Protein–RNA interactions for Protein: Q70EL2

USP45, Ubiquitin carboxyl-terminal hydrolase 45, humanhuman

Predictions only

Length 814 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP45Q70EL2 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
USP45Q70EL2 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
USP45Q70EL2 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC26.09■■□□□ 1.77
USP45Q70EL2 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
USP45Q70EL2 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC26.07■■□□□ 1.76
USP45Q70EL2 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC26.07■■□□□ 1.76
USP45Q70EL2 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC26.06■■□□□ 1.76
USP45Q70EL2 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC26.06■■□□□ 1.76
USP45Q70EL2 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC26.06■■□□□ 1.76
USP45Q70EL2 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
USP45Q70EL2 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC26.06■■□□□ 1.76
USP45Q70EL2 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC26.05■■□□□ 1.76
USP45Q70EL2 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC26.05■■□□□ 1.76
USP45Q70EL2 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC26.04■■□□□ 1.76
USP45Q70EL2 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
USP45Q70EL2 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
USP45Q70EL2 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC26.03■■□□□ 1.76
USP45Q70EL2 ZNRF2P2-203ENST00000454624 420 ntBASIC26.03■■□□□ 1.76
USP45Q70EL2 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC26.03■■□□□ 1.76
USP45Q70EL2 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC26.02■■□□□ 1.76
USP45Q70EL2 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
USP45Q70EL2 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC26.02■■□□□ 1.76
USP45Q70EL2 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC26.01■■□□□ 1.75
USP45Q70EL2 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC26.01■■□□□ 1.75
USP45Q70EL2 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC26.01■■□□□ 1.75
USP45Q70EL2 LINC00273-201ENST00000539813 1452 ntBASIC26.01■■□□□ 1.75
USP45Q70EL2 CALM3-209ENST00000597743 577 ntTSL 4 BASIC26.01■■□□□ 1.75
USP45Q70EL2 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC26■■□□□ 1.75
USP45Q70EL2 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
USP45Q70EL2 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC26■■□□□ 1.75
USP45Q70EL2 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC25.99■■□□□ 1.75
USP45Q70EL2 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.98■■□□□ 1.75
USP45Q70EL2 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC25.98■■□□□ 1.75
USP45Q70EL2 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC25.98■■□□□ 1.75
USP45Q70EL2 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC25.97■■□□□ 1.75
USP45Q70EL2 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC25.97■■□□□ 1.75
USP45Q70EL2 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC25.96■■□□□ 1.75
USP45Q70EL2 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC25.96■■□□□ 1.75
USP45Q70EL2 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
USP45Q70EL2 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC25.96■■□□□ 1.75
USP45Q70EL2 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC25.96■■□□□ 1.75
USP45Q70EL2 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC25.95■■□□□ 1.75
USP45Q70EL2 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC25.95■■□□□ 1.74
USP45Q70EL2 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC25.95■■□□□ 1.74
USP45Q70EL2 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC25.95■■□□□ 1.74
USP45Q70EL2 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC25.95■■□□□ 1.74
USP45Q70EL2 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC25.95■■□□□ 1.74
USP45Q70EL2 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC25.94■■□□□ 1.74
USP45Q70EL2 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC25.94■■□□□ 1.74
USP45Q70EL2 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
USP45Q70EL2 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC25.94■■□□□ 1.74
USP45Q70EL2 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
USP45Q70EL2 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC25.93■■□□□ 1.74
USP45Q70EL2 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC25.93■■□□□ 1.74
USP45Q70EL2 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
USP45Q70EL2 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC25.93■■□□□ 1.74
USP45Q70EL2 LINC01971-201ENST00000617888 1048 ntBASIC25.93■■□□□ 1.74
USP45Q70EL2 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
USP45Q70EL2 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC25.93■■□□□ 1.74
USP45Q70EL2 MIR7108-201ENST00000614319 87 ntBASIC25.92■■□□□ 1.74
USP45Q70EL2 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC25.92■■□□□ 1.74
USP45Q70EL2 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
USP45Q70EL2 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC25.91■■□□□ 1.74
USP45Q70EL2 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC25.91■■□□□ 1.74
USP45Q70EL2 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC25.91■■□□□ 1.74
USP45Q70EL2 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC25.91■■□□□ 1.74
USP45Q70EL2 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC25.9■■□□□ 1.74
USP45Q70EL2 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC25.89■■□□□ 1.73
USP45Q70EL2 AC135983.2-203ENST00000454486 1613 ntBASIC25.88■■□□□ 1.73
USP45Q70EL2 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC25.88■■□□□ 1.73
USP45Q70EL2 AP004833.2-201ENST00000532228 1454 ntBASIC25.87■■□□□ 1.73
USP45Q70EL2 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC25.87■■□□□ 1.73
USP45Q70EL2 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC25.87■■□□□ 1.73
USP45Q70EL2 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC25.86■■□□□ 1.73
USP45Q70EL2 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC25.86■■□□□ 1.73
USP45Q70EL2 AL139393.2-201ENST00000608721 2025 ntBASIC25.86■■□□□ 1.73
USP45Q70EL2 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC25.85■■□□□ 1.73
USP45Q70EL2 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC25.85■■□□□ 1.73
USP45Q70EL2 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
USP45Q70EL2 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC25.85■■□□□ 1.73
USP45Q70EL2 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC25.85■■□□□ 1.73
USP45Q70EL2 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC25.84■■□□□ 1.73
USP45Q70EL2 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC25.84■■□□□ 1.73
USP45Q70EL2 WHAMMP2-203ENST00000563942 1603 ntBASIC25.84■■□□□ 1.73
USP45Q70EL2 DUX4L11-201ENST00000611504 1267 ntBASIC25.83■■□□□ 1.73
USP45Q70EL2 DUX4L12-201ENST00000614593 1267 ntBASIC25.83■■□□□ 1.73
USP45Q70EL2 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC25.83■■□□□ 1.73
USP45Q70EL2 DUX4L14-201ENST00000621227 1267 ntBASIC25.83■■□□□ 1.73
USP45Q70EL2 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC25.83■■□□□ 1.72
USP45Q70EL2 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC25.82■■□□□ 1.72
USP45Q70EL2 LZTS2-201ENST00000370220 5741 ntAPPRIS P1 TSL 1 (best) BASIC25.82■■□□□ 1.72
USP45Q70EL2 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC25.81■■□□□ 1.72
USP45Q70EL2 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
USP45Q70EL2 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC25.8■■□□□ 1.72
USP45Q70EL2 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
USP45Q70EL2 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC25.8■■□□□ 1.72
USP45Q70EL2 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC25.79■■□□□ 1.72
USP45Q70EL2 PVT1-219ENST00000523427 938 ntTSL 3 BASIC25.79■■□□□ 1.72
USP45Q70EL2 RNF166-209ENST00000567844 633 ntTSL 5 BASIC25.79■■□□□ 1.72
USP45Q70EL2 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC25.79■■□□□ 1.72
Retrieved 100 of 98,524 protein–RNA pairs in 67.4 ms