Protein–RNA interactions for Protein: Q96M91

CFAP53, Cilia- and flagella-associated protein 53, humanhuman

Predictions only

Length 514 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CFAP53Q96M91 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC34.92■■■■□ 3.18
CFAP53Q96M91 MIR7108-201ENST00000614319 87 ntBASIC34.91■■■■□ 3.18
CFAP53Q96M91 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC34.9■■■■□ 3.18
CFAP53Q96M91 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC34.9■■■■□ 3.18
CFAP53Q96M91 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC34.9■■■■□ 3.18
CFAP53Q96M91 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC34.89■■■■□ 3.18
CFAP53Q96M91 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC34.89■■■■□ 3.18
CFAP53Q96M91 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC34.89■■■■□ 3.18
CFAP53Q96M91 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC34.89■■■■□ 3.18
CFAP53Q96M91 CALM3-209ENST00000597743 577 ntTSL 4 BASIC34.89■■■■□ 3.18
CFAP53Q96M91 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC34.87■■■■□ 3.17
CFAP53Q96M91 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC34.87■■■■□ 3.17
CFAP53Q96M91 LINC00273-201ENST00000539813 1452 ntBASIC34.86■■■■□ 3.17
CFAP53Q96M91 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC34.86■■■■□ 3.17
CFAP53Q96M91 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC34.86■■■■□ 3.17
CFAP53Q96M91 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC34.85■■■■□ 3.17
CFAP53Q96M91 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC34.84■■■■□ 3.17
CFAP53Q96M91 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC34.84■■■■□ 3.17
CFAP53Q96M91 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC34.84■■■■□ 3.17
CFAP53Q96M91 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC34.84■■■■□ 3.17
CFAP53Q96M91 ABCB10P1-201ENST00000614297 2181 ntBASIC34.83■■■■□ 3.17
CFAP53Q96M91 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC34.82■■■■□ 3.16
CFAP53Q96M91 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC34.81■■■■□ 3.16
CFAP53Q96M91 LINC01971-201ENST00000617888 1048 ntBASIC34.81■■■■□ 3.16
CFAP53Q96M91 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC34.8■■■■□ 3.16
CFAP53Q96M91 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC34.8■■■■□ 3.16
CFAP53Q96M91 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC34.79■■■■□ 3.16
CFAP53Q96M91 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC34.78■■■■□ 3.16
CFAP53Q96M91 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC34.78■■■■□ 3.16
CFAP53Q96M91 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC34.78■■■■□ 3.16
CFAP53Q96M91 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC34.77■■■■□ 3.16
CFAP53Q96M91 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC34.77■■■■□ 3.16
CFAP53Q96M91 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC34.76■■■■□ 3.15
CFAP53Q96M91 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC34.76■■■■□ 3.15
CFAP53Q96M91 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC34.75■■■■□ 3.15
CFAP53Q96M91 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC34.75■■■■□ 3.15
CFAP53Q96M91 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC34.75■■■■□ 3.15
CFAP53Q96M91 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC34.75■■■■□ 3.15
CFAP53Q96M91 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC34.74■■■■□ 3.15
CFAP53Q96M91 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC34.73■■■■□ 3.15
CFAP53Q96M91 PVT1-219ENST00000523427 938 ntTSL 3 BASIC34.73■■■■□ 3.15
CFAP53Q96M91 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC34.72■■■■□ 3.15
CFAP53Q96M91 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC34.72■■■■□ 3.15
CFAP53Q96M91 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC34.71■■■■□ 3.15
CFAP53Q96M91 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC34.7■■■■□ 3.15
CFAP53Q96M91 DUX4L11-201ENST00000611504 1267 ntBASIC34.7■■■■□ 3.15
CFAP53Q96M91 DUX4L12-201ENST00000614593 1267 ntBASIC34.7■■■■□ 3.15
CFAP53Q96M91 DUX4L14-201ENST00000621227 1267 ntBASIC34.7■■■■□ 3.15
CFAP53Q96M91 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC34.7■■■■□ 3.15
CFAP53Q96M91 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC34.69■■■■□ 3.14
CFAP53Q96M91 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC34.69■■■■□ 3.14
CFAP53Q96M91 AC135983.2-203ENST00000454486 1613 ntBASIC34.69■■■■□ 3.14
CFAP53Q96M91 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC34.69■■■■□ 3.14
CFAP53Q96M91 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC34.68■■■■□ 3.14
CFAP53Q96M91 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC34.68■■■■□ 3.14
CFAP53Q96M91 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC34.67■■■■□ 3.14
CFAP53Q96M91 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC34.67■■■■□ 3.14
CFAP53Q96M91 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC34.67■■■■□ 3.14
CFAP53Q96M91 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC34.66■■■■□ 3.14
CFAP53Q96M91 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC34.66■■■■□ 3.14
CFAP53Q96M91 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC34.66■■■■□ 3.14
CFAP53Q96M91 RNF166-209ENST00000567844 633 ntTSL 5 BASIC34.65■■■■□ 3.14
CFAP53Q96M91 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC34.65■■■■□ 3.14
CFAP53Q96M91 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC34.64■■■■□ 3.14
CFAP53Q96M91 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC34.64■■■■□ 3.14
CFAP53Q96M91 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC34.64■■■■□ 3.14
CFAP53Q96M91 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC34.64■■■■□ 3.14
CFAP53Q96M91 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC34.63■■■■□ 3.13
CFAP53Q96M91 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC34.63■■■■□ 3.13
CFAP53Q96M91 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC34.63■■■■□ 3.13
CFAP53Q96M91 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC34.63■■■■□ 3.13
CFAP53Q96M91 WHAMMP2-203ENST00000563942 1603 ntBASIC34.63■■■■□ 3.13
CFAP53Q96M91 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC34.62■■■■□ 3.13
CFAP53Q96M91 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC34.62■■■■□ 3.13
CFAP53Q96M91 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC34.61■■■■□ 3.13
CFAP53Q96M91 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC34.6■■■■□ 3.13
CFAP53Q96M91 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC34.6■■■■□ 3.13
CFAP53Q96M91 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC34.6■■■■□ 3.13
CFAP53Q96M91 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC34.59■■■■□ 3.13
CFAP53Q96M91 MACF1-219ENST00000484793 834 ntTSL 2 BASIC34.59■■■■□ 3.13
CFAP53Q96M91 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC34.59■■■■□ 3.13
CFAP53Q96M91 AP004833.2-201ENST00000532228 1454 ntBASIC34.58■■■■□ 3.13
CFAP53Q96M91 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC34.58■■■■□ 3.13
CFAP53Q96M91 AGPS-202ENST00000409888 815 ntTSL 4 BASIC34.58■■■■□ 3.13
CFAP53Q96M91 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC34.57■■■■□ 3.12
CFAP53Q96M91 DUX4L13-201ENST00000554103 1267 ntBASIC34.57■■■■□ 3.12
CFAP53Q96M91 DUX4L15-201ENST00000611059 1267 ntBASIC34.57■■■■□ 3.12
CFAP53Q96M91 DUX4L23-201ENST00000615195 1269 ntBASIC34.57■■■■□ 3.12
CFAP53Q96M91 DUX4L24-201ENST00000617576 1269 ntBASIC34.57■■■■□ 3.12
CFAP53Q96M91 DUX4L22-201ENST00000618238 1269 ntBASIC34.57■■■■□ 3.12
CFAP53Q96M91 DUX4L20-201ENST00000619712 1269 ntBASIC34.57■■■■□ 3.12
CFAP53Q96M91 DUX4L21-201ENST00000622058 1269 ntBASIC34.57■■■■□ 3.12
CFAP53Q96M91 DUX4L10-201ENST00000622460 1267 ntBASIC34.57■■■■□ 3.12
CFAP53Q96M91 DUX4L25-201ENST00000624915 1269 ntBASIC34.57■■■■□ 3.12
CFAP53Q96M91 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC34.56■■■■□ 3.12
CFAP53Q96M91 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC34.56■■■■□ 3.12
CFAP53Q96M91 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC34.56■■■■□ 3.12
CFAP53Q96M91 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC34.56■■■■□ 3.12
CFAP53Q96M91 CHML-204ENST00000638121 920 ntTSL 2 BASIC34.56■■■■□ 3.12
CFAP53Q96M91 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC34.55■■■■□ 3.12
Retrieved 100 of 98,524 protein–RNA pairs in 62 ms