Protein–RNA interactions for Protein: Q2KHR2

RFX7, DNA-binding protein RFX7, humanhuman

Predictions only

Length 1,363 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFX7Q2KHR2 RPS2-202ENST00000526522 924 ntTSL 2 BASIC31.77■■■□□ 2.68
RFX7Q2KHR2 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
RFX7Q2KHR2 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
RFX7Q2KHR2 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC31.76■■■□□ 2.67
RFX7Q2KHR2 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC31.75■■■□□ 2.67
RFX7Q2KHR2 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC31.75■■■□□ 2.67
RFX7Q2KHR2 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
RFX7Q2KHR2 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC31.73■■■□□ 2.67
RFX7Q2KHR2 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC31.72■■■□□ 2.67
RFX7Q2KHR2 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
RFX7Q2KHR2 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC31.71■■■□□ 2.67
RFX7Q2KHR2 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC31.7■■■□□ 2.67
RFX7Q2KHR2 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC31.69■■■□□ 2.66
RFX7Q2KHR2 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC31.68■■■□□ 2.66
RFX7Q2KHR2 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC31.68■■■□□ 2.66
RFX7Q2KHR2 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC31.68■■■□□ 2.66
RFX7Q2KHR2 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
RFX7Q2KHR2 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
RFX7Q2KHR2 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC31.67■■■□□ 2.66
RFX7Q2KHR2 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC31.67■■■□□ 2.66
RFX7Q2KHR2 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
RFX7Q2KHR2 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC31.67■■■□□ 2.66
RFX7Q2KHR2 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC31.66■■■□□ 2.66
RFX7Q2KHR2 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC31.66■■■□□ 2.66
RFX7Q2KHR2 RNF166-209ENST00000567844 633 ntTSL 5 BASIC31.66■■■□□ 2.66
RFX7Q2KHR2 LINC01971-201ENST00000617888 1048 ntBASIC31.66■■■□□ 2.66
RFX7Q2KHR2 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC31.65■■■□□ 2.66
RFX7Q2KHR2 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC31.65■■■□□ 2.66
RFX7Q2KHR2 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC31.64■■■□□ 2.66
RFX7Q2KHR2 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC31.63■■■□□ 2.65
RFX7Q2KHR2 CR559946.2-201ENST00000623684 991 ntBASIC31.63■■■□□ 2.65
RFX7Q2KHR2 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC31.62■■■□□ 2.65
RFX7Q2KHR2 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC31.61■■■□□ 2.65
RFX7Q2KHR2 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
RFX7Q2KHR2 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC31.6■■■□□ 2.65
RFX7Q2KHR2 MIR639-201ENST00000384974 98 ntBASIC31.6■■■□□ 2.65
RFX7Q2KHR2 MIR4449-201ENST00000578365 66 ntBASIC31.6■■■□□ 2.65
RFX7Q2KHR2 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC31.59■■■□□ 2.65
RFX7Q2KHR2 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC31.59■■■□□ 2.65
RFX7Q2KHR2 DUX4L11-201ENST00000611504 1267 ntBASIC31.59■■■□□ 2.65
RFX7Q2KHR2 DUX4L12-201ENST00000614593 1267 ntBASIC31.59■■■□□ 2.65
RFX7Q2KHR2 DUX4L14-201ENST00000621227 1267 ntBASIC31.59■■■□□ 2.65
RFX7Q2KHR2 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC31.59■■■□□ 2.65
RFX7Q2KHR2 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC31.59■■■□□ 2.65
RFX7Q2KHR2 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC31.59■■■□□ 2.65
RFX7Q2KHR2 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC31.59■■■□□ 2.65
RFX7Q2KHR2 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC31.58■■■□□ 2.65
RFX7Q2KHR2 MIR3648-2-201ENST00000581792 180 ntBASIC31.58■■■□□ 2.65
RFX7Q2KHR2 MIR3648-1-201ENST00000615959 180 ntBASIC31.58■■■□□ 2.65
RFX7Q2KHR2 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
RFX7Q2KHR2 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
RFX7Q2KHR2 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC31.57■■■□□ 2.64
RFX7Q2KHR2 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC31.56■■■□□ 2.64
RFX7Q2KHR2 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC31.55■■■□□ 2.64
RFX7Q2KHR2 CLEC3B-202ENST00000428034 752 ntTSL 2 BASIC31.55■■■□□ 2.64
RFX7Q2KHR2 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC31.55■■■□□ 2.64
RFX7Q2KHR2 GDI1-215ENST00000630693 786 ntTSL 4 BASIC31.55■■■□□ 2.64
RFX7Q2KHR2 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC31.54■■■□□ 2.64
RFX7Q2KHR2 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC31.54■■■□□ 2.64
RFX7Q2KHR2 AC016575.1-201ENST00000607026 382 ntBASIC31.54■■■□□ 2.64
RFX7Q2KHR2 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC31.54■■■□□ 2.64
RFX7Q2KHR2 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC31.53■■■□□ 2.64
RFX7Q2KHR2 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC31.53■■■□□ 2.64
RFX7Q2KHR2 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC31.53■■■□□ 2.64
RFX7Q2KHR2 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC31.52■■■□□ 2.64
RFX7Q2KHR2 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC31.52■■■□□ 2.64
RFX7Q2KHR2 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC31.52■■■□□ 2.64
RFX7Q2KHR2 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC31.52■■■□□ 2.64
RFX7Q2KHR2 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC31.52■■■□□ 2.64
RFX7Q2KHR2 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC31.5■■■□□ 2.63
RFX7Q2KHR2 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
RFX7Q2KHR2 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC31.49■■■□□ 2.63
RFX7Q2KHR2 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC31.49■■■□□ 2.63
RFX7Q2KHR2 AC127502.1-201ENST00000399971 1502 ntBASIC31.48■■■□□ 2.63
RFX7Q2KHR2 AGPS-202ENST00000409888 815 ntTSL 4 BASIC31.48■■■□□ 2.63
RFX7Q2KHR2 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC31.48■■■□□ 2.63
RFX7Q2KHR2 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC31.48■■■□□ 2.63
RFX7Q2KHR2 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC31.48■■■□□ 2.63
RFX7Q2KHR2 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
RFX7Q2KHR2 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
RFX7Q2KHR2 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC31.47■■■□□ 2.63
RFX7Q2KHR2 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC31.47■■■□□ 2.63
RFX7Q2KHR2 EI24-212ENST00000615917 1407 ntTSL 2 BASIC31.46■■■□□ 2.63
RFX7Q2KHR2 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC31.45■■■□□ 2.63
RFX7Q2KHR2 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC31.45■■■□□ 2.63
RFX7Q2KHR2 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC31.45■■■□□ 2.63
RFX7Q2KHR2 ABCB10P3-201ENST00000561950 2166 ntBASIC31.45■■■□□ 2.63
RFX7Q2KHR2 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC31.45■■■□□ 2.62
RFX7Q2KHR2 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC31.44■■■□□ 2.62
RFX7Q2KHR2 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC31.44■■■□□ 2.62
RFX7Q2KHR2 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
RFX7Q2KHR2 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC31.43■■■□□ 2.62
RFX7Q2KHR2 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC31.43■■■□□ 2.62
RFX7Q2KHR2 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC31.43■■■□□ 2.62
RFX7Q2KHR2 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC31.43■■■□□ 2.62
RFX7Q2KHR2 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC31.42■■■□□ 2.62
RFX7Q2KHR2 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC31.42■■■□□ 2.62
RFX7Q2KHR2 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC31.42■■■□□ 2.62
RFX7Q2KHR2 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC31.41■■■□□ 2.62
RFX7Q2KHR2 AL139393.2-201ENST00000608721 2025 ntBASIC31.4■■■□□ 2.62
Retrieved 100 of 98,524 protein–RNA pairs in 8.6 ms