Protein–RNA interactions for Protein: Q6NUI1

CCDC144NL, Putative coiled-coil domain-containing protein 144 N-terminal-like, humanhuman

Predictions only

Length 221 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC144NLQ6NUI1 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC144NLQ6NUI1 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC144NLQ6NUI1 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
CCDC144NLQ6NUI1 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC20.96■□□□□ 0.95
CCDC144NLQ6NUI1 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC20.96■□□□□ 0.95
CCDC144NLQ6NUI1 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC144NLQ6NUI1 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC20.96■□□□□ 0.95
CCDC144NLQ6NUI1 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC144NLQ6NUI1 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC144NLQ6NUI1 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC144NLQ6NUI1 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC20.95■□□□□ 0.94
CCDC144NLQ6NUI1 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC20.94■□□□□ 0.94
CCDC144NLQ6NUI1 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC144NLQ6NUI1 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC20.94■□□□□ 0.94
CCDC144NLQ6NUI1 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC144NLQ6NUI1 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC20.93■□□□□ 0.94
CCDC144NLQ6NUI1 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.93■□□□□ 0.94
CCDC144NLQ6NUI1 AC021231.2-201ENST00000594613 730 ntBASIC20.92■□□□□ 0.94
CCDC144NLQ6NUI1 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC144NLQ6NUI1 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.92■□□□□ 0.94
CCDC144NLQ6NUI1 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC20.92■□□□□ 0.94
CCDC144NLQ6NUI1 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC20.91■□□□□ 0.94
CCDC144NLQ6NUI1 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC144NLQ6NUI1 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC20.91■□□□□ 0.94
CCDC144NLQ6NUI1 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC144NLQ6NUI1 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC144NLQ6NUI1 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC20.91■□□□□ 0.94
CCDC144NLQ6NUI1 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC144NLQ6NUI1 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC20.9■□□□□ 0.94
CCDC144NLQ6NUI1 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC144NLQ6NUI1 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.9■□□□□ 0.94
CCDC144NLQ6NUI1 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC144NLQ6NUI1 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC20.89■□□□□ 0.93
CCDC144NLQ6NUI1 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC20.89■□□□□ 0.93
CCDC144NLQ6NUI1 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC20.89■□□□□ 0.93
CCDC144NLQ6NUI1 AP004833.2-201ENST00000532228 1454 ntBASIC20.88■□□□□ 0.93
CCDC144NLQ6NUI1 LINC00273-201ENST00000539813 1452 ntBASIC20.88■□□□□ 0.93
CCDC144NLQ6NUI1 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC20.88■□□□□ 0.93
CCDC144NLQ6NUI1 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC20.88■□□□□ 0.93
CCDC144NLQ6NUI1 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC144NLQ6NUI1 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC144NLQ6NUI1 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC20.88■□□□□ 0.93
CCDC144NLQ6NUI1 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC20.88■□□□□ 0.93
CCDC144NLQ6NUI1 HGH1-207ENST00000628266 258 ntTSL 5 BASIC20.88■□□□□ 0.93
CCDC144NLQ6NUI1 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC20.88■□□□□ 0.93
CCDC144NLQ6NUI1 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC20.88■□□□□ 0.93
CCDC144NLQ6NUI1 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC20.88■□□□□ 0.93
CCDC144NLQ6NUI1 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC20.87■□□□□ 0.93
CCDC144NLQ6NUI1 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC144NLQ6NUI1 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC144NLQ6NUI1 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC20.87■□□□□ 0.93
CCDC144NLQ6NUI1 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC20.86■□□□□ 0.93
CCDC144NLQ6NUI1 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC144NLQ6NUI1 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC20.86■□□□□ 0.93
CCDC144NLQ6NUI1 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC20.86■□□□□ 0.93
CCDC144NLQ6NUI1 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC20.86■□□□□ 0.93
CCDC144NLQ6NUI1 CALM3-209ENST00000597743 577 ntTSL 4 BASIC20.86■□□□□ 0.93
CCDC144NLQ6NUI1 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.86■□□□□ 0.93
CCDC144NLQ6NUI1 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC20.86■□□□□ 0.93
CCDC144NLQ6NUI1 GNPTAB-201ENST00000299314 5701 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC144NLQ6NUI1 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC144NLQ6NUI1 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC144NLQ6NUI1 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC144NLQ6NUI1 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC144NLQ6NUI1 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC20.85■□□□□ 0.93
CCDC144NLQ6NUI1 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC20.85■□□□□ 0.93
CCDC144NLQ6NUI1 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC144NLQ6NUI1 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC20.85■□□□□ 0.93
CCDC144NLQ6NUI1 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC20.85■□□□□ 0.93
CCDC144NLQ6NUI1 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC144NLQ6NUI1 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC144NLQ6NUI1 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.84■□□□□ 0.93
CCDC144NLQ6NUI1 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC20.84■□□□□ 0.93
CCDC144NLQ6NUI1 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC20.83■□□□□ 0.92
CCDC144NLQ6NUI1 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC20.82■□□□□ 0.92
CCDC144NLQ6NUI1 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC144NLQ6NUI1 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC144NLQ6NUI1 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC20.82■□□□□ 0.92
CCDC144NLQ6NUI1 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
CCDC144NLQ6NUI1 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC20.81■□□□□ 0.92
CCDC144NLQ6NUI1 ABHD17AP4-201ENST00000411545 909 ntBASIC20.81■□□□□ 0.92
CCDC144NLQ6NUI1 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC20.81■□□□□ 0.92
CCDC144NLQ6NUI1 AL139393.2-201ENST00000608721 2025 ntBASIC20.81■□□□□ 0.92
CCDC144NLQ6NUI1 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC144NLQ6NUI1 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC144NLQ6NUI1 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
CCDC144NLQ6NUI1 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC20.78■□□□□ 0.92
CCDC144NLQ6NUI1 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC20.78■□□□□ 0.92
CCDC144NLQ6NUI1 ZNRF2P2-203ENST00000454624 420 ntBASIC20.78■□□□□ 0.92
CCDC144NLQ6NUI1 LINC01971-201ENST00000617888 1048 ntBASIC20.78■□□□□ 0.92
CCDC144NLQ6NUI1 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.92
CCDC144NLQ6NUI1 AC135983.2-203ENST00000454486 1613 ntBASIC20.78■□□□□ 0.92
CCDC144NLQ6NUI1 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC20.78■□□□□ 0.92
CCDC144NLQ6NUI1 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC20.77■□□□□ 0.92
CCDC144NLQ6NUI1 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC144NLQ6NUI1 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC144NLQ6NUI1 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
CCDC144NLQ6NUI1 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
CCDC144NLQ6NUI1 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC20.76■□□□□ 0.91
CCDC144NLQ6NUI1 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC20.76■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 19.3 ms