Protein–RNA interactions for Protein: Q92617

NPIPB3, Nuclear pore complex-interacting protein family member B3, humanhuman

Predictions only

Length 1,050 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPB3Q92617 ATRAID-201ENST00000380171 1240 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
NPIPB3Q92617 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
NPIPB3Q92617 DUSP14-206ENST00000617516 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
NPIPB3Q92617 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC20.35■□□□□ 0.85
NPIPB3Q92617 GSTP1-202ENST00000398606 965 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
NPIPB3Q92617 SERPING1-205ENST00000403558 2231 ntTSL 5 BASIC20.34■□□□□ 0.85
NPIPB3Q92617 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC20.33■□□□□ 0.84
NPIPB3Q92617 CHSY1-201ENST00000254190 4550 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
NPIPB3Q92617 AC068152.1-210ENST00000574741 836 ntTSL 3 BASIC20.32■□□□□ 0.84
NPIPB3Q92617 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC20.32■□□□□ 0.84
NPIPB3Q92617 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC20.31■□□□□ 0.84
NPIPB3Q92617 HSD11B1L-209ENST00000577917 1553 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
NPIPB3Q92617 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC20.31■□□□□ 0.84
NPIPB3Q92617 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
NPIPB3Q92617 PLEKHF1-201ENST00000436066 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NPIPB3Q92617 HECA-201ENST00000367658 5614 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NPIPB3Q92617 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC20.3■□□□□ 0.84
NPIPB3Q92617 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC20.3■□□□□ 0.84
NPIPB3Q92617 HYAL2-202ENST00000395139 2136 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
NPIPB3Q92617 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
NPIPB3Q92617 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NPIPB3Q92617 EBPL-202ENST00000378268 680 ntTSL 3 BASIC20.29■□□□□ 0.84
NPIPB3Q92617 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
NPIPB3Q92617 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC20.29■□□□□ 0.84
NPIPB3Q92617 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC20.29■□□□□ 0.84
NPIPB3Q92617 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC20.29■□□□□ 0.84
NPIPB3Q92617 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
NPIPB3Q92617 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
NPIPB3Q92617 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC20.28■□□□□ 0.84
NPIPB3Q92617 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NPIPB3Q92617 DENR-202ENST00000455982 1052 ntTSL 5 BASIC20.28■□□□□ 0.84
NPIPB3Q92617 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
NPIPB3Q92617 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
NPIPB3Q92617 AL391121.1-201ENST00000607967 1349 ntBASIC20.27■□□□□ 0.84
NPIPB3Q92617 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
NPIPB3Q92617 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC20.27■□□□□ 0.84
NPIPB3Q92617 SLC16A3-214ENST00000582743 2002 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
NPIPB3Q92617 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC20.26■□□□□ 0.83
NPIPB3Q92617 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
NPIPB3Q92617 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NPIPB3Q92617 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC20.25■□□□□ 0.83
NPIPB3Q92617 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC20.25■□□□□ 0.83
NPIPB3Q92617 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
NPIPB3Q92617 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC20.25■□□□□ 0.83
NPIPB3Q92617 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
NPIPB3Q92617 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC20.24■□□□□ 0.83
NPIPB3Q92617 AP004833.2-201ENST00000532228 1454 ntBASIC20.24■□□□□ 0.83
NPIPB3Q92617 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC20.23■□□□□ 0.83
NPIPB3Q92617 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
NPIPB3Q92617 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC20.22■□□□□ 0.83
NPIPB3Q92617 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC20.22■□□□□ 0.83
NPIPB3Q92617 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
NPIPB3Q92617 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
NPIPB3Q92617 CAHM-201ENST00000604200 896 ntBASIC20.22■□□□□ 0.83
NPIPB3Q92617 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC20.21■□□□□ 0.83
NPIPB3Q92617 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
NPIPB3Q92617 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
NPIPB3Q92617 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC20.21■□□□□ 0.83
NPIPB3Q92617 AC127502.1-201ENST00000399971 1502 ntBASIC20.21■□□□□ 0.83
NPIPB3Q92617 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
NPIPB3Q92617 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC20.21■□□□□ 0.83
NPIPB3Q92617 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC20.21■□□□□ 0.83
NPIPB3Q92617 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
NPIPB3Q92617 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC20.2■□□□□ 0.82
NPIPB3Q92617 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC20.2■□□□□ 0.82
NPIPB3Q92617 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
NPIPB3Q92617 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
NPIPB3Q92617 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
NPIPB3Q92617 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
NPIPB3Q92617 AC097358.2-201ENST00000607541 1159 ntBASIC20.19■□□□□ 0.82
NPIPB3Q92617 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
NPIPB3Q92617 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
NPIPB3Q92617 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC20.19■□□□□ 0.82
NPIPB3Q92617 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NPIPB3Q92617 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
NPIPB3Q92617 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NPIPB3Q92617 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
NPIPB3Q92617 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NPIPB3Q92617 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NPIPB3Q92617 AL121749.1-202ENST00000609313 2153 ntBASIC20.18■□□□□ 0.82
NPIPB3Q92617 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
NPIPB3Q92617 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
NPIPB3Q92617 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NPIPB3Q92617 AC136428.2-201ENST00000563187 214 ntBASIC20.17■□□□□ 0.82
NPIPB3Q92617 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
NPIPB3Q92617 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NPIPB3Q92617 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
NPIPB3Q92617 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
NPIPB3Q92617 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
NPIPB3Q92617 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
NPIPB3Q92617 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC20.16■□□□□ 0.82
NPIPB3Q92617 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
NPIPB3Q92617 PROC-203ENST00000409048 1586 ntTSL 5 BASIC20.15■□□□□ 0.82
NPIPB3Q92617 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
NPIPB3Q92617 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC20.14■□□□□ 0.81
NPIPB3Q92617 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC20.14■□□□□ 0.81
NPIPB3Q92617 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
NPIPB3Q92617 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
NPIPB3Q92617 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
NPIPB3Q92617 BX255925.1-201ENST00000566954 1854 ntBASIC20.13■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 32.7 ms