Protein–RNA interactions for Protein: Q7Z7F7

MRPL55, 39S ribosomal protein L55, mitochondrial, humanhuman

Known RBP Predictions only

Length 128 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55Q7Z7F7 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC16.51■□□□□ 0.23
MRPL55Q7Z7F7 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC16.51■□□□□ 0.23
MRPL55Q7Z7F7 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC16.5■□□□□ 0.23
MRPL55Q7Z7F7 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
MRPL55Q7Z7F7 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
MRPL55Q7Z7F7 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
MRPL55Q7Z7F7 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
MRPL55Q7Z7F7 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC16.49■□□□□ 0.23
MRPL55Q7Z7F7 CAHM-201ENST00000604200 896 ntBASIC16.49■□□□□ 0.23
MRPL55Q7Z7F7 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
MRPL55Q7Z7F7 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
MRPL55Q7Z7F7 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
MRPL55Q7Z7F7 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
MRPL55Q7Z7F7 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
MRPL55Q7Z7F7 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
MRPL55Q7Z7F7 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC16.47■□□□□ 0.23
MRPL55Q7Z7F7 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
MRPL55Q7Z7F7 AC142086.6-201ENST00000621154 1765 ntBASIC16.46■□□□□ 0.23
MRPL55Q7Z7F7 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC16.46■□□□□ 0.23
MRPL55Q7Z7F7 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
MRPL55Q7Z7F7 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC16.46■□□□□ 0.23
MRPL55Q7Z7F7 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC16.46■□□□□ 0.23
MRPL55Q7Z7F7 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC16.46■□□□□ 0.22
MRPL55Q7Z7F7 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC16.45■□□□□ 0.22
MRPL55Q7Z7F7 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC16.45■□□□□ 0.22
MRPL55Q7Z7F7 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC16.45■□□□□ 0.22
MRPL55Q7Z7F7 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC16.44■□□□□ 0.22
MRPL55Q7Z7F7 PSMG4-205ENST00000419065 629 ntTSL 2 BASIC16.44■□□□□ 0.22
MRPL55Q7Z7F7 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
MRPL55Q7Z7F7 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC16.43■□□□□ 0.22
MRPL55Q7Z7F7 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC16.43■□□□□ 0.22
MRPL55Q7Z7F7 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC16.43■□□□□ 0.22
MRPL55Q7Z7F7 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
MRPL55Q7Z7F7 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
MRPL55Q7Z7F7 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC16.42■□□□□ 0.22
MRPL55Q7Z7F7 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
MRPL55Q7Z7F7 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC16.41■□□□□ 0.22
MRPL55Q7Z7F7 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
MRPL55Q7Z7F7 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
MRPL55Q7Z7F7 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC16.41■□□□□ 0.22
MRPL55Q7Z7F7 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC16.41■□□□□ 0.22
MRPL55Q7Z7F7 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC16.41■□□□□ 0.22
MRPL55Q7Z7F7 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC16.41■□□□□ 0.22
MRPL55Q7Z7F7 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC16.41■□□□□ 0.22
MRPL55Q7Z7F7 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC16.41■□□□□ 0.22
MRPL55Q7Z7F7 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC16.4■□□□□ 0.22
MRPL55Q7Z7F7 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC16.4■□□□□ 0.22
MRPL55Q7Z7F7 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC16.39■□□□□ 0.21
MRPL55Q7Z7F7 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC16.39■□□□□ 0.21
MRPL55Q7Z7F7 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC16.39■□□□□ 0.21
MRPL55Q7Z7F7 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC16.39■□□□□ 0.21
MRPL55Q7Z7F7 DRD5P2-201ENST00000421395 2012 ntBASIC16.39■□□□□ 0.21
MRPL55Q7Z7F7 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC16.39■□□□□ 0.21
MRPL55Q7Z7F7 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
MRPL55Q7Z7F7 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC16.39■□□□□ 0.21
MRPL55Q7Z7F7 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC16.38■□□□□ 0.21
MRPL55Q7Z7F7 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
MRPL55Q7Z7F7 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC16.38■□□□□ 0.21
MRPL55Q7Z7F7 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC16.38■□□□□ 0.21
MRPL55Q7Z7F7 AP004833.2-201ENST00000532228 1454 ntBASIC16.38■□□□□ 0.21
MRPL55Q7Z7F7 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC16.38■□□□□ 0.21
MRPL55Q7Z7F7 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC16.37■□□□□ 0.21
MRPL55Q7Z7F7 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC16.37■□□□□ 0.21
MRPL55Q7Z7F7 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC16.37■□□□□ 0.21
MRPL55Q7Z7F7 MIR762-201ENST00000390236 83 ntBASIC16.37■□□□□ 0.21
MRPL55Q7Z7F7 RPS2-209ENST00000529806 993 ntTSL 3 BASIC16.37■□□□□ 0.21
MRPL55Q7Z7F7 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC16.37■□□□□ 0.21
MRPL55Q7Z7F7 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC16.37■□□□□ 0.21
MRPL55Q7Z7F7 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC16.36■□□□□ 0.21
MRPL55Q7Z7F7 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
MRPL55Q7Z7F7 REPS2-202ENST00000357277 7953 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
MRPL55Q7Z7F7 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC16.36■□□□□ 0.21
MRPL55Q7Z7F7 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
MRPL55Q7Z7F7 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC16.36■□□□□ 0.21
MRPL55Q7Z7F7 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC16.36■□□□□ 0.21
MRPL55Q7Z7F7 CHML-205ENST00000638160 705 ntTSL 3 BASIC16.36■□□□□ 0.21
MRPL55Q7Z7F7 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.36■□□□□ 0.21
MRPL55Q7Z7F7 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC16.36■□□□□ 0.21
MRPL55Q7Z7F7 AC127502.1-201ENST00000399971 1502 ntBASIC16.35■□□□□ 0.21
MRPL55Q7Z7F7 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC16.35■□□□□ 0.21
MRPL55Q7Z7F7 ARTN-204ENST00000438616 889 ntTSL 1 (best) BASIC16.35■□□□□ 0.21
MRPL55Q7Z7F7 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC16.35■□□□□ 0.21
MRPL55Q7Z7F7 PTPRM-211ENST00000580170 5941 ntAPPRIS ALT2 TSL 1 (best) BASIC16.35■□□□□ 0.21
MRPL55Q7Z7F7 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC16.35■□□□□ 0.21
MRPL55Q7Z7F7 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC16.34■□□□□ 0.21
MRPL55Q7Z7F7 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC16.34■□□□□ 0.21
MRPL55Q7Z7F7 CABLES1-201ENST00000256925 5002 ntAPPRIS P4 TSL 1 (best) BASIC16.34■□□□□ 0.21
MRPL55Q7Z7F7 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC16.34■□□□□ 0.21
MRPL55Q7Z7F7 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC16.34■□□□□ 0.21
MRPL55Q7Z7F7 DVL3-201ENST00000313143 5254 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
MRPL55Q7Z7F7 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.21
MRPL55Q7Z7F7 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
MRPL55Q7Z7F7 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC16.32■□□□□ 0.2
MRPL55Q7Z7F7 AL133346.1-201ENST00000435287 495 ntTSL 2 BASIC16.32■□□□□ 0.2
MRPL55Q7Z7F7 CDH24-206ENST00000610348 2037 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
MRPL55Q7Z7F7 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
MRPL55Q7Z7F7 HRK-201ENST00000257572 5789 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
MRPL55Q7Z7F7 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
MRPL55Q7Z7F7 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
MRPL55Q7Z7F7 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Retrieved 100 of 98,524 protein–RNA pairs in 27.2 ms