Protein–RNA interactions for Protein: Q8TAD8

SNIP1, Smad nuclear-interacting protein 1, humanhuman

Known RBP Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1Q8TAD8 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC24.75■■□□□ 1.55
SNIP1Q8TAD8 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC24.75■■□□□ 1.55
SNIP1Q8TAD8 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC24.74■■□□□ 1.55
SNIP1Q8TAD8 SLC25A10-203ENST00000545862 1911 ntTSL 1 (best) BASIC24.74■■□□□ 1.55
SNIP1Q8TAD8 MRPL23-202ENST00000381519 643 ntAPPRIS P1 TSL 3 BASIC24.73■■□□□ 1.55
SNIP1Q8TAD8 MRPL23-205ENST00000397298 736 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
SNIP1Q8TAD8 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC24.73■■□□□ 1.55
SNIP1Q8TAD8 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC24.72■■□□□ 1.55
SNIP1Q8TAD8 MXD3-208ENST00000513063 861 ntAPPRIS P1 TSL 5 BASIC24.72■■□□□ 1.55
SNIP1Q8TAD8 SNX5-219ENST00000606602 885 ntTSL 1 (best) BASIC24.72■■□□□ 1.55
SNIP1Q8TAD8 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC24.72■■□□□ 1.55
SNIP1Q8TAD8 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
SNIP1Q8TAD8 ZSCAN1-202ENST00000391700 952 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
SNIP1Q8TAD8 TSPAN11-203ENST00000545802 1649 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
SNIP1Q8TAD8 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC24.71■■□□□ 1.55
SNIP1Q8TAD8 RNF215-203ENST00000382363 1992 ntAPPRIS P2 TSL 1 (best) BASIC24.71■■□□□ 1.55
SNIP1Q8TAD8 HOXB3-207ENST00000472863 1909 ntTSL 2 BASIC24.71■■□□□ 1.55
SNIP1Q8TAD8 LINC00273-201ENST00000539813 1452 ntBASIC24.7■■□□□ 1.55
SNIP1Q8TAD8 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
SNIP1Q8TAD8 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC24.7■■□□□ 1.54
SNIP1Q8TAD8 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC24.7■■□□□ 1.54
SNIP1Q8TAD8 DPP6-204ENST00000406326 2012 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
SNIP1Q8TAD8 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC24.68■■□□□ 1.54
SNIP1Q8TAD8 HNRNPAB-206ENST00000506339 1747 ntAPPRIS ALT2 TSL 5 BASIC24.68■■□□□ 1.54
SNIP1Q8TAD8 AC018358.1-201ENST00000631079 1402 ntBASIC24.68■■□□□ 1.54
SNIP1Q8TAD8 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC24.67■■□□□ 1.54
SNIP1Q8TAD8 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
SNIP1Q8TAD8 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC24.67■■□□□ 1.54
SNIP1Q8TAD8 ADRA2C-202ENST00000509482 1600 ntTSL 3 BASIC24.67■■□□□ 1.54
SNIP1Q8TAD8 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC24.66■■□□□ 1.54
SNIP1Q8TAD8 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC24.66■■□□□ 1.54
SNIP1Q8TAD8 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC24.65■■□□□ 1.54
SNIP1Q8TAD8 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC24.65■■□□□ 1.54
SNIP1Q8TAD8 AL033527.3-201ENST00000566366 1196 ntBASIC24.65■■□□□ 1.54
SNIP1Q8TAD8 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC24.65■■□□□ 1.54
SNIP1Q8TAD8 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC24.65■■□□□ 1.54
SNIP1Q8TAD8 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC24.65■■□□□ 1.54
SNIP1Q8TAD8 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC24.65■■□□□ 1.54
SNIP1Q8TAD8 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC24.64■■□□□ 1.54
SNIP1Q8TAD8 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC24.64■■□□□ 1.54
SNIP1Q8TAD8 AC008813.1-201ENST00000536597 885 ntBASIC24.64■■□□□ 1.54
SNIP1Q8TAD8 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC24.62■■□□□ 1.53
SNIP1Q8TAD8 KMT2E-AS1-201ENST00000453677 736 ntTSL 3 BASIC24.62■■□□□ 1.53
SNIP1Q8TAD8 PXMP2-205ENST00000543589 632 ntTSL 3 BASIC24.62■■□□□ 1.53
SNIP1Q8TAD8 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC24.62■■□□□ 1.53
SNIP1Q8TAD8 SDCCAG3-204ENST00000371725 2129 ntAPPRIS ALT2 TSL 5 BASIC24.61■■□□□ 1.53
SNIP1Q8TAD8 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC24.61■■□□□ 1.53
SNIP1Q8TAD8 CAPNS1-216ENST00000628306 1389 ntTSL 5 BASIC24.61■■□□□ 1.53
SNIP1Q8TAD8 TNFRSF4-201ENST00000379236 1068 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
SNIP1Q8TAD8 AL590677.1-201ENST00000438431 380 ntTSL 5 BASIC24.59■■□□□ 1.53
SNIP1Q8TAD8 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC24.59■■□□□ 1.53
SNIP1Q8TAD8 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC24.58■■□□□ 1.53
SNIP1Q8TAD8 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC24.58■■□□□ 1.53
SNIP1Q8TAD8 TRIM52-AS1-202ENST00000507434 672 ntTSL 1 (best) BASIC24.58■■□□□ 1.53
SNIP1Q8TAD8 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC24.57■■□□□ 1.52
SNIP1Q8TAD8 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
SNIP1Q8TAD8 QDPR-208ENST00000513615 1188 ntTSL 2 BASIC24.55■■□□□ 1.52
SNIP1Q8TAD8 U85056.1-201ENST00000616429 682 ntBASIC24.55■■□□□ 1.52
SNIP1Q8TAD8 CCZ1-201ENST00000325974 1802 ntAPPRIS P1 TSL 1 (best) BASIC24.55■■□□□ 1.52
SNIP1Q8TAD8 RASGEF1C-207ENST00000615330 2268 ntTSL 5 BASIC24.55■■□□□ 1.52
SNIP1Q8TAD8 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC24.53■■□□□ 1.52
SNIP1Q8TAD8 HYI-213ENST00000583037 1322 ntTSL 5 BASIC24.53■■□□□ 1.52
SNIP1Q8TAD8 PRKAR1B-201ENST00000360274 2007 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
SNIP1Q8TAD8 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC24.52■■□□□ 1.52
SNIP1Q8TAD8 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC24.52■■□□□ 1.52
SNIP1Q8TAD8 LINC01770-201ENST00000417917 634 ntTSL 2 BASIC24.51■■□□□ 1.51
SNIP1Q8TAD8 C20orf24-203ENST00000373852 1059 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
SNIP1Q8TAD8 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
SNIP1Q8TAD8 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC24.5■■□□□ 1.51
SNIP1Q8TAD8 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC24.5■■□□□ 1.51
SNIP1Q8TAD8 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC24.5■■□□□ 1.51
SNIP1Q8TAD8 TSPY13P-201ENST00000338964 914 ntBASIC24.49■■□□□ 1.51
SNIP1Q8TAD8 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC24.49■■□□□ 1.51
SNIP1Q8TAD8 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC24.49■■□□□ 1.51
SNIP1Q8TAD8 ZBTB12-201ENST00000375527 1875 ntAPPRIS P1 TSL 1 (best) BASIC24.48■■□□□ 1.51
SNIP1Q8TAD8 GFER-205ENST00000569451 517 ntTSL 5 BASIC24.48■■□□□ 1.51
SNIP1Q8TAD8 SNTG2-201ENST00000308624 1888 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
SNIP1Q8TAD8 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC24.47■■□□□ 1.51
SNIP1Q8TAD8 HOMER3-207ENST00000594794 903 ntTSL 5 BASIC24.47■■□□□ 1.51
SNIP1Q8TAD8 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC24.47■■□□□ 1.51
SNIP1Q8TAD8 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
SNIP1Q8TAD8 PMS1-220ENST00000618056 1468 ntTSL 5 BASIC24.46■■□□□ 1.51
SNIP1Q8TAD8 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC24.46■■□□□ 1.51
SNIP1Q8TAD8 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC24.46■■□□□ 1.51
SNIP1Q8TAD8 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC24.46■■□□□ 1.51
SNIP1Q8TAD8 C1orf232-201ENST00000634842 643 ntAPPRIS P5 TSL 5 BASIC24.45■■□□□ 1.5
SNIP1Q8TAD8 AC105285.1-201ENST00000500914 2036 ntTSL 1 (best) BASIC24.45■■□□□ 1.5
SNIP1Q8TAD8 MZT2B-201ENST00000281871 933 ntAPPRIS P3 TSL 1 (best) BASIC24.44■■□□□ 1.5
SNIP1Q8TAD8 MZT2A-201ENST00000309451 624 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
SNIP1Q8TAD8 BTBD19-201ENST00000409335 1214 ntTSL 5 BASIC24.44■■□□□ 1.5
SNIP1Q8TAD8 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
SNIP1Q8TAD8 AC060814.1-201ENST00000554326 538 ntBASIC24.44■■□□□ 1.5
SNIP1Q8TAD8 RDX-206ENST00000528900 1814 ntTSL 1 (best) BASIC24.44■■□□□ 1.5
SNIP1Q8TAD8 ANGPTL6-204ENST00000592641 1781 ntAPPRIS P1 TSL 1 (best) BASIC24.44■■□□□ 1.5
SNIP1Q8TAD8 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC24.43■■□□□ 1.5
SNIP1Q8TAD8 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
SNIP1Q8TAD8 FGF13-AS1-202ENST00000446383 584 ntTSL 3 BASIC24.43■■□□□ 1.5
SNIP1Q8TAD8 CCDC37-AS1-202ENST00000506660 986 ntTSL 1 (best) BASIC24.43■■□□□ 1.5
SNIP1Q8TAD8 CHST11-203ENST00000547956 936 ntTSL 2 BASIC24.43■■□□□ 1.5
SNIP1Q8TAD8 CTSZ-201ENST00000217131 1495 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms