Protein–RNA interactions for Protein: Q8N7A1

KLHDC1, Kelch domain-containing protein 1, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC1Q8N7A1 DUX4L14-201ENST00000621227 1267 ntBASIC20.72■□□□□ 0.91
KLHDC1Q8N7A1 JMJD8-216ENST00000609261 1901 ntAPPRIS ALT2 TSL 1 (best) BASIC20.72■□□□□ 0.91
KLHDC1Q8N7A1 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
KLHDC1Q8N7A1 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
KLHDC1Q8N7A1 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.71■□□□□ 0.91
KLHDC1Q8N7A1 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
KLHDC1Q8N7A1 MIR639-201ENST00000384974 98 ntBASIC20.71■□□□□ 0.91
KLHDC1Q8N7A1 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC20.71■□□□□ 0.91
KLHDC1Q8N7A1 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC20.71■□□□□ 0.91
KLHDC1Q8N7A1 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC20.71■□□□□ 0.91
KLHDC1Q8N7A1 GDI1-215ENST00000630693 786 ntTSL 4 BASIC20.71■□□□□ 0.91
KLHDC1Q8N7A1 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
KLHDC1Q8N7A1 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
KLHDC1Q8N7A1 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC20.7■□□□□ 0.9
KLHDC1Q8N7A1 MIR3648-2-201ENST00000581792 180 ntBASIC20.7■□□□□ 0.9
KLHDC1Q8N7A1 AC016575.1-201ENST00000607026 382 ntBASIC20.7■□□□□ 0.9
KLHDC1Q8N7A1 MIR3648-1-201ENST00000615959 180 ntBASIC20.7■□□□□ 0.9
KLHDC1Q8N7A1 ZCCHC2-201ENST00000269499 5959 ntAPPRIS P2 TSL 5 BASIC20.7■□□□□ 0.9
KLHDC1Q8N7A1 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
KLHDC1Q8N7A1 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
KLHDC1Q8N7A1 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
KLHDC1Q8N7A1 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
KLHDC1Q8N7A1 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
KLHDC1Q8N7A1 AGPS-202ENST00000409888 815 ntTSL 4 BASIC20.69■□□□□ 0.9
KLHDC1Q8N7A1 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC20.69■□□□□ 0.9
KLHDC1Q8N7A1 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC20.69■□□□□ 0.9
KLHDC1Q8N7A1 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
KLHDC1Q8N7A1 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC20.69■□□□□ 0.9
KLHDC1Q8N7A1 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
KLHDC1Q8N7A1 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
KLHDC1Q8N7A1 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC20.68■□□□□ 0.9
KLHDC1Q8N7A1 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
KLHDC1Q8N7A1 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
KLHDC1Q8N7A1 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC20.68■□□□□ 0.9
KLHDC1Q8N7A1 MIR4449-201ENST00000578365 66 ntBASIC20.68■□□□□ 0.9
KLHDC1Q8N7A1 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
KLHDC1Q8N7A1 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
KLHDC1Q8N7A1 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
KLHDC1Q8N7A1 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
KLHDC1Q8N7A1 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC20.67■□□□□ 0.9
KLHDC1Q8N7A1 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
KLHDC1Q8N7A1 CR559946.2-201ENST00000623684 991 ntBASIC20.66■□□□□ 0.9
KLHDC1Q8N7A1 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
KLHDC1Q8N7A1 EI24-212ENST00000615917 1407 ntTSL 2 BASIC20.66■□□□□ 0.9
KLHDC1Q8N7A1 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC20.65■□□□□ 0.9
KLHDC1Q8N7A1 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
KLHDC1Q8N7A1 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC20.64■□□□□ 0.89
KLHDC1Q8N7A1 SOX1-201ENST00000330949 2842 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
KLHDC1Q8N7A1 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC20.64■□□□□ 0.89
KLHDC1Q8N7A1 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
KLHDC1Q8N7A1 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC20.64■□□□□ 0.89
KLHDC1Q8N7A1 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
KLHDC1Q8N7A1 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
KLHDC1Q8N7A1 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
KLHDC1Q8N7A1 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
KLHDC1Q8N7A1 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
KLHDC1Q8N7A1 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
KLHDC1Q8N7A1 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC20.62■□□□□ 0.89
KLHDC1Q8N7A1 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC20.61■□□□□ 0.89
KLHDC1Q8N7A1 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
KLHDC1Q8N7A1 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC20.61■□□□□ 0.89
KLHDC1Q8N7A1 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
KLHDC1Q8N7A1 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
KLHDC1Q8N7A1 CALM3-209ENST00000597743 577 ntTSL 4 BASIC20.6■□□□□ 0.89
KLHDC1Q8N7A1 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
KLHDC1Q8N7A1 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
KLHDC1Q8N7A1 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
KLHDC1Q8N7A1 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
KLHDC1Q8N7A1 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
KLHDC1Q8N7A1 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC20.58■□□□□ 0.89
KLHDC1Q8N7A1 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC20.58■□□□□ 0.89
KLHDC1Q8N7A1 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
KLHDC1Q8N7A1 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
KLHDC1Q8N7A1 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
KLHDC1Q8N7A1 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC20.57■□□□□ 0.88
KLHDC1Q8N7A1 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
KLHDC1Q8N7A1 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
KLHDC1Q8N7A1 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
KLHDC1Q8N7A1 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC20.56■□□□□ 0.88
KLHDC1Q8N7A1 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC20.56■□□□□ 0.88
KLHDC1Q8N7A1 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
KLHDC1Q8N7A1 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
KLHDC1Q8N7A1 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
KLHDC1Q8N7A1 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC20.55■□□□□ 0.88
KLHDC1Q8N7A1 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC20.55■□□□□ 0.88
KLHDC1Q8N7A1 DUX4L13-201ENST00000554103 1267 ntBASIC20.55■□□□□ 0.88
KLHDC1Q8N7A1 DUX4L15-201ENST00000611059 1267 ntBASIC20.55■□□□□ 0.88
KLHDC1Q8N7A1 DUX4L23-201ENST00000615195 1269 ntBASIC20.55■□□□□ 0.88
KLHDC1Q8N7A1 DUX4L24-201ENST00000617576 1269 ntBASIC20.55■□□□□ 0.88
KLHDC1Q8N7A1 DUX4L22-201ENST00000618238 1269 ntBASIC20.55■□□□□ 0.88
KLHDC1Q8N7A1 DUX4L20-201ENST00000619712 1269 ntBASIC20.55■□□□□ 0.88
KLHDC1Q8N7A1 DUX4L21-201ENST00000622058 1269 ntBASIC20.55■□□□□ 0.88
KLHDC1Q8N7A1 DUX4L10-201ENST00000622460 1267 ntBASIC20.55■□□□□ 0.88
KLHDC1Q8N7A1 DUX4L25-201ENST00000624915 1269 ntBASIC20.55■□□□□ 0.88
KLHDC1Q8N7A1 SHF-206ENST00000560471 2499 ntTSL 5 BASIC20.54■□□□□ 0.88
KLHDC1Q8N7A1 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
KLHDC1Q8N7A1 RAP2A-201ENST00000245304 5487 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
KLHDC1Q8N7A1 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
KLHDC1Q8N7A1 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
KLHDC1Q8N7A1 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 28.5 ms