Protein–RNA interactions for Protein: Q8IZ52

CHPF, Chondroitin sulfate synthase 2, humanhuman

Predictions only

Length 775 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHPFQ8IZ52 HES6-205ENST00000409356 528 ntTSL 2 BASIC26.58■■□□□ 1.85
CHPFQ8IZ52 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC26.58■■□□□ 1.85
CHPFQ8IZ52 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC26.58■■□□□ 1.85
CHPFQ8IZ52 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
CHPFQ8IZ52 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC26.56■■□□□ 1.84
CHPFQ8IZ52 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC26.56■■□□□ 1.84
CHPFQ8IZ52 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC26.56■■□□□ 1.84
CHPFQ8IZ52 METRNL-202ENST00000570778 967 ntTSL 5 BASIC26.55■■□□□ 1.84
CHPFQ8IZ52 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC26.54■■□□□ 1.84
CHPFQ8IZ52 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC26.54■■□□□ 1.84
CHPFQ8IZ52 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC26.54■■□□□ 1.84
CHPFQ8IZ52 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC26.54■■□□□ 1.84
CHPFQ8IZ52 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC26.54■■□□□ 1.84
CHPFQ8IZ52 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
CHPFQ8IZ52 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC26.54■■□□□ 1.84
CHPFQ8IZ52 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC26.53■■□□□ 1.84
CHPFQ8IZ52 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC26.53■■□□□ 1.84
CHPFQ8IZ52 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC26.53■■□□□ 1.84
CHPFQ8IZ52 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC26.52■■□□□ 1.84
CHPFQ8IZ52 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC26.52■■□□□ 1.84
CHPFQ8IZ52 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC26.51■■□□□ 1.83
CHPFQ8IZ52 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC26.51■■□□□ 1.83
CHPFQ8IZ52 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC26.51■■□□□ 1.83
CHPFQ8IZ52 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC26.51■■□□□ 1.83
CHPFQ8IZ52 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
CHPFQ8IZ52 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC26.5■■□□□ 1.83
CHPFQ8IZ52 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC26.5■■□□□ 1.83
CHPFQ8IZ52 HSD17B1P1-201ENST00000590052 955 ntBASIC26.5■■□□□ 1.83
CHPFQ8IZ52 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC26.49■■□□□ 1.83
CHPFQ8IZ52 LINC00273-201ENST00000539813 1452 ntBASIC26.49■■□□□ 1.83
CHPFQ8IZ52 TUSC1-201ENST00000358022 2052 ntAPPRIS P1 BASIC26.48■■□□□ 1.83
CHPFQ8IZ52 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC26.47■■□□□ 1.83
CHPFQ8IZ52 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
CHPFQ8IZ52 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
CHPFQ8IZ52 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
CHPFQ8IZ52 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
CHPFQ8IZ52 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC26.46■■□□□ 1.83
CHPFQ8IZ52 ABHD17AP3-201ENST00000503096 1137 ntBASIC26.46■■□□□ 1.83
CHPFQ8IZ52 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC26.46■■□□□ 1.83
CHPFQ8IZ52 CHST11-202ENST00000546689 756 ntTSL 2 BASIC26.45■■□□□ 1.82
CHPFQ8IZ52 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC26.45■■□□□ 1.82
CHPFQ8IZ52 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC26.44■■□□□ 1.82
CHPFQ8IZ52 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC26.44■■□□□ 1.82
CHPFQ8IZ52 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC26.44■■□□□ 1.82
CHPFQ8IZ52 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC26.44■■□□□ 1.82
CHPFQ8IZ52 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC26.43■■□□□ 1.82
CHPFQ8IZ52 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC26.43■■□□□ 1.82
CHPFQ8IZ52 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC26.42■■□□□ 1.82
CHPFQ8IZ52 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC26.42■■□□□ 1.82
CHPFQ8IZ52 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC26.41■■□□□ 1.82
CHPFQ8IZ52 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC26.41■■□□□ 1.82
CHPFQ8IZ52 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC26.41■■□□□ 1.82
CHPFQ8IZ52 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC26.4■■□□□ 1.82
CHPFQ8IZ52 BRD4-212ENST00000630599 726 ntTSL 2 BASIC26.4■■□□□ 1.82
CHPFQ8IZ52 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
CHPFQ8IZ52 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.82
CHPFQ8IZ52 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC26.39■■□□□ 1.82
CHPFQ8IZ52 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC26.39■■□□□ 1.82
CHPFQ8IZ52 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC26.38■■□□□ 1.81
CHPFQ8IZ52 GLT8D1-201ENST00000266014 1849 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
CHPFQ8IZ52 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC26.37■■□□□ 1.81
CHPFQ8IZ52 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC26.37■■□□□ 1.81
CHPFQ8IZ52 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC26.37■■□□□ 1.81
CHPFQ8IZ52 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC26.37■■□□□ 1.81
CHPFQ8IZ52 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
CHPFQ8IZ52 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC26.36■■□□□ 1.81
CHPFQ8IZ52 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC26.36■■□□□ 1.81
CHPFQ8IZ52 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC26.35■■□□□ 1.81
CHPFQ8IZ52 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC26.35■■□□□ 1.81
CHPFQ8IZ52 AC127502.1-201ENST00000399971 1502 ntBASIC26.34■■□□□ 1.81
CHPFQ8IZ52 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC26.34■■□□□ 1.81
CHPFQ8IZ52 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
CHPFQ8IZ52 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
CHPFQ8IZ52 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
CHPFQ8IZ52 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
CHPFQ8IZ52 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC26.34■■□□□ 1.81
CHPFQ8IZ52 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC26.34■■□□□ 1.81
CHPFQ8IZ52 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC26.34■■□□□ 1.81
CHPFQ8IZ52 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC26.34■■□□□ 1.81
CHPFQ8IZ52 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC26.34■■□□□ 1.81
CHPFQ8IZ52 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
CHPFQ8IZ52 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
CHPFQ8IZ52 FOXD3-201ENST00000371116 2086 ntAPPRIS P1 BASIC26.31■■□□□ 1.8
CHPFQ8IZ52 KLHL35-204ENST00000539798 1936 ntAPPRIS P1 TSL 1 (best) BASIC26.31■■□□□ 1.8
CHPFQ8IZ52 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC26.3■■□□□ 1.8
CHPFQ8IZ52 RAMP2-AS1-202ENST00000589716 1985 ntTSL 5 BASIC26.3■■□□□ 1.8
CHPFQ8IZ52 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC26.3■■□□□ 1.8
CHPFQ8IZ52 AL135925.1-201ENST00000605920 1701 ntBASIC26.3■■□□□ 1.8
CHPFQ8IZ52 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC26.29■■□□□ 1.8
CHPFQ8IZ52 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC26.29■■□□□ 1.8
CHPFQ8IZ52 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC26.29■■□□□ 1.8
CHPFQ8IZ52 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC26.28■■□□□ 1.8
CHPFQ8IZ52 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
CHPFQ8IZ52 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC26.28■■□□□ 1.8
CHPFQ8IZ52 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC26.28■■□□□ 1.8
CHPFQ8IZ52 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC26.27■■□□□ 1.8
CHPFQ8IZ52 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC26.27■■□□□ 1.8
CHPFQ8IZ52 SRP68-213ENST00000629930 165 ntTSL 5 BASIC26.27■■□□□ 1.8
CHPFQ8IZ52 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC26.27■■□□□ 1.8
CHPFQ8IZ52 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC26.26■■□□□ 1.79
Retrieved 100 of 98,524 protein–RNA pairs in 13.8 ms