Protein–RNA interactions for Protein: Q7RTZ2

USP17L1, Ubiquitin carboxyl-terminal hydrolase 17-like protein 1, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP17L1Q7RTZ2 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC31.87■■■□□ 2.69
USP17L1Q7RTZ2 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC31.87■■■□□ 2.69
USP17L1Q7RTZ2 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
USP17L1Q7RTZ2 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC31.86■■■□□ 2.69
USP17L1Q7RTZ2 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC31.86■■■□□ 2.69
USP17L1Q7RTZ2 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC31.85■■■□□ 2.69
USP17L1Q7RTZ2 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
USP17L1Q7RTZ2 CHST11-202ENST00000546689 756 ntTSL 2 BASIC31.84■■■□□ 2.69
USP17L1Q7RTZ2 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC31.84■■■□□ 2.69
USP17L1Q7RTZ2 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC31.84■■■□□ 2.69
USP17L1Q7RTZ2 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
USP17L1Q7RTZ2 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC31.83■■■□□ 2.69
USP17L1Q7RTZ2 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC31.82■■■□□ 2.68
USP17L1Q7RTZ2 LINC00273-201ENST00000539813 1452 ntBASIC31.82■■■□□ 2.68
USP17L1Q7RTZ2 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC31.81■■■□□ 2.68
USP17L1Q7RTZ2 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC31.81■■■□□ 2.68
USP17L1Q7RTZ2 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC31.81■■■□□ 2.68
USP17L1Q7RTZ2 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC31.81■■■□□ 2.68
USP17L1Q7RTZ2 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC31.8■■■□□ 2.68
USP17L1Q7RTZ2 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC31.79■■■□□ 2.68
USP17L1Q7RTZ2 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC31.78■■■□□ 2.68
USP17L1Q7RTZ2 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC31.77■■■□□ 2.68
USP17L1Q7RTZ2 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC31.76■■■□□ 2.67
USP17L1Q7RTZ2 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC31.75■■■□□ 2.67
USP17L1Q7RTZ2 AC010864.1-201ENST00000609407 1511 ntBASIC31.75■■■□□ 2.67
USP17L1Q7RTZ2 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
USP17L1Q7RTZ2 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC31.74■■■□□ 2.67
USP17L1Q7RTZ2 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC31.73■■■□□ 2.67
USP17L1Q7RTZ2 RARRES2P2-201ENST00000394842 485 ntBASIC31.73■■■□□ 2.67
USP17L1Q7RTZ2 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC31.73■■■□□ 2.67
USP17L1Q7RTZ2 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
USP17L1Q7RTZ2 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC31.72■■■□□ 2.67
USP17L1Q7RTZ2 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
USP17L1Q7RTZ2 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
USP17L1Q7RTZ2 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC31.7■■■□□ 2.67
USP17L1Q7RTZ2 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC31.7■■■□□ 2.67
USP17L1Q7RTZ2 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC31.7■■■□□ 2.67
USP17L1Q7RTZ2 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC31.7■■■□□ 2.67
USP17L1Q7RTZ2 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC31.7■■■□□ 2.66
USP17L1Q7RTZ2 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
USP17L1Q7RTZ2 GPX1-201ENST00000419349 1106 ntBASIC31.69■■■□□ 2.66
USP17L1Q7RTZ2 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC31.69■■■□□ 2.66
USP17L1Q7RTZ2 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
USP17L1Q7RTZ2 TPT1-202ENST00000379055 948 ntTSL 2 BASIC31.68■■■□□ 2.66
USP17L1Q7RTZ2 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC31.68■■■□□ 2.66
USP17L1Q7RTZ2 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
USP17L1Q7RTZ2 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC31.67■■■□□ 2.66
USP17L1Q7RTZ2 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC31.66■■■□□ 2.66
USP17L1Q7RTZ2 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC31.64■■■□□ 2.66
USP17L1Q7RTZ2 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC31.64■■■□□ 2.65
USP17L1Q7RTZ2 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
USP17L1Q7RTZ2 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
USP17L1Q7RTZ2 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC31.62■■■□□ 2.65
USP17L1Q7RTZ2 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC31.62■■■□□ 2.65
USP17L1Q7RTZ2 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC31.61■■■□□ 2.65
USP17L1Q7RTZ2 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC31.61■■■□□ 2.65
USP17L1Q7RTZ2 ABHD17AP5-201ENST00000580133 923 ntBASIC31.61■■■□□ 2.65
USP17L1Q7RTZ2 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC31.61■■■□□ 2.65
USP17L1Q7RTZ2 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
USP17L1Q7RTZ2 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
USP17L1Q7RTZ2 RNF126P1-201ENST00000567452 1320 ntBASIC31.6■■■□□ 2.65
USP17L1Q7RTZ2 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
USP17L1Q7RTZ2 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC31.59■■■□□ 2.65
USP17L1Q7RTZ2 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC31.58■■■□□ 2.65
USP17L1Q7RTZ2 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
USP17L1Q7RTZ2 CEP120-209ENST00000515110 606 ntTSL 3 BASIC31.56■■■□□ 2.64
USP17L1Q7RTZ2 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC31.56■■■□□ 2.64
USP17L1Q7RTZ2 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC31.55■■■□□ 2.64
USP17L1Q7RTZ2 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC31.54■■■□□ 2.64
USP17L1Q7RTZ2 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC31.53■■■□□ 2.64
USP17L1Q7RTZ2 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
USP17L1Q7RTZ2 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
USP17L1Q7RTZ2 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC31.52■■■□□ 2.64
USP17L1Q7RTZ2 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
USP17L1Q7RTZ2 ZBTB7A-202ENST00000601588 2083 ntAPPRIS P1 TSL 1 (best) BASIC31.52■■■□□ 2.64
USP17L1Q7RTZ2 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC31.51■■■□□ 2.64
USP17L1Q7RTZ2 EMX1-201ENST00000258106 2188 ntAPPRIS P1 TSL 1 (best) BASIC31.51■■■□□ 2.64
USP17L1Q7RTZ2 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC31.51■■■□□ 2.64
USP17L1Q7RTZ2 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
USP17L1Q7RTZ2 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC31.5■■■□□ 2.63
USP17L1Q7RTZ2 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC31.5■■■□□ 2.63
USP17L1Q7RTZ2 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC31.5■■■□□ 2.63
USP17L1Q7RTZ2 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC31.5■■■□□ 2.63
USP17L1Q7RTZ2 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
USP17L1Q7RTZ2 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC31.49■■■□□ 2.63
USP17L1Q7RTZ2 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
USP17L1Q7RTZ2 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC31.49■■■□□ 2.63
USP17L1Q7RTZ2 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC31.49■■■□□ 2.63
USP17L1Q7RTZ2 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC31.49■■■□□ 2.63
USP17L1Q7RTZ2 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
USP17L1Q7RTZ2 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC31.48■■■□□ 2.63
USP17L1Q7RTZ2 AC008105.3-203ENST00000591365 2238 ntTSL 2 BASIC31.48■■■□□ 2.63
USP17L1Q7RTZ2 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC31.48■■■□□ 2.63
USP17L1Q7RTZ2 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC31.48■■■□□ 2.63
USP17L1Q7RTZ2 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC31.48■■■□□ 2.63
USP17L1Q7RTZ2 CERS1-201ENST00000429504 2094 ntTSL 1 (best) BASIC31.47■■■□□ 2.63
USP17L1Q7RTZ2 AC127502.1-201ENST00000399971 1502 ntBASIC31.46■■■□□ 2.63
USP17L1Q7RTZ2 AC008813.1-201ENST00000536597 885 ntBASIC31.46■■■□□ 2.63
USP17L1Q7RTZ2 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC31.46■■■□□ 2.63
USP17L1Q7RTZ2 AC022413.1-201ENST00000624602 984 ntBASIC31.46■■■□□ 2.63
Retrieved 100 of 98,524 protein–RNA pairs in 59.9 ms