Protein–RNA interactions for Protein: P33552

CKS2, Cyclin-dependent kinases regulatory subunit 2, humanhuman

Predictions only

Length 79 aa.

Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CKS2P33552 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC19.01■□□□□ 0.63
CKS2P33552 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC18.99■□□□□ 0.63
CKS2P33552 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CKS2P33552 GLRX5-201ENST00000331334 1564 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CKS2P33552 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CKS2P33552 KCNQ5-204ENST00000370392 1469 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
CKS2P33552 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
CKS2P33552 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC18.98■□□□□ 0.63
CKS2P33552 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
CKS2P33552 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
CKS2P33552 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC18.97■□□□□ 0.63
CKS2P33552 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC18.97■□□□□ 0.63
CKS2P33552 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
CKS2P33552 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CKS2P33552 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
CKS2P33552 PHLPP1-201ENST00000262719 6390 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
CKS2P33552 LRIG1-202ENST00000383703 5283 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CKS2P33552 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
CKS2P33552 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC18.95■□□□□ 0.62
CKS2P33552 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC18.94■□□□□ 0.62
CKS2P33552 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CKS2P33552 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC18.94■□□□□ 0.62
CKS2P33552 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CKS2P33552 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CKS2P33552 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC18.93■□□□□ 0.62
CKS2P33552 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC18.93■□□□□ 0.62
CKS2P33552 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.92■□□□□ 0.62
CKS2P33552 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC18.92■□□□□ 0.62
CKS2P33552 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC18.92■□□□□ 0.62
CKS2P33552 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC18.92■□□□□ 0.62
CKS2P33552 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC18.91■□□□□ 0.62
CKS2P33552 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC18.91■□□□□ 0.62
CKS2P33552 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC18.9■□□□□ 0.62
CKS2P33552 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC18.9■□□□□ 0.62
CKS2P33552 DEDD-212ENST00000545495 2329 ntAPPRIS P1 TSL 3 BASIC18.89■□□□□ 0.61
CKS2P33552 SLC12A2-201ENST00000262461 6885 ntAPPRIS P3 TSL 1 (best) BASIC18.89■□□□□ 0.61
CKS2P33552 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC18.89■□□□□ 0.61
CKS2P33552 ADGRA2-202ENST00000412232 5651 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CKS2P33552 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC18.89■□□□□ 0.61
CKS2P33552 CADPS-219ENST00000612439 5455 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CKS2P33552 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
CKS2P33552 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
CKS2P33552 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
CKS2P33552 CACNA1H-210ENST00000638323 8048 ntAPPRIS ALT2 TSL 5 BASIC18.88■□□□□ 0.61
CKS2P33552 ATMIN-201ENST00000299575 4884 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
CKS2P33552 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CKS2P33552 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CKS2P33552 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
CKS2P33552 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC18.87■□□□□ 0.61
CKS2P33552 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
CKS2P33552 BX255925.1-201ENST00000566954 1854 ntBASIC18.87■□□□□ 0.61
CKS2P33552 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC18.86■□□□□ 0.61
CKS2P33552 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC18.86■□□□□ 0.61
CKS2P33552 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CKS2P33552 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CKS2P33552 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CKS2P33552 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
CKS2P33552 FOXO1-201ENST00000379561 5735 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CKS2P33552 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CKS2P33552 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CKS2P33552 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
CKS2P33552 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CKS2P33552 MYH7B-209ENST00000618182 6197 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
CKS2P33552 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC18.84■□□□□ 0.61
CKS2P33552 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CKS2P33552 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
CKS2P33552 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CKS2P33552 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
CKS2P33552 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC18.83■□□□□ 0.61
CKS2P33552 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC18.83■□□□□ 0.6
CKS2P33552 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC18.83■□□□□ 0.6
CKS2P33552 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC18.83■□□□□ 0.6
CKS2P33552 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC18.82■□□□□ 0.6
CKS2P33552 ANKRD53-201ENST00000272421 2185 ntAPPRIS P3 TSL 1 (best) BASIC18.82■□□□□ 0.6
CKS2P33552 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
CKS2P33552 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC18.81■□□□□ 0.6
CKS2P33552 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC18.81■□□□□ 0.6
CKS2P33552 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC18.81■□□□□ 0.6
CKS2P33552 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC18.81■□□□□ 0.6
CKS2P33552 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC18.81■□□□□ 0.6
CKS2P33552 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CKS2P33552 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CKS2P33552 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
CKS2P33552 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.8■□□□□ 0.6
CKS2P33552 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.6
CKS2P33552 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.79■□□□□ 0.6
CKS2P33552 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC18.79■□□□□ 0.6
CKS2P33552 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC18.79■□□□□ 0.6
CKS2P33552 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC18.79■□□□□ 0.6
CKS2P33552 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC18.78■□□□□ 0.6
CKS2P33552 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC18.78■□□□□ 0.6
CKS2P33552 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC18.78■□□□□ 0.6
CKS2P33552 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC18.78■□□□□ 0.6
CKS2P33552 SHF-208ENST00000560734 1731 ntTSL 3 BASIC18.77■□□□□ 0.6
CKS2P33552 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC18.77■□□□□ 0.6
CKS2P33552 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC18.77■□□□□ 0.6
CKS2P33552 EBPL-203ENST00000378270 579 ntTSL 2 BASIC18.77■□□□□ 0.6
CKS2P33552 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
CKS2P33552 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC18.77■□□□□ 0.6
CKS2P33552 CDC14B-202ENST00000375241 5589 ntAPPRIS P2 TSL 1 (best) BASIC18.77■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 27.8 ms