Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC16.51■□□□□ 0.23
MRPL55Q7Z7F7 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC16.51■□□□□ 0.23
MRPL55Q7Z7F7 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
MRPL55Q7Z7F7 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
MRPL55Q7Z7F7 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
MRPL55Q7Z7F7 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
MRPL55Q7Z7F7 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
MRPL55Q7Z7F7 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
MRPL55Q7Z7F7 CAHM-201ENST00000604200 896 ntBASIC16.49■□□□□ 0.23
MRPL55Q7Z7F7 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
MRPL55Q7Z7F7 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
MRPL55Q7Z7F7 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
MRPL55Q7Z7F7 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
MRPL55Q7Z7F7 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
MRPL55Q7Z7F7 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
MRPL55Q7Z7F7 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC16.47■□□□□ 0.23
MRPL55Q7Z7F7 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
MRPL55Q7Z7F7 AC142086.6-201ENST00000621154 1765 ntBASIC16.46■□□□□ 0.23
MRPL55Q7Z7F7 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
MRPL55Q7Z7F7 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
MRPL55Q7Z7F7 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC16.46■□□□□ 0.23
MRPL55Q7Z7F7 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
MRPL55Q7Z7F7 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC16.46■□□□□ 0.22
MRPL55Q7Z7F7 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC16.45■□□□□ 0.22
MRPL55Q7Z7F7 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
MRPL55Q7Z7F7 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
MRPL55Q7Z7F7 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC16.44■□□□□ 0.22
MRPL55Q7Z7F7 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC16.44■□□□□ 0.22
MRPL55Q7Z7F7 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
MRPL55Q7Z7F7 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC16.43■□□□□ 0.22
MRPL55Q7Z7F7 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
MRPL55Q7Z7F7 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC16.43■□□□□ 0.22
MRPL55Q7Z7F7 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
MRPL55Q7Z7F7 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
MRPL55Q7Z7F7 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
MRPL55Q7Z7F7 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
MRPL55Q7Z7F7 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
MRPL55Q7Z7F7 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
MRPL55Q7Z7F7 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
MRPL55Q7Z7F7 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
MRPL55Q7Z7F7 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC16.41■□□□□ 0.22
MRPL55Q7Z7F7 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
MRPL55Q7Z7F7 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
MRPL55Q7Z7F7 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
MRPL55Q7Z7F7 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
MRPL55Q7Z7F7 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC16.4■□□□□ 0.22
MRPL55Q7Z7F7 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC16.4■□□□□ 0.22
MRPL55Q7Z7F7 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
MRPL55Q7Z7F7 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC16.39■□□□□ 0.21
MRPL55Q7Z7F7 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC16.39■□□□□ 0.21
MRPL55Q7Z7F7 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
MRPL55Q7Z7F7 DRD5P2-201ENST00000421395 2012 ntBASIC16.39■□□□□ 0.21
MRPL55Q7Z7F7 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
MRPL55Q7Z7F7 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
MRPL55Q7Z7F7 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
MRPL55Q7Z7F7 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
MRPL55Q7Z7F7 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
MRPL55Q7Z7F7 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
MRPL55Q7Z7F7 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
MRPL55Q7Z7F7 AP004833.2-201ENST00000532228 1454 ntBASIC16.38■□□□□ 0.21
MRPL55Q7Z7F7 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
MRPL55Q7Z7F7 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
MRPL55Q7Z7F7 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC16.37■□□□□ 0.21
MRPL55Q7Z7F7 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
MRPL55Q7Z7F7 MIR762-201ENST00000390236 83 ntBASIC16.37■□□□□ 0.21
MRPL55Q7Z7F7 RPS2-209ENST00000529806 993 ntTSL 3 BASIC16.37■□□□□ 0.21
MRPL55Q7Z7F7 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC16.37■□□□□ 0.21
MRPL55Q7Z7F7 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
MRPL55Q7Z7F7 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
MRPL55Q7Z7F7 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
MRPL55Q7Z7F7 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
MRPL55Q7Z7F7 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
MRPL55Q7Z7F7 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
MRPL55Q7Z7F7 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
MRPL55Q7Z7F7 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
MRPL55Q7Z7F7 CHML-205ENST00000638160 705 ntTSL 3 BASIC16.36■□□□□ 0.21
MRPL55Q7Z7F7 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
MRPL55Q7Z7F7 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
MRPL55Q7Z7F7 AC127502.1-201ENST00000399971 1502 ntBASIC16.35■□□□□ 0.21
MRPL55Q7Z7F7 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC16.35■□□□□ 0.21
MRPL55Q7Z7F7 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
MRPL55Q7Z7F7 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC16.35■□□□□ 0.21
MRPL55Q7Z7F7 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
MRPL55Q7Z7F7 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
MRPL55Q7Z7F7 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC16.34■□□□□ 0.21
MRPL55Q7Z7F7 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC16.34■□□□□ 0.21
MRPL55Q7Z7F7 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
MRPL55Q7Z7F7 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
MRPL55Q7Z7F7 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC16.34■□□□□ 0.21
MRPL55Q7Z7F7 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
MRPL55Q7Z7F7 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
MRPL55Q7Z7F7 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
MRPL55Q7Z7F7 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC16.32■□□□□ 0.2
MRPL55Q7Z7F7 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC16.32■□□□□ 0.2
MRPL55Q7Z7F7 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
MRPL55Q7Z7F7 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
MRPL55Q7Z7F7 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
MRPL55Q7Z7F7 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
MRPL55Q7Z7F7 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MRPL55Q7Z7F7 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 37.1 ms