Protein–RNA interactions for Protein: Q7Z3D4

LYSMD3, LysM and putative peptidoglycan-binding domain-containing protein 3, humanhuman

Predictions only

Length 306 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD3Q7Z3D4 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC26.09■■□□□ 1.77
LYSMD3Q7Z3D4 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
LYSMD3Q7Z3D4 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC26.08■■□□□ 1.77
LYSMD3Q7Z3D4 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC26.07■■□□□ 1.76
LYSMD3Q7Z3D4 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
LYSMD3Q7Z3D4 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC26.07■■□□□ 1.76
LYSMD3Q7Z3D4 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC26.06■■□□□ 1.76
LYSMD3Q7Z3D4 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC26.06■■□□□ 1.76
LYSMD3Q7Z3D4 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
LYSMD3Q7Z3D4 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC26.06■■□□□ 1.76
LYSMD3Q7Z3D4 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
LYSMD3Q7Z3D4 RCC1L-201ENST00000610322 2300 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
LYSMD3Q7Z3D4 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
LYSMD3Q7Z3D4 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC26.05■■□□□ 1.76
LYSMD3Q7Z3D4 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
LYSMD3Q7Z3D4 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC26.05■■□□□ 1.76
LYSMD3Q7Z3D4 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC26.04■■□□□ 1.76
LYSMD3Q7Z3D4 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
LYSMD3Q7Z3D4 EI24-212ENST00000615917 1407 ntTSL 2 BASIC26.04■■□□□ 1.76
LYSMD3Q7Z3D4 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
LYSMD3Q7Z3D4 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
LYSMD3Q7Z3D4 AC021231.2-201ENST00000594613 730 ntBASIC26.02■■□□□ 1.76
LYSMD3Q7Z3D4 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC26.01■■□□□ 1.75
LYSMD3Q7Z3D4 DUX4L29-201ENST00000425409 679 ntBASIC26.01■■□□□ 1.75
LYSMD3Q7Z3D4 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC26■■□□□ 1.75
LYSMD3Q7Z3D4 MLEC-202ENST00000412616 841 ntTSL 3 BASIC26■■□□□ 1.75
LYSMD3Q7Z3D4 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC26■■□□□ 1.75
LYSMD3Q7Z3D4 ABCB10P3-201ENST00000561950 2166 ntBASIC25.99■■□□□ 1.75
LYSMD3Q7Z3D4 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC25.99■■□□□ 1.75
LYSMD3Q7Z3D4 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC25.99■■□□□ 1.75
LYSMD3Q7Z3D4 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC25.99■■□□□ 1.75
LYSMD3Q7Z3D4 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
LYSMD3Q7Z3D4 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC25.99■■□□□ 1.75
LYSMD3Q7Z3D4 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC25.99■■□□□ 1.75
LYSMD3Q7Z3D4 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
LYSMD3Q7Z3D4 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
LYSMD3Q7Z3D4 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC25.98■■□□□ 1.75
LYSMD3Q7Z3D4 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC25.98■■□□□ 1.75
LYSMD3Q7Z3D4 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
LYSMD3Q7Z3D4 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC25.97■■□□□ 1.75
LYSMD3Q7Z3D4 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC25.97■■□□□ 1.75
LYSMD3Q7Z3D4 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC25.97■■□□□ 1.75
LYSMD3Q7Z3D4 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC25.97■■□□□ 1.75
LYSMD3Q7Z3D4 AC139426.1-201ENST00000568218 2529 ntBASIC25.97■■□□□ 1.75
LYSMD3Q7Z3D4 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
LYSMD3Q7Z3D4 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
LYSMD3Q7Z3D4 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
LYSMD3Q7Z3D4 HGH1-207ENST00000628266 258 ntTSL 5 BASIC25.96■■□□□ 1.75
LYSMD3Q7Z3D4 AL139393.2-201ENST00000608721 2025 ntBASIC25.96■■□□□ 1.75
LYSMD3Q7Z3D4 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC25.96■■□□□ 1.75
LYSMD3Q7Z3D4 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
LYSMD3Q7Z3D4 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC25.95■■□□□ 1.74
LYSMD3Q7Z3D4 ABHD17AP4-201ENST00000411545 909 ntBASIC25.95■■□□□ 1.74
LYSMD3Q7Z3D4 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC25.95■■□□□ 1.74
LYSMD3Q7Z3D4 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
LYSMD3Q7Z3D4 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
LYSMD3Q7Z3D4 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC25.93■■□□□ 1.74
LYSMD3Q7Z3D4 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC25.93■■□□□ 1.74
LYSMD3Q7Z3D4 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC25.93■■□□□ 1.74
LYSMD3Q7Z3D4 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC25.92■■□□□ 1.74
LYSMD3Q7Z3D4 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
LYSMD3Q7Z3D4 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC25.92■■□□□ 1.74
LYSMD3Q7Z3D4 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
LYSMD3Q7Z3D4 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC25.92■■□□□ 1.74
LYSMD3Q7Z3D4 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC25.92■■□□□ 1.74
LYSMD3Q7Z3D4 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
LYSMD3Q7Z3D4 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC25.91■■□□□ 1.74
LYSMD3Q7Z3D4 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
LYSMD3Q7Z3D4 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC25.91■■□□□ 1.74
LYSMD3Q7Z3D4 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC25.9■■□□□ 1.74
LYSMD3Q7Z3D4 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC25.9■■□□□ 1.74
LYSMD3Q7Z3D4 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
LYSMD3Q7Z3D4 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC25.89■■□□□ 1.74
LYSMD3Q7Z3D4 LINC00273-201ENST00000539813 1452 ntBASIC25.89■■□□□ 1.73
LYSMD3Q7Z3D4 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC25.89■■□□□ 1.73
LYSMD3Q7Z3D4 CALM3-209ENST00000597743 577 ntTSL 4 BASIC25.88■■□□□ 1.73
LYSMD3Q7Z3D4 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC25.88■■□□□ 1.73
LYSMD3Q7Z3D4 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC25.87■■□□□ 1.73
LYSMD3Q7Z3D4 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC25.87■■□□□ 1.73
LYSMD3Q7Z3D4 MAPK13-201ENST00000211287 2052 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
LYSMD3Q7Z3D4 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
LYSMD3Q7Z3D4 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
LYSMD3Q7Z3D4 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC25.85■■□□□ 1.73
LYSMD3Q7Z3D4 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC25.85■■□□□ 1.73
LYSMD3Q7Z3D4 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC25.84■■□□□ 1.73
LYSMD3Q7Z3D4 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC25.84■■□□□ 1.73
LYSMD3Q7Z3D4 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC25.84■■□□□ 1.73
LYSMD3Q7Z3D4 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC25.84■■□□□ 1.73
LYSMD3Q7Z3D4 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC25.84■■□□□ 1.73
LYSMD3Q7Z3D4 AC135983.2-203ENST00000454486 1613 ntBASIC25.84■■□□□ 1.73
LYSMD3Q7Z3D4 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC25.84■■□□□ 1.73
LYSMD3Q7Z3D4 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC25.83■■□□□ 1.73
LYSMD3Q7Z3D4 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC25.83■■□□□ 1.73
LYSMD3Q7Z3D4 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC25.83■■□□□ 1.73
LYSMD3Q7Z3D4 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC25.81■■□□□ 1.72
LYSMD3Q7Z3D4 WHAMMP2-203ENST00000563942 1603 ntBASIC25.81■■□□□ 1.72
LYSMD3Q7Z3D4 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC25.81■■□□□ 1.72
LYSMD3Q7Z3D4 AP004833.2-201ENST00000532228 1454 ntBASIC25.81■■□□□ 1.72
LYSMD3Q7Z3D4 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC25.81■■□□□ 1.72
LYSMD3Q7Z3D4 ZNRF2P2-203ENST00000454624 420 ntBASIC25.81■■□□□ 1.72
Retrieved 100 of 98,524 protein–RNA pairs in 9.9 ms