Protein–RNA interactions for Protein: Q5JQF7

LINC01556, Putative uncharacterized protein encoded by LINC01556, humanhuman

Predictions only

Length 62 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01556Q5JQF7 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LINC01556Q5JQF7 AC021231.2-201ENST00000594613 730 ntBASIC17.65■□□□□ 0.42
LINC01556Q5JQF7 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
LINC01556Q5JQF7 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
LINC01556Q5JQF7 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.42
LINC01556Q5JQF7 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
LINC01556Q5JQF7 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC17.64■□□□□ 0.41
LINC01556Q5JQF7 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LINC01556Q5JQF7 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LINC01556Q5JQF7 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC17.63■□□□□ 0.41
LINC01556Q5JQF7 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC17.63■□□□□ 0.41
LINC01556Q5JQF7 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC17.63■□□□□ 0.41
LINC01556Q5JQF7 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC17.63■□□□□ 0.41
LINC01556Q5JQF7 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LINC01556Q5JQF7 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC17.63■□□□□ 0.41
LINC01556Q5JQF7 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC17.62■□□□□ 0.41
LINC01556Q5JQF7 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC17.62■□□□□ 0.41
LINC01556Q5JQF7 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
LINC01556Q5JQF7 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC17.62■□□□□ 0.41
LINC01556Q5JQF7 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC17.62■□□□□ 0.41
LINC01556Q5JQF7 HGH1-207ENST00000628266 258 ntTSL 5 BASIC17.62■□□□□ 0.41
LINC01556Q5JQF7 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC17.62■□□□□ 0.41
LINC01556Q5JQF7 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC17.61■□□□□ 0.41
LINC01556Q5JQF7 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LINC01556Q5JQF7 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC17.61■□□□□ 0.41
LINC01556Q5JQF7 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC17.61■□□□□ 0.41
LINC01556Q5JQF7 LINC00273-201ENST00000539813 1452 ntBASIC17.61■□□□□ 0.41
LINC01556Q5JQF7 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC17.61■□□□□ 0.41
LINC01556Q5JQF7 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC17.61■□□□□ 0.41
LINC01556Q5JQF7 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LINC01556Q5JQF7 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC17.6■□□□□ 0.41
LINC01556Q5JQF7 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC17.6■□□□□ 0.41
LINC01556Q5JQF7 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.6■□□□□ 0.41
LINC01556Q5JQF7 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC17.6■□□□□ 0.41
LINC01556Q5JQF7 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC17.6■□□□□ 0.41
LINC01556Q5JQF7 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LINC01556Q5JQF7 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LINC01556Q5JQF7 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LINC01556Q5JQF7 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LINC01556Q5JQF7 CALM3-209ENST00000597743 577 ntTSL 4 BASIC17.59■□□□□ 0.41
LINC01556Q5JQF7 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC17.59■□□□□ 0.41
LINC01556Q5JQF7 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC17.59■□□□□ 0.41
LINC01556Q5JQF7 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC17.59■□□□□ 0.41
LINC01556Q5JQF7 AP004833.2-201ENST00000532228 1454 ntBASIC17.58■□□□□ 0.41
LINC01556Q5JQF7 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LINC01556Q5JQF7 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC17.58■□□□□ 0.4
LINC01556Q5JQF7 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC17.58■□□□□ 0.4
LINC01556Q5JQF7 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC17.58■□□□□ 0.4
LINC01556Q5JQF7 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC17.58■□□□□ 0.4
LINC01556Q5JQF7 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC17.58■□□□□ 0.4
LINC01556Q5JQF7 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC17.58■□□□□ 0.4
LINC01556Q5JQF7 ARHGEF7-205ENST00000375739 5375 ntTSL 1 (best) BASIC17.58■□□□□ 0.4
LINC01556Q5JQF7 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC17.57■□□□□ 0.4
LINC01556Q5JQF7 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC17.57■□□□□ 0.4
LINC01556Q5JQF7 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LINC01556Q5JQF7 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.57■□□□□ 0.4
LINC01556Q5JQF7 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC17.57■□□□□ 0.4
LINC01556Q5JQF7 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC17.57■□□□□ 0.4
LINC01556Q5JQF7 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC17.57■□□□□ 0.4
LINC01556Q5JQF7 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC17.57■□□□□ 0.4
LINC01556Q5JQF7 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC17.56■□□□□ 0.4
LINC01556Q5JQF7 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC17.56■□□□□ 0.4
LINC01556Q5JQF7 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
LINC01556Q5JQF7 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC17.56■□□□□ 0.4
LINC01556Q5JQF7 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC17.56■□□□□ 0.4
LINC01556Q5JQF7 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC17.55■□□□□ 0.4
LINC01556Q5JQF7 ABHD17AP4-201ENST00000411545 909 ntBASIC17.55■□□□□ 0.4
LINC01556Q5JQF7 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC17.54■□□□□ 0.4
LINC01556Q5JQF7 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC17.54■□□□□ 0.4
LINC01556Q5JQF7 AL139393.2-201ENST00000608721 2025 ntBASIC17.54■□□□□ 0.4
LINC01556Q5JQF7 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC17.54■□□□□ 0.4
LINC01556Q5JQF7 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC17.54■□□□□ 0.4
LINC01556Q5JQF7 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC17.54■□□□□ 0.4
LINC01556Q5JQF7 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC17.53■□□□□ 0.4
LINC01556Q5JQF7 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC17.53■□□□□ 0.4
LINC01556Q5JQF7 ZNRF2P2-203ENST00000454624 420 ntBASIC17.53■□□□□ 0.4
LINC01556Q5JQF7 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC17.53■□□□□ 0.4
LINC01556Q5JQF7 AC135983.2-203ENST00000454486 1613 ntBASIC17.53■□□□□ 0.4
LINC01556Q5JQF7 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC17.52■□□□□ 0.4
LINC01556Q5JQF7 LINC01971-201ENST00000617888 1048 ntBASIC17.52■□□□□ 0.4
LINC01556Q5JQF7 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC17.52■□□□□ 0.39
LINC01556Q5JQF7 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC17.51■□□□□ 0.39
LINC01556Q5JQF7 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC17.51■□□□□ 0.39
LINC01556Q5JQF7 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LINC01556Q5JQF7 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LINC01556Q5JQF7 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LINC01556Q5JQF7 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC17.5■□□□□ 0.39
LINC01556Q5JQF7 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
LINC01556Q5JQF7 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
LINC01556Q5JQF7 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
LINC01556Q5JQF7 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC17.49■□□□□ 0.39
LINC01556Q5JQF7 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
LINC01556Q5JQF7 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC17.49■□□□□ 0.39
LINC01556Q5JQF7 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
LINC01556Q5JQF7 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
LINC01556Q5JQF7 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
LINC01556Q5JQF7 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC17.48■□□□□ 0.39
LINC01556Q5JQF7 ABCB10P3-201ENST00000561950 2166 ntBASIC17.47■□□□□ 0.39
LINC01556Q5JQF7 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
LINC01556Q5JQF7 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 14.9 ms