Protein–RNA interactions for Protein: Q8IYA8

CCDC36, Interactor of HORMAD1 protein 1, humanhuman

Predictions only

Length 594 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC36Q8IYA8 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC22.89■■□□□ 1.25
CCDC36Q8IYA8 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC22.89■■□□□ 1.25
CCDC36Q8IYA8 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC22.88■■□□□ 1.25
CCDC36Q8IYA8 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
CCDC36Q8IYA8 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.25
CCDC36Q8IYA8 NPAS3-201ENST00000346562 5847 ntAPPRIS P3 TSL 1 (best) BASIC22.88■■□□□ 1.25
CCDC36Q8IYA8 ABCB10P3-201ENST00000561950 2166 ntBASIC22.88■■□□□ 1.25
CCDC36Q8IYA8 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC22.87■■□□□ 1.25
CCDC36Q8IYA8 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC22.87■■□□□ 1.25
CCDC36Q8IYA8 ST7-AS1-201ENST00000456775 1889 ntBASIC22.87■■□□□ 1.25
CCDC36Q8IYA8 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC22.87■■□□□ 1.25
CCDC36Q8IYA8 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
CCDC36Q8IYA8 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC22.86■■□□□ 1.25
CCDC36Q8IYA8 EPB41L4B-202ENST00000374566 5800 ntAPPRIS P4 TSL 1 (best) BASIC22.86■■□□□ 1.25
CCDC36Q8IYA8 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
CCDC36Q8IYA8 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC22.86■■□□□ 1.25
CCDC36Q8IYA8 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
CCDC36Q8IYA8 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC22.85■■□□□ 1.25
CCDC36Q8IYA8 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
CCDC36Q8IYA8 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC22.84■■□□□ 1.25
CCDC36Q8IYA8 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC22.84■■□□□ 1.25
CCDC36Q8IYA8 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC22.84■■□□□ 1.25
CCDC36Q8IYA8 SHF-206ENST00000560471 2499 ntTSL 5 BASIC22.84■■□□□ 1.25
CCDC36Q8IYA8 EI24-212ENST00000615917 1407 ntTSL 2 BASIC22.83■■□□□ 1.25
CCDC36Q8IYA8 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC22.83■■□□□ 1.25
CCDC36Q8IYA8 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
CCDC36Q8IYA8 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC22.82■■□□□ 1.24
CCDC36Q8IYA8 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
CCDC36Q8IYA8 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC22.82■■□□□ 1.24
CCDC36Q8IYA8 MLEC-202ENST00000412616 841 ntTSL 3 BASIC22.82■■□□□ 1.24
CCDC36Q8IYA8 DUX4L29-201ENST00000425409 679 ntBASIC22.82■■□□□ 1.24
CCDC36Q8IYA8 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC22.82■■□□□ 1.24
CCDC36Q8IYA8 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC22.82■■□□□ 1.24
CCDC36Q8IYA8 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC22.81■■□□□ 1.24
CCDC36Q8IYA8 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC22.81■■□□□ 1.24
CCDC36Q8IYA8 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
CCDC36Q8IYA8 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
CCDC36Q8IYA8 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC22.8■■□□□ 1.24
CCDC36Q8IYA8 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC22.8■■□□□ 1.24
CCDC36Q8IYA8 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC22.8■■□□□ 1.24
CCDC36Q8IYA8 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC22.8■■□□□ 1.24
CCDC36Q8IYA8 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC22.8■■□□□ 1.24
CCDC36Q8IYA8 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC22.79■■□□□ 1.24
CCDC36Q8IYA8 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
CCDC36Q8IYA8 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC22.78■■□□□ 1.24
CCDC36Q8IYA8 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC22.78■■□□□ 1.24
CCDC36Q8IYA8 ABCB10P1-201ENST00000614297 2181 ntBASIC22.78■■□□□ 1.24
CCDC36Q8IYA8 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC22.78■■□□□ 1.24
CCDC36Q8IYA8 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC22.78■■□□□ 1.24
CCDC36Q8IYA8 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
CCDC36Q8IYA8 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC22.78■■□□□ 1.24
CCDC36Q8IYA8 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
CCDC36Q8IYA8 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC22.77■■□□□ 1.24
CCDC36Q8IYA8 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.24
CCDC36Q8IYA8 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC22.77■■□□□ 1.23
CCDC36Q8IYA8 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC22.76■■□□□ 1.23
CCDC36Q8IYA8 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC22.76■■□□□ 1.23
CCDC36Q8IYA8 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC22.76■■□□□ 1.23
CCDC36Q8IYA8 AFDN-201ENST00000344191 5249 ntTSL 5 BASIC22.74■■□□□ 1.23
CCDC36Q8IYA8 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC22.74■■□□□ 1.23
CCDC36Q8IYA8 FAM220A-201ENST00000313324 2214 ntTSL 1 (best) BASIC22.74■■□□□ 1.23
CCDC36Q8IYA8 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC22.73■■□□□ 1.23
CCDC36Q8IYA8 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
CCDC36Q8IYA8 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
CCDC36Q8IYA8 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC22.73■■□□□ 1.23
CCDC36Q8IYA8 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC22.73■■□□□ 1.23
CCDC36Q8IYA8 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
CCDC36Q8IYA8 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC22.72■■□□□ 1.23
CCDC36Q8IYA8 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC22.72■■□□□ 1.23
CCDC36Q8IYA8 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC22.71■■□□□ 1.23
CCDC36Q8IYA8 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
CCDC36Q8IYA8 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
CCDC36Q8IYA8 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC22.71■■□□□ 1.23
CCDC36Q8IYA8 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
CCDC36Q8IYA8 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC22.71■■□□□ 1.23
CCDC36Q8IYA8 AC021231.2-201ENST00000594613 730 ntBASIC22.71■■□□□ 1.23
CCDC36Q8IYA8 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC22.71■■□□□ 1.23
CCDC36Q8IYA8 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC22.7■■□□□ 1.22
CCDC36Q8IYA8 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC22.7■■□□□ 1.22
CCDC36Q8IYA8 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC22.7■■□□□ 1.22
CCDC36Q8IYA8 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC22.7■■□□□ 1.22
CCDC36Q8IYA8 HGH1-207ENST00000628266 258 ntTSL 5 BASIC22.7■■□□□ 1.22
CCDC36Q8IYA8 AC127502.1-201ENST00000399971 1502 ntBASIC22.7■■□□□ 1.22
CCDC36Q8IYA8 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
CCDC36Q8IYA8 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC22.69■■□□□ 1.22
CCDC36Q8IYA8 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC22.69■■□□□ 1.22
CCDC36Q8IYA8 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC22.69■■□□□ 1.22
CCDC36Q8IYA8 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CCDC36Q8IYA8 JAG2-202ENST00000347004 5720 ntTSL 1 (best) BASIC22.68■■□□□ 1.22
CCDC36Q8IYA8 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC22.68■■□□□ 1.22
CCDC36Q8IYA8 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC22.68■■□□□ 1.22
CCDC36Q8IYA8 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC22.68■■□□□ 1.22
CCDC36Q8IYA8 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC22.68■■□□□ 1.22
CCDC36Q8IYA8 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC22.67■■□□□ 1.22
CCDC36Q8IYA8 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC22.67■■□□□ 1.22
CCDC36Q8IYA8 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC22.67■■□□□ 1.22
CCDC36Q8IYA8 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CCDC36Q8IYA8 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
CCDC36Q8IYA8 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC22.66■■□□□ 1.22
CCDC36Q8IYA8 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC22.66■■□□□ 1.22
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms