Protein–RNA interactions for Protein: Q96FF9

CDCA5, Sororin, humanhuman

Predictions only

Length 252 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA5Q96FF9 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC31.22■■■□□ 2.59
CDCA5Q96FF9 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC31.21■■■□□ 2.59
CDCA5Q96FF9 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC31.21■■■□□ 2.59
CDCA5Q96FF9 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC31.21■■■□□ 2.59
CDCA5Q96FF9 AC012354.3-201ENST00000623734 483 ntBASIC31.21■■■□□ 2.59
CDCA5Q96FF9 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC31.2■■■□□ 2.58
CDCA5Q96FF9 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC31.19■■■□□ 2.58
CDCA5Q96FF9 LINC00273-201ENST00000539813 1452 ntBASIC31.19■■■□□ 2.58
CDCA5Q96FF9 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC31.18■■■□□ 2.58
CDCA5Q96FF9 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC31.18■■■□□ 2.58
CDCA5Q96FF9 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
CDCA5Q96FF9 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC31.18■■■□□ 2.58
CDCA5Q96FF9 HNRNPUL1-221ENST00000617305 1018 ntTSL 1 (best) BASIC31.18■■■□□ 2.58
CDCA5Q96FF9 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
CDCA5Q96FF9 AC022413.1-201ENST00000624602 984 ntBASIC31.17■■■□□ 2.58
CDCA5Q96FF9 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC31.17■■■□□ 2.58
CDCA5Q96FF9 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC31.16■■■□□ 2.58
CDCA5Q96FF9 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC31.16■■■□□ 2.58
CDCA5Q96FF9 TRNP1-201ENST00000522111 1958 ntAPPRIS P2 TSL 1 (best) BASIC31.15■■■□□ 2.58
CDCA5Q96FF9 AC120057.4-201ENST00000624722 1615 ntBASIC31.14■■■□□ 2.58
CDCA5Q96FF9 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC31.14■■■□□ 2.58
CDCA5Q96FF9 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC31.14■■■□□ 2.58
CDCA5Q96FF9 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
CDCA5Q96FF9 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
CDCA5Q96FF9 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC31.12■■■□□ 2.57
CDCA5Q96FF9 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC31.12■■■□□ 2.57
CDCA5Q96FF9 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
CDCA5Q96FF9 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
CDCA5Q96FF9 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC31.11■■■□□ 2.57
CDCA5Q96FF9 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC31.1■■■□□ 2.57
CDCA5Q96FF9 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
CDCA5Q96FF9 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC31.08■■■□□ 2.57
CDCA5Q96FF9 ABHD12-201ENST00000339157 2117 ntAPPRIS P1 TSL 2 BASIC31.07■■■□□ 2.56
CDCA5Q96FF9 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
CDCA5Q96FF9 TUBB6-201ENST00000317702 2064 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
CDCA5Q96FF9 STK25-202ENST00000401869 2251 ntAPPRIS P1 TSL 1 (best) BASIC31.05■■■□□ 2.56
CDCA5Q96FF9 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC31.05■■■□□ 2.56
CDCA5Q96FF9 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC31.04■■■□□ 2.56
CDCA5Q96FF9 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
CDCA5Q96FF9 HES4-202ENST00000428771 1040 ntTSL 2 BASIC31.04■■■□□ 2.56
CDCA5Q96FF9 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
CDCA5Q96FF9 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC31.04■■■□□ 2.56
CDCA5Q96FF9 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC31.04■■■□□ 2.56
CDCA5Q96FF9 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC31.03■■■□□ 2.56
CDCA5Q96FF9 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC31.03■■■□□ 2.56
CDCA5Q96FF9 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC31.03■■■□□ 2.56
CDCA5Q96FF9 METTL24-201ENST00000338882 1119 ntAPPRIS P1 TSL 5 BASIC31.02■■■□□ 2.56
CDCA5Q96FF9 FTCD-202ENST00000397743 1834 ntTSL 1 (best) BASIC31.02■■■□□ 2.56
CDCA5Q96FF9 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC31.02■■■□□ 2.56
CDCA5Q96FF9 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC31.02■■■□□ 2.56
CDCA5Q96FF9 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
CDCA5Q96FF9 AL033527.3-201ENST00000566366 1196 ntBASIC31.01■■■□□ 2.55
CDCA5Q96FF9 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.55
CDCA5Q96FF9 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC31.01■■■□□ 2.55
CDCA5Q96FF9 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC31■■■□□ 2.55
CDCA5Q96FF9 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC31■■■□□ 2.55
CDCA5Q96FF9 AC008813.1-201ENST00000536597 885 ntBASIC31■■■□□ 2.55
CDCA5Q96FF9 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC31■■■□□ 2.55
CDCA5Q96FF9 SAMD1-202ENST00000533683 2164 ntAPPRIS P5 TSL 1 (best) BASIC30.99■■■□□ 2.55
CDCA5Q96FF9 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC30.99■■■□□ 2.55
CDCA5Q96FF9 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC30.98■■■□□ 2.55
CDCA5Q96FF9 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC30.98■■■□□ 2.55
CDCA5Q96FF9 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC30.98■■■□□ 2.55
CDCA5Q96FF9 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
CDCA5Q96FF9 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC30.96■■■□□ 2.55
CDCA5Q96FF9 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC30.96■■■□□ 2.55
CDCA5Q96FF9 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC30.96■■■□□ 2.55
CDCA5Q96FF9 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
CDCA5Q96FF9 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC30.96■■■□□ 2.55
CDCA5Q96FF9 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
CDCA5Q96FF9 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC30.96■■■□□ 2.55
CDCA5Q96FF9 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC30.95■■■□□ 2.55
CDCA5Q96FF9 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC30.95■■■□□ 2.55
CDCA5Q96FF9 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC30.95■■■□□ 2.55
CDCA5Q96FF9 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC30.94■■■□□ 2.54
CDCA5Q96FF9 AC018358.1-201ENST00000631079 1402 ntBASIC30.93■■■□□ 2.54
CDCA5Q96FF9 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC30.93■■■□□ 2.54
CDCA5Q96FF9 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC30.92■■■□□ 2.54
CDCA5Q96FF9 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC30.92■■■□□ 2.54
CDCA5Q96FF9 CHST12-204ENST00000618655 2131 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
CDCA5Q96FF9 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
CDCA5Q96FF9 U85056.1-201ENST00000616429 682 ntBASIC30.91■■■□□ 2.54
CDCA5Q96FF9 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC30.91■■■□□ 2.54
CDCA5Q96FF9 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC30.9■■■□□ 2.54
CDCA5Q96FF9 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC30.9■■■□□ 2.54
CDCA5Q96FF9 SH3GLB2-201ENST00000372554 1985 ntTSL 1 (best) BASIC30.89■■■□□ 2.54
CDCA5Q96FF9 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC30.89■■■□□ 2.54
CDCA5Q96FF9 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC30.89■■■□□ 2.54
CDCA5Q96FF9 AL161658.1-201ENST00000623641 1967 ntBASIC30.88■■■□□ 2.53
CDCA5Q96FF9 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC30.88■■■□□ 2.53
CDCA5Q96FF9 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC30.87■■■□□ 2.53
CDCA5Q96FF9 AC010864.1-201ENST00000609407 1511 ntBASIC30.87■■■□□ 2.53
CDCA5Q96FF9 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC30.87■■■□□ 2.53
CDCA5Q96FF9 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
CDCA5Q96FF9 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC30.86■■■□□ 2.53
CDCA5Q96FF9 HYI-213ENST00000583037 1322 ntTSL 5 BASIC30.86■■■□□ 2.53
CDCA5Q96FF9 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC30.85■■■□□ 2.53
CDCA5Q96FF9 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
CDCA5Q96FF9 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC30.84■■■□□ 2.53
CDCA5Q96FF9 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC30.84■■■□□ 2.53
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms