Protein–RNA interactions for Protein: P27449

ATP6V0C, V-type proton ATPase 16 kDa proteolipid subunit, humanhuman

Predictions only

Length 155 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP6V0CP27449 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ATP6V0CP27449 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
ATP6V0CP27449 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
ATP6V0CP27449 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
ATP6V0CP27449 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
ATP6V0CP27449 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
ATP6V0CP27449 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
ATP6V0CP27449 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
ATP6V0CP27449 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ATP6V0CP27449 CHMP4B-201ENST00000217402 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ATP6V0CP27449 HOMER2-202ENST00000450735 1950 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
ATP6V0CP27449 CDH23-208ENST00000461841 2000 ntTSL 5 BASIC20.73■□□□□ 0.91
ATP6V0CP27449 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ATP6V0CP27449 FGF19-201ENST00000294312 2447 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
ATP6V0CP27449 AC008738.5-201ENST00000587312 482 ntTSL 3 BASIC20.72■□□□□ 0.91
ATP6V0CP27449 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC20.72■□□□□ 0.91
ATP6V0CP27449 GNAS-211ENST00000371095 1931 ntAPPRIS ALT1 TSL 1 (best) BASIC20.72■□□□□ 0.91
ATP6V0CP27449 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC20.71■□□□□ 0.91
ATP6V0CP27449 AL449106.1-201ENST00000608517 1980 ntBASIC20.71■□□□□ 0.91
ATP6V0CP27449 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ATP6V0CP27449 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC20.7■□□□□ 0.9
ATP6V0CP27449 SYNGR1-202ENST00000318801 1361 ntTSL 1 (best) BASIC20.7■□□□□ 0.9
ATP6V0CP27449 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC20.69■□□□□ 0.9
ATP6V0CP27449 C11orf80-218ENST00000540737 1786 ntAPPRIS ALT2 TSL 2 BASIC20.69■□□□□ 0.9
ATP6V0CP27449 GNAS-207ENST00000354359 1975 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ATP6V0CP27449 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ATP6V0CP27449 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
ATP6V0CP27449 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
ATP6V0CP27449 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ATP6V0CP27449 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC20.68■□□□□ 0.9
ATP6V0CP27449 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ATP6V0CP27449 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC20.68■□□□□ 0.9
ATP6V0CP27449 HDAC3-201ENST00000305264 1959 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ATP6V0CP27449 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC20.67■□□□□ 0.9
ATP6V0CP27449 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ATP6V0CP27449 SHF-208ENST00000560734 1731 ntTSL 3 BASIC20.67■□□□□ 0.9
ATP6V0CP27449 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC20.67■□□□□ 0.9
ATP6V0CP27449 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
ATP6V0CP27449 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ATP6V0CP27449 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
ATP6V0CP27449 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.66■□□□□ 0.9
ATP6V0CP27449 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC20.65■□□□□ 0.9
ATP6V0CP27449 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ATP6V0CP27449 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ATP6V0CP27449 RSG1-201ENST00000375599 1545 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ATP6V0CP27449 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ATP6V0CP27449 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.9
ATP6V0CP27449 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
ATP6V0CP27449 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
ATP6V0CP27449 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ATP6V0CP27449 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC20.64■□□□□ 0.89
ATP6V0CP27449 FBXO45-201ENST00000311630 5899 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ATP6V0CP27449 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
ATP6V0CP27449 XKR6-201ENST00000297303 1550 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ATP6V0CP27449 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ATP6V0CP27449 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
ATP6V0CP27449 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ATP6V0CP27449 PKM-204ENST00000449901 2526 ntTSL 2 BASIC20.63■□□□□ 0.89
ATP6V0CP27449 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ATP6V0CP27449 GLRB-203ENST00000509282 1757 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ATP6V0CP27449 SH3GL1-202ENST00000417295 1404 ntTSL 2 BASIC20.62■□□□□ 0.89
ATP6V0CP27449 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC20.62■□□□□ 0.89
ATP6V0CP27449 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ATP6V0CP27449 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ATP6V0CP27449 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC20.62■□□□□ 0.89
ATP6V0CP27449 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC20.61■□□□□ 0.89
ATP6V0CP27449 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ATP6V0CP27449 PCYT2-206ENST00000571105 1628 ntTSL 5 BASIC20.6■□□□□ 0.89
ATP6V0CP27449 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
ATP6V0CP27449 CYBA-201ENST00000261623 797 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
ATP6V0CP27449 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC20.6■□□□□ 0.89
ATP6V0CP27449 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC20.59■□□□□ 0.89
ATP6V0CP27449 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC20.59■□□□□ 0.89
ATP6V0CP27449 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ATP6V0CP27449 PROC-203ENST00000409048 1586 ntTSL 5 BASIC20.59■□□□□ 0.89
ATP6V0CP27449 NPTXR-202ENST00000640136 1503 ntAPPRIS P2 TSL 1 (best) BASIC20.58■□□□□ 0.89
ATP6V0CP27449 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC20.58■□□□□ 0.89
ATP6V0CP27449 PKM-203ENST00000389093 2279 ntTSL 5 BASIC20.58■□□□□ 0.88
ATP6V0CP27449 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ATP6V0CP27449 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC20.57■□□□□ 0.88
ATP6V0CP27449 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC20.57■□□□□ 0.88
ATP6V0CP27449 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
ATP6V0CP27449 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC20.57■□□□□ 0.88
ATP6V0CP27449 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC20.57■□□□□ 0.88
ATP6V0CP27449 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC20.56■□□□□ 0.88
ATP6V0CP27449 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC20.56■□□□□ 0.88
ATP6V0CP27449 ANKS1B-202ENST00000333732 1675 ntTSL 2 BASIC20.56■□□□□ 0.88
ATP6V0CP27449 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC20.56■□□□□ 0.88
ATP6V0CP27449 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ATP6V0CP27449 FGF2-203ENST00000614010 867 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ATP6V0CP27449 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ATP6V0CP27449 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC20.55■□□□□ 0.88
ATP6V0CP27449 NRGN-201ENST00000284292 1306 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ATP6V0CP27449 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC20.54■□□□□ 0.88
ATP6V0CP27449 AC079848.1-201ENST00000511301 327 ntTSL 3 BASIC20.54■□□□□ 0.88
ATP6V0CP27449 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ATP6V0CP27449 CGREF1-204ENST00000402550 1575 ntTSL 2 BASIC20.53■□□□□ 0.88
ATP6V0CP27449 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ATP6V0CP27449 MAP3K3-210ENST00000584573 2480 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
ATP6V0CP27449 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC20.52■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 115.5 ms