Protein–RNA interactions for Protein: P49746

THBS3, Thrombospondin-3, humanhuman

Predictions only

Length 956 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS3P49746 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
THBS3P49746 FAM117A-201ENST00000240364 2365 ntAPPRIS P2 TSL 1 (best) BASIC21.22■□□□□ 0.99
THBS3P49746 TGFBRAP1-202ENST00000393359 5979 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
THBS3P49746 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC21.21■□□□□ 0.99
THBS3P49746 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC21.21■□□□□ 0.99
THBS3P49746 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
THBS3P49746 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
THBS3P49746 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC21.21■□□□□ 0.99
THBS3P49746 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC21.2■□□□□ 0.98
THBS3P49746 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC21.2■□□□□ 0.98
THBS3P49746 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
THBS3P49746 AP006261.1-201ENST00000584783 668 ntBASIC21.2■□□□□ 0.98
THBS3P49746 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC21.2■□□□□ 0.98
THBS3P49746 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
THBS3P49746 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
THBS3P49746 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
THBS3P49746 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC21.19■□□□□ 0.98
THBS3P49746 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC21.18■□□□□ 0.98
THBS3P49746 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC21.18■□□□□ 0.98
THBS3P49746 HNRNPLP2-201ENST00000568980 1570 ntBASIC21.18■□□□□ 0.98
THBS3P49746 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC21.18■□□□□ 0.98
THBS3P49746 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
THBS3P49746 AL162393.1-201ENST00000437852 946 ntBASIC21.17■□□□□ 0.98
THBS3P49746 PLSCR3-209ENST00000574401 2032 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
THBS3P49746 AC142086.6-201ENST00000621154 1765 ntBASIC21.16■□□□□ 0.98
THBS3P49746 TNFSF12-201ENST00000293825 1553 ntAPPRIS P1 TSL 1 (best) BASIC21.16■□□□□ 0.98
THBS3P49746 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC21.16■□□□□ 0.98
THBS3P49746 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC21.15■□□□□ 0.98
THBS3P49746 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC21.14■□□□□ 0.97
THBS3P49746 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC21.13■□□□□ 0.97
THBS3P49746 NRG1-221ENST00000614767 762 ntTSL 5 BASIC21.13■□□□□ 0.97
THBS3P49746 ACTR3B-201ENST00000256001 2216 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
THBS3P49746 AP003068.2-202ENST00000526623 1662 ntTSL 2 BASIC21.12■□□□□ 0.97
THBS3P49746 BMP7-204ENST00000450594 1857 ntTSL 2 BASIC21.12■□□□□ 0.97
THBS3P49746 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC21.12■□□□□ 0.97
THBS3P49746 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
THBS3P49746 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
THBS3P49746 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
THBS3P49746 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC21.11■□□□□ 0.97
THBS3P49746 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC21.11■□□□□ 0.97
THBS3P49746 TSPOAP1-AS1-203ENST00000579527 2042 ntTSL 2 BASIC21.11■□□□□ 0.97
THBS3P49746 TARBP1-201ENST00000040877 5130 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
THBS3P49746 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
THBS3P49746 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC21.1■□□□□ 0.97
THBS3P49746 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC21.1■□□□□ 0.97
THBS3P49746 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
THBS3P49746 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
THBS3P49746 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC21.09■□□□□ 0.97
THBS3P49746 CCNG2-201ENST00000316355 5526 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
THBS3P49746 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC21.08■□□□□ 0.97
THBS3P49746 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.96
THBS3P49746 AP004833.2-201ENST00000532228 1454 ntBASIC21.07■□□□□ 0.96
THBS3P49746 MTCH1-201ENST00000373616 2006 ntTSL 1 (best) BASIC21.07■□□□□ 0.96
THBS3P49746 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC21.07■□□□□ 0.96
THBS3P49746 MIR3665-201ENST00000578708 105 ntBASIC21.07■□□□□ 0.96
THBS3P49746 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC21.07■□□□□ 0.96
THBS3P49746 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC21.06■□□□□ 0.96
THBS3P49746 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
THBS3P49746 GPR75-ASB3-201ENST00000406625 2113 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
THBS3P49746 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC21.06■□□□□ 0.96
THBS3P49746 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC21.06■□□□□ 0.96
THBS3P49746 COMMD7-201ENST00000278980 1900 ntAPPRIS P3 TSL 1 (best) BASIC21.06■□□□□ 0.96
THBS3P49746 SMARCD3-203ENST00000392811 2018 ntTSL 1 (best) BASIC21.05■□□□□ 0.96
THBS3P49746 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
THBS3P49746 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
THBS3P49746 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC21.05■□□□□ 0.96
THBS3P49746 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
THBS3P49746 MIR762-201ENST00000390236 83 ntBASIC21.05■□□□□ 0.96
THBS3P49746 DRD5P2-201ENST00000421395 2012 ntBASIC21.05■□□□□ 0.96
THBS3P49746 PLSCR3-202ENST00000535512 2067 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
THBS3P49746 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC21.04■□□□□ 0.96
THBS3P49746 DSG2-201ENST00000261590 5831 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
THBS3P49746 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC21.04■□□□□ 0.96
THBS3P49746 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC21.04■□□□□ 0.96
THBS3P49746 CHML-205ENST00000638160 705 ntTSL 3 BASIC21.04■□□□□ 0.96
THBS3P49746 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC21.04■□□□□ 0.96
THBS3P49746 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
THBS3P49746 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC21.03■□□□□ 0.96
THBS3P49746 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
THBS3P49746 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC21.03■□□□□ 0.96
THBS3P49746 EMID1-203ENST00000404820 2118 ntTSL 5 BASIC21.03■□□□□ 0.96
THBS3P49746 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC21.03■□□□□ 0.96
THBS3P49746 AC127502.1-201ENST00000399971 1502 ntBASIC21.03■□□□□ 0.96
THBS3P49746 MISP3-202ENST00000587086 1535 ntAPPRIS P2 TSL 1 (best) BASIC21.03■□□□□ 0.96
THBS3P49746 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
THBS3P49746 TMEM64-201ENST00000418210 4663 ntTSL 2 BASIC21.02■□□□□ 0.96
THBS3P49746 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
THBS3P49746 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
THBS3P49746 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC21.01■□□□□ 0.95
THBS3P49746 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC21.01■□□□□ 0.95
THBS3P49746 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
THBS3P49746 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
THBS3P49746 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
THBS3P49746 RPS2-209ENST00000529806 993 ntTSL 3 BASIC21.01■□□□□ 0.95
THBS3P49746 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC21.01■□□□□ 0.95
THBS3P49746 COL13A1-203ENST00000398969 2267 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
THBS3P49746 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
THBS3P49746 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC20.99■□□□□ 0.95
THBS3P49746 RAB40C-201ENST00000248139 2699 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
THBS3P49746 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 69.4 ms