Protein–RNA interactions for Protein: Q8NDV7

TNRC6A, Trinucleotide repeat-containing gene 6A protein, humanhuman

Known RBP Predictions only

Length 1,962 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNRC6AQ8NDV7 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
TNRC6AQ8NDV7 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
TNRC6AQ8NDV7 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
TNRC6AQ8NDV7 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
TNRC6AQ8NDV7 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
TNRC6AQ8NDV7 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
TNRC6AQ8NDV7 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC24.05■■□□□ 1.44
TNRC6AQ8NDV7 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC24.05■■□□□ 1.44
TNRC6AQ8NDV7 ABHD17AP5-201ENST00000580133 923 ntBASIC24.05■■□□□ 1.44
TNRC6AQ8NDV7 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC24.05■■□□□ 1.44
TNRC6AQ8NDV7 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC24.05■■□□□ 1.44
TNRC6AQ8NDV7 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC24.05■■□□□ 1.44
TNRC6AQ8NDV7 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC24.04■■□□□ 1.44
TNRC6AQ8NDV7 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC24.04■■□□□ 1.44
TNRC6AQ8NDV7 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC24.03■■□□□ 1.44
TNRC6AQ8NDV7 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC24.03■■□□□ 1.44
TNRC6AQ8NDV7 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC24.03■■□□□ 1.44
TNRC6AQ8NDV7 IFNGR2-201ENST00000290219 2221 ntAPPRIS P3 TSL 1 (best) BASIC24.03■■□□□ 1.44
TNRC6AQ8NDV7 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC24.03■■□□□ 1.44
TNRC6AQ8NDV7 TPT1-202ENST00000379055 948 ntTSL 2 BASIC24.02■■□□□ 1.43
TNRC6AQ8NDV7 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC24.02■■□□□ 1.43
TNRC6AQ8NDV7 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC24.02■■□□□ 1.43
TNRC6AQ8NDV7 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC24.01■■□□□ 1.43
TNRC6AQ8NDV7 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC24■■□□□ 1.43
TNRC6AQ8NDV7 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC24■■□□□ 1.43
TNRC6AQ8NDV7 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC24■■□□□ 1.43
TNRC6AQ8NDV7 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC24■■□□□ 1.43
TNRC6AQ8NDV7 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC24■■□□□ 1.43
TNRC6AQ8NDV7 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC23.99■■□□□ 1.43
TNRC6AQ8NDV7 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC23.99■■□□□ 1.43
TNRC6AQ8NDV7 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC23.99■■□□□ 1.43
TNRC6AQ8NDV7 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC23.99■■□□□ 1.43
TNRC6AQ8NDV7 CNIH2-203ENST00000528852 1524 ntAPPRIS ALT1 TSL 1 (best) BASIC23.99■■□□□ 1.43
TNRC6AQ8NDV7 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC23.98■■□□□ 1.43
TNRC6AQ8NDV7 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC23.98■■□□□ 1.43
TNRC6AQ8NDV7 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC23.98■■□□□ 1.43
TNRC6AQ8NDV7 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC23.97■■□□□ 1.43
TNRC6AQ8NDV7 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC23.97■■□□□ 1.43
TNRC6AQ8NDV7 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
TNRC6AQ8NDV7 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC23.97■■□□□ 1.43
TNRC6AQ8NDV7 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC23.97■■□□□ 1.43
TNRC6AQ8NDV7 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC23.96■■□□□ 1.43
TNRC6AQ8NDV7 CEP120-209ENST00000515110 606 ntTSL 3 BASIC23.96■■□□□ 1.43
TNRC6AQ8NDV7 AC010864.1-201ENST00000609407 1511 ntBASIC23.95■■□□□ 1.43
TNRC6AQ8NDV7 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC23.95■■□□□ 1.42
TNRC6AQ8NDV7 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC23.95■■□□□ 1.42
TNRC6AQ8NDV7 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC23.95■■□□□ 1.42
TNRC6AQ8NDV7 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC23.95■■□□□ 1.42
TNRC6AQ8NDV7 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
TNRC6AQ8NDV7 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC23.94■■□□□ 1.42
TNRC6AQ8NDV7 C11orf96-203ENST00000617612 1294 ntAPPRIS P1 BASIC23.94■■□□□ 1.42
TNRC6AQ8NDV7 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
TNRC6AQ8NDV7 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC23.92■■□□□ 1.42
TNRC6AQ8NDV7 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC23.92■■□□□ 1.42
TNRC6AQ8NDV7 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC23.92■■□□□ 1.42
TNRC6AQ8NDV7 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC23.92■■□□□ 1.42
TNRC6AQ8NDV7 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC23.91■■□□□ 1.42
TNRC6AQ8NDV7 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC23.91■■□□□ 1.42
TNRC6AQ8NDV7 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC23.91■■□□□ 1.42
TNRC6AQ8NDV7 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC23.9■■□□□ 1.42
TNRC6AQ8NDV7 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC23.9■■□□□ 1.42
TNRC6AQ8NDV7 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC23.9■■□□□ 1.42
TNRC6AQ8NDV7 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC23.9■■□□□ 1.42
TNRC6AQ8NDV7 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC23.89■■□□□ 1.42
TNRC6AQ8NDV7 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
TNRC6AQ8NDV7 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC23.89■■□□□ 1.42
TNRC6AQ8NDV7 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC23.89■■□□□ 1.41
TNRC6AQ8NDV7 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC23.88■■□□□ 1.41
TNRC6AQ8NDV7 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC23.88■■□□□ 1.41
TNRC6AQ8NDV7 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC23.87■■□□□ 1.41
TNRC6AQ8NDV7 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC23.87■■□□□ 1.41
TNRC6AQ8NDV7 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC23.87■■□□□ 1.41
TNRC6AQ8NDV7 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC23.87■■□□□ 1.41
TNRC6AQ8NDV7 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC23.86■■□□□ 1.41
TNRC6AQ8NDV7 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC23.85■■□□□ 1.41
TNRC6AQ8NDV7 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC23.85■■□□□ 1.41
TNRC6AQ8NDV7 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC23.84■■□□□ 1.41
TNRC6AQ8NDV7 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC23.84■■□□□ 1.41
TNRC6AQ8NDV7 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC23.83■■□□□ 1.41
TNRC6AQ8NDV7 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC23.83■■□□□ 1.41
TNRC6AQ8NDV7 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
TNRC6AQ8NDV7 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC23.83■■□□□ 1.41
TNRC6AQ8NDV7 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC23.83■■□□□ 1.41
TNRC6AQ8NDV7 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC23.82■■□□□ 1.4
TNRC6AQ8NDV7 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC23.82■■□□□ 1.4
TNRC6AQ8NDV7 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC23.81■■□□□ 1.4
TNRC6AQ8NDV7 ENHO-201ENST00000399775 1082 ntAPPRIS P1 TSL 2 BASIC23.8■■□□□ 1.4
TNRC6AQ8NDV7 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
TNRC6AQ8NDV7 NTF6A-201ENST00000591175 560 ntBASIC23.8■■□□□ 1.4
TNRC6AQ8NDV7 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC23.8■■□□□ 1.4
TNRC6AQ8NDV7 RNF126P1-201ENST00000567452 1320 ntBASIC23.8■■□□□ 1.4
TNRC6AQ8NDV7 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC23.8■■□□□ 1.4
TNRC6AQ8NDV7 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC23.8■■□□□ 1.4
TNRC6AQ8NDV7 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC23.8■■□□□ 1.4
TNRC6AQ8NDV7 AC022413.1-201ENST00000624602 984 ntBASIC23.8■■□□□ 1.4
TNRC6AQ8NDV7 WHAMMP2-203ENST00000563942 1603 ntBASIC23.79■■□□□ 1.4
TNRC6AQ8NDV7 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC23.78■■□□□ 1.4
TNRC6AQ8NDV7 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC23.78■■□□□ 1.4
TNRC6AQ8NDV7 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC23.78■■□□□ 1.4
TNRC6AQ8NDV7 AC012354.3-201ENST00000623734 483 ntBASIC23.78■■□□□ 1.4
Retrieved 100 of 98,524 protein–RNA pairs in 63 ms