□□□ 1.62
HIST1H2AJQ99878 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC25.15■■□□□ 1.62
HIST1H2AJQ99878 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC25.14■■□□□ 1.62
HIST1H2AJQ99878 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC25.14■■□□□ 1.62
HIST1H2AJQ99878 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC25.14■■□□□ 1.61
HIST1H2AJQ99878 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC25.13■■□□□ 1.61
HIST1H2AJQ99878 BOD1-206ENST00000480951 814 ntTSL 2 BASIC25.13■■□□□ 1.61
HIST1H2AJQ99878 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC25.13■■□□□ 1.61
HIST1H2AJQ99878 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC25.13■■□□□ 1.61
HIST1H2AJQ99878 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC25.12■■□□□ 1.61
HIST1H2AJQ99878 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC25.12■■□□□ 1.61
HIST1H2AJQ99878 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC25.12■■□□□ 1.61
HIST1H2AJQ99878 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC25.11■■□□□ 1.61
HIST1H2AJQ99878 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC25.1■■□□□ 1.61
HIST1H2AJQ99878 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC25.1■■□□□ 1.61
HIST1H2AJQ99878 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC25.09■■□□□ 1.61
HIST1H2AJQ99878 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC25.09■■□□□ 1.61
HIST1H2AJQ99878 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC25.09■■□□□ 1.61
HIST1H2AJQ99878 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC25.08■■□□□ 1.61
HIST1H2AJQ99878 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC25.08■■□□□ 1.61
HIST1H2AJQ99878 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
HIST1H2AJQ99878 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.61
HIST1H2AJQ99878 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC25.08■■□□□ 1.61
HIST1H2AJQ99878 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC25.08■■□□□ 1.6
HIST1H2AJQ99878 RPS2P35-201ENST00000443417 897 ntBASIC25.07■■□□□ 1.6
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms