Protein–RNA interactions for Protein: Q8IUM7

NPAS4, Neuronal PAS domain-containing protein 4, humanhuman

Predictions only

Length 802 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS4Q8IUM7 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC28.39■■■□□ 2.14
NPAS4Q8IUM7 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC28.39■■■□□ 2.14
NPAS4Q8IUM7 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC28.39■■■□□ 2.14
NPAS4Q8IUM7 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC28.38■■■□□ 2.13
NPAS4Q8IUM7 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC28.38■■■□□ 2.13
NPAS4Q8IUM7 CHST11-202ENST00000546689 756 ntTSL 2 BASIC28.38■■■□□ 2.13
NPAS4Q8IUM7 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC28.38■■■□□ 2.13
NPAS4Q8IUM7 SRP68-213ENST00000629930 165 ntTSL 5 BASIC28.37■■■□□ 2.13
NPAS4Q8IUM7 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC28.37■■■□□ 2.13
NPAS4Q8IUM7 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
NPAS4Q8IUM7 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
NPAS4Q8IUM7 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC28.36■■■□□ 2.13
NPAS4Q8IUM7 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC28.36■■■□□ 2.13
NPAS4Q8IUM7 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC28.36■■■□□ 2.13
NPAS4Q8IUM7 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC28.36■■■□□ 2.13
NPAS4Q8IUM7 AC010864.1-201ENST00000609407 1511 ntBASIC28.36■■■□□ 2.13
NPAS4Q8IUM7 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
NPAS4Q8IUM7 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC28.35■■■□□ 2.13
NPAS4Q8IUM7 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC28.35■■■□□ 2.13
NPAS4Q8IUM7 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC28.34■■■□□ 2.13
NPAS4Q8IUM7 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC28.34■■■□□ 2.13
NPAS4Q8IUM7 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC28.34■■■□□ 2.13
NPAS4Q8IUM7 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC28.33■■■□□ 2.13
NPAS4Q8IUM7 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC28.32■■■□□ 2.12
NPAS4Q8IUM7 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC28.32■■■□□ 2.12
NPAS4Q8IUM7 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC28.32■■■□□ 2.12
NPAS4Q8IUM7 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC28.31■■■□□ 2.12
NPAS4Q8IUM7 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC28.31■■■□□ 2.12
NPAS4Q8IUM7 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC28.3■■■□□ 2.12
NPAS4Q8IUM7 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC28.29■■■□□ 2.12
NPAS4Q8IUM7 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC28.28■■■□□ 2.12
NPAS4Q8IUM7 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC28.26■■■□□ 2.12
NPAS4Q8IUM7 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC28.25■■■□□ 2.11
NPAS4Q8IUM7 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC28.25■■■□□ 2.11
NPAS4Q8IUM7 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC28.24■■■□□ 2.11
NPAS4Q8IUM7 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC28.23■■■□□ 2.11
NPAS4Q8IUM7 RARRES2P2-201ENST00000394842 485 ntBASIC28.23■■■□□ 2.11
NPAS4Q8IUM7 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC28.23■■■□□ 2.11
NPAS4Q8IUM7 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC28.23■■■□□ 2.11
NPAS4Q8IUM7 TPT1-202ENST00000379055 948 ntTSL 2 BASIC28.22■■■□□ 2.11
NPAS4Q8IUM7 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
NPAS4Q8IUM7 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
NPAS4Q8IUM7 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
NPAS4Q8IUM7 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC28.21■■■□□ 2.11
NPAS4Q8IUM7 GPX1-201ENST00000419349 1106 ntBASIC28.2■■■□□ 2.1
NPAS4Q8IUM7 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
NPAS4Q8IUM7 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC28.19■■■□□ 2.1
NPAS4Q8IUM7 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
NPAS4Q8IUM7 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
NPAS4Q8IUM7 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
NPAS4Q8IUM7 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
NPAS4Q8IUM7 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC28.19■■■□□ 2.1
NPAS4Q8IUM7 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC28.18■■■□□ 2.1
NPAS4Q8IUM7 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
NPAS4Q8IUM7 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
NPAS4Q8IUM7 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
NPAS4Q8IUM7 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC28.17■■■□□ 2.1
NPAS4Q8IUM7 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC28.17■■■□□ 2.1
NPAS4Q8IUM7 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC28.16■■■□□ 2.1
NPAS4Q8IUM7 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC28.16■■■□□ 2.1
NPAS4Q8IUM7 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC28.16■■■□□ 2.1
NPAS4Q8IUM7 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC28.15■■■□□ 2.1
NPAS4Q8IUM7 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC28.15■■■□□ 2.1
NPAS4Q8IUM7 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC28.15■■■□□ 2.1
NPAS4Q8IUM7 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC28.14■■■□□ 2.1
NPAS4Q8IUM7 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC28.14■■■□□ 2.09
NPAS4Q8IUM7 ABHD17AP5-201ENST00000580133 923 ntBASIC28.13■■■□□ 2.09
NPAS4Q8IUM7 RNF126P1-201ENST00000567452 1320 ntBASIC28.13■■■□□ 2.09
NPAS4Q8IUM7 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC28.12■■■□□ 2.09
NPAS4Q8IUM7 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC28.11■■■□□ 2.09
NPAS4Q8IUM7 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC28.1■■■□□ 2.09
NPAS4Q8IUM7 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC28.1■■■□□ 2.09
NPAS4Q8IUM7 AC127502.1-201ENST00000399971 1502 ntBASIC28.1■■■□□ 2.09
NPAS4Q8IUM7 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC28.1■■■□□ 2.09
NPAS4Q8IUM7 CEP120-209ENST00000515110 606 ntTSL 3 BASIC28.1■■■□□ 2.09
NPAS4Q8IUM7 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC28.1■■■□□ 2.09
NPAS4Q8IUM7 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC28.09■■■□□ 2.09
NPAS4Q8IUM7 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
NPAS4Q8IUM7 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
NPAS4Q8IUM7 AC008813.1-201ENST00000536597 885 ntBASIC28.08■■■□□ 2.09
NPAS4Q8IUM7 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC28.08■■■□□ 2.09
NPAS4Q8IUM7 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC28.07■■■□□ 2.08
NPAS4Q8IUM7 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
NPAS4Q8IUM7 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC28.06■■■□□ 2.08
NPAS4Q8IUM7 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC28.06■■■□□ 2.08
NPAS4Q8IUM7 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC28.06■■■□□ 2.08
NPAS4Q8IUM7 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC28.06■■■□□ 2.08
NPAS4Q8IUM7 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC28.05■■■□□ 2.08
NPAS4Q8IUM7 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC28.05■■■□□ 2.08
NPAS4Q8IUM7 AC135983.2-203ENST00000454486 1613 ntBASIC28.05■■■□□ 2.08
NPAS4Q8IUM7 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC28.05■■■□□ 2.08
NPAS4Q8IUM7 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC28.04■■■□□ 2.08
NPAS4Q8IUM7 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC28.04■■■□□ 2.08
NPAS4Q8IUM7 WHAMMP2-203ENST00000563942 1603 ntBASIC28.03■■■□□ 2.08
NPAS4Q8IUM7 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC28.03■■■□□ 2.08
NPAS4Q8IUM7 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC28.02■■■□□ 2.08
NPAS4Q8IUM7 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC28.02■■■□□ 2.08
NPAS4Q8IUM7 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC28.01■■■□□ 2.07
NPAS4Q8IUM7 AC022413.1-201ENST00000624602 984 ntBASIC28.01■■■□□ 2.07
NPAS4Q8IUM7 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC28■■■□□ 2.07
Retrieved 100 of 98,524 protein–RNA pairs in 13.6 ms