Protein–RNA interactions for Protein: P50416

CPT1A, Carnitine O-palmitoyltransferase 1, liver isoform, humanhuman

Predictions only

Length 773 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CPT1AP50416 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC29.31■■■□□ 2.28
CPT1AP50416 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC29.31■■■□□ 2.28
CPT1AP50416 CHST11-202ENST00000546689 756 ntTSL 2 BASIC29.3■■■□□ 2.28
CPT1AP50416 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC29.3■■■□□ 2.28
CPT1AP50416 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC29.3■■■□□ 2.28
CPT1AP50416 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC29.3■■■□□ 2.28
CPT1AP50416 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
CPT1AP50416 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC29.29■■■□□ 2.28
CPT1AP50416 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC29.29■■■□□ 2.28
CPT1AP50416 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC29.29■■■□□ 2.28
CPT1AP50416 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
CPT1AP50416 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
CPT1AP50416 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
CPT1AP50416 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC29.28■■■□□ 2.28
CPT1AP50416 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC29.28■■■□□ 2.28
CPT1AP50416 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
CPT1AP50416 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC29.28■■■□□ 2.28
CPT1AP50416 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC29.28■■■□□ 2.28
CPT1AP50416 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC29.28■■■□□ 2.28
CPT1AP50416 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC29.28■■■□□ 2.28
CPT1AP50416 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC29.26■■■□□ 2.28
CPT1AP50416 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC29.25■■■□□ 2.27
CPT1AP50416 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC29.25■■■□□ 2.27
CPT1AP50416 SRP68-213ENST00000629930 165 ntTSL 5 BASIC29.24■■■□□ 2.27
CPT1AP50416 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
CPT1AP50416 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC29.23■■■□□ 2.27
CPT1AP50416 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC29.23■■■□□ 2.27
CPT1AP50416 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC29.23■■■□□ 2.27
CPT1AP50416 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC29.22■■■□□ 2.27
CPT1AP50416 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC29.22■■■□□ 2.27
CPT1AP50416 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC29.2■■■□□ 2.26
CPT1AP50416 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC29.19■■■□□ 2.26
CPT1AP50416 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC29.18■■■□□ 2.26
CPT1AP50416 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC29.18■■■□□ 2.26
CPT1AP50416 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC29.17■■■□□ 2.26
CPT1AP50416 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC29.17■■■□□ 2.26
CPT1AP50416 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC29.17■■■□□ 2.26
CPT1AP50416 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC29.17■■■□□ 2.26
CPT1AP50416 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC29.14■■■□□ 2.26
CPT1AP50416 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC29.13■■■□□ 2.25
CPT1AP50416 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC29.13■■■□□ 2.25
CPT1AP50416 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC29.13■■■□□ 2.25
CPT1AP50416 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
CPT1AP50416 TPT1-202ENST00000379055 948 ntTSL 2 BASIC29.12■■■□□ 2.25
CPT1AP50416 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC29.12■■■□□ 2.25
CPT1AP50416 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC29.11■■■□□ 2.25
CPT1AP50416 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC29.11■■■□□ 2.25
CPT1AP50416 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC29.11■■■□□ 2.25
CPT1AP50416 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC29.1■■■□□ 2.25
CPT1AP50416 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC29.1■■■□□ 2.25
CPT1AP50416 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC29.1■■■□□ 2.25
CPT1AP50416 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC29.09■■■□□ 2.25
CPT1AP50416 RARRES2P2-201ENST00000394842 485 ntBASIC29.09■■■□□ 2.25
CPT1AP50416 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC29.09■■■□□ 2.25
CPT1AP50416 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC29.08■■■□□ 2.25
CPT1AP50416 GPX1-201ENST00000419349 1106 ntBASIC29.08■■■□□ 2.25
CPT1AP50416 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC29.08■■■□□ 2.25
CPT1AP50416 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC29.08■■■□□ 2.25
CPT1AP50416 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC29.08■■■□□ 2.25
CPT1AP50416 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
CPT1AP50416 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC29.07■■■□□ 2.24
CPT1AP50416 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC29.06■■■□□ 2.24
CPT1AP50416 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC29.06■■■□□ 2.24
CPT1AP50416 AC127502.1-201ENST00000399971 1502 ntBASIC29.05■■■□□ 2.24
CPT1AP50416 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC29.05■■■□□ 2.24
CPT1AP50416 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC29.05■■■□□ 2.24
CPT1AP50416 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC29.05■■■□□ 2.24
CPT1AP50416 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC29.05■■■□□ 2.24
CPT1AP50416 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC29.05■■■□□ 2.24
CPT1AP50416 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC29.03■■■□□ 2.24
CPT1AP50416 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC29.03■■■□□ 2.24
CPT1AP50416 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC29.03■■■□□ 2.24
CPT1AP50416 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC29.03■■■□□ 2.24
CPT1AP50416 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC29.03■■■□□ 2.24
CPT1AP50416 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC29.02■■■□□ 2.24
CPT1AP50416 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC29.02■■■□□ 2.24
CPT1AP50416 AC008813.1-201ENST00000536597 885 ntBASIC29.01■■■□□ 2.23
CPT1AP50416 RNF126P1-201ENST00000567452 1320 ntBASIC29■■■□□ 2.23
CPT1AP50416 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC29■■■□□ 2.23
CPT1AP50416 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC29■■■□□ 2.23
CPT1AP50416 CEP120-209ENST00000515110 606 ntTSL 3 BASIC28.99■■■□□ 2.23
CPT1AP50416 ABHD17AP5-201ENST00000580133 923 ntBASIC28.99■■■□□ 2.23
CPT1AP50416 AC135983.2-203ENST00000454486 1613 ntBASIC28.98■■■□□ 2.23
CPT1AP50416 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
CPT1AP50416 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC28.98■■■□□ 2.23
CPT1AP50416 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC28.97■■■□□ 2.23
CPT1AP50416 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC28.97■■■□□ 2.23
CPT1AP50416 WHAMMP2-203ENST00000563942 1603 ntBASIC28.96■■■□□ 2.23
CPT1AP50416 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC28.96■■■□□ 2.23
CPT1AP50416 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC28.95■■■□□ 2.22
CPT1AP50416 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC28.95■■■□□ 2.22
CPT1AP50416 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC28.94■■■□□ 2.22
CPT1AP50416 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC28.94■■■□□ 2.22
CPT1AP50416 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC28.94■■■□□ 2.22
CPT1AP50416 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC28.93■■■□□ 2.22
CPT1AP50416 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC28.93■■■□□ 2.22
CPT1AP50416 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC28.93■■■□□ 2.22
CPT1AP50416 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC28.92■■■□□ 2.22
CPT1AP50416 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC28.92■■■□□ 2.22
CPT1AP50416 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC28.92■■■□□ 2.22
Retrieved 100 of 98,524 protein–RNA pairs in 73.5 ms