Protein–RNA interactions for Protein: P23634

ATP2B4, Plasma membrane calcium-transporting ATPase 4, humanhuman

Predictions only

Length 1,241 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2B4P23634 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC32.11■■■□□ 2.73
ATP2B4P23634 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC32.11■■■□□ 2.73
ATP2B4P23634 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
ATP2B4P23634 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC32.1■■■□□ 2.73
ATP2B4P23634 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC32.1■■■□□ 2.73
ATP2B4P23634 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC32.09■■■□□ 2.73
ATP2B4P23634 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC32.09■■■□□ 2.73
ATP2B4P23634 CHST11-202ENST00000546689 756 ntTSL 2 BASIC32.08■■■□□ 2.73
ATP2B4P23634 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC32.08■■■□□ 2.73
ATP2B4P23634 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC32.08■■■□□ 2.73
ATP2B4P23634 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC32.08■■■□□ 2.73
ATP2B4P23634 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC32.06■■■□□ 2.72
ATP2B4P23634 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC32.04■■■□□ 2.72
ATP2B4P23634 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC32.04■■■□□ 2.72
ATP2B4P23634 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC32.04■■■□□ 2.72
ATP2B4P23634 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC32.04■■■□□ 2.72
ATP2B4P23634 PTPRF-216ENST00000617451 1129 ntTSL 5 BASIC32.04■■■□□ 2.72
ATP2B4P23634 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC32.04■■■□□ 2.72
ATP2B4P23634 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC32.04■■■□□ 2.72
ATP2B4P23634 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC32.04■■■□□ 2.72
ATP2B4P23634 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC32.04■■■□□ 2.72
ATP2B4P23634 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC32.04■■■□□ 2.72
ATP2B4P23634 ELK4-201ENST00000289703 2118 ntTSL 1 (best) BASIC32.02■■■□□ 2.72
ATP2B4P23634 SRP68-213ENST00000629930 165 ntTSL 5 BASIC32.02■■■□□ 2.72
ATP2B4P23634 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC32.02■■■□□ 2.72
ATP2B4P23634 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC32.02■■■□□ 2.72
ATP2B4P23634 HMX1-201ENST00000400677 1895 ntAPPRIS P1 TSL 1 (best) BASIC32.01■■■□□ 2.72
ATP2B4P23634 AC016595.1-201ENST00000559410 383 ntTSL 3 BASIC32.01■■■□□ 2.71
ATP2B4P23634 UBALD1-203ENST00000587649 707 ntTSL 3 BASIC32.01■■■□□ 2.71
ATP2B4P23634 MBOAT7-203ENST00000391754 1797 ntTSL 1 (best) BASIC32■■■□□ 2.71
ATP2B4P23634 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC32■■■□□ 2.71
ATP2B4P23634 RBPMS-209ENST00000520161 842 ntTSL 2 BASIC32■■■□□ 2.71
ATP2B4P23634 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC32■■■□□ 2.71
ATP2B4P23634 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC32■■■□□ 2.71
ATP2B4P23634 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC31.99■■■□□ 2.71
ATP2B4P23634 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC31.98■■■□□ 2.71
ATP2B4P23634 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC31.98■■■□□ 2.71
ATP2B4P23634 FTCD-203ENST00000397746 1878 ntAPPRIS P1 TSL 1 (best) BASIC31.97■■■□□ 2.71
ATP2B4P23634 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC31.96■■■□□ 2.71
ATP2B4P23634 NME2-205ENST00000512737 826 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.71
ATP2B4P23634 PANK2-207ENST00000610179 1807 ntAPPRIS ALT2 TSL 1 (best) BASIC31.95■■■□□ 2.7
ATP2B4P23634 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC31.95■■■□□ 2.7
ATP2B4P23634 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC31.94■■■□□ 2.7
ATP2B4P23634 LMNTD2-201ENST00000329451 2084 ntAPPRIS P1 TSL 1 (best) BASIC31.93■■■□□ 2.7
ATP2B4P23634 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC31.93■■■□□ 2.7
ATP2B4P23634 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC31.91■■■□□ 2.7
ATP2B4P23634 PGM5-201ENST00000396392 1782 ntTSL 1 (best) BASIC31.91■■■□□ 2.7
ATP2B4P23634 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC31.91■■■□□ 2.7
ATP2B4P23634 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC31.9■■■□□ 2.7
ATP2B4P23634 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC31.88■■■□□ 2.69
ATP2B4P23634 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC31.88■■■□□ 2.69
ATP2B4P23634 AC127502.1-201ENST00000399971 1502 ntBASIC31.87■■■□□ 2.69
ATP2B4P23634 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC31.87■■■□□ 2.69
ATP2B4P23634 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
ATP2B4P23634 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC31.87■■■□□ 2.69
ATP2B4P23634 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC31.87■■■□□ 2.69
ATP2B4P23634 RAB26-201ENST00000210187 1675 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
ATP2B4P23634 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC31.86■■■□□ 2.69
ATP2B4P23634 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC31.86■■■□□ 2.69
ATP2B4P23634 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC31.86■■■□□ 2.69
ATP2B4P23634 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC31.85■■■□□ 2.69
ATP2B4P23634 TPT1-202ENST00000379055 948 ntTSL 2 BASIC31.85■■■□□ 2.69
ATP2B4P23634 AC007383.2-202ENST00000435627 482 ntTSL 2 BASIC31.85■■■□□ 2.69
ATP2B4P23634 AC068134.2-201ENST00000437095 576 ntTSL 3 BASIC31.85■■■□□ 2.69
ATP2B4P23634 AC092647.5-201ENST00000426595 1732 ntAPPRIS P1 TSL 5 BASIC31.84■■■□□ 2.69
ATP2B4P23634 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
ATP2B4P23634 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC31.84■■■□□ 2.69
ATP2B4P23634 AC018755.3-201ENST00000598755 664 ntTSL 2 BASIC31.83■■■□□ 2.69
ATP2B4P23634 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC31.83■■■□□ 2.69
ATP2B4P23634 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC31.82■■■□□ 2.68
ATP2B4P23634 RARRES2P2-201ENST00000394842 485 ntBASIC31.82■■■□□ 2.68
ATP2B4P23634 GPX1-201ENST00000419349 1106 ntBASIC31.82■■■□□ 2.68
ATP2B4P23634 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC31.82■■■□□ 2.68
ATP2B4P23634 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC31.81■■■□□ 2.68
ATP2B4P23634 AC135983.2-203ENST00000454486 1613 ntBASIC31.8■■■□□ 2.68
ATP2B4P23634 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC31.79■■■□□ 2.68
ATP2B4P23634 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC31.79■■■□□ 2.68
ATP2B4P23634 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC31.78■■■□□ 2.68
ATP2B4P23634 WHAMMP2-203ENST00000563942 1603 ntBASIC31.78■■■□□ 2.68
ATP2B4P23634 COL13A1-212ENST00000520133 1833 ntTSL 5 BASIC31.77■■■□□ 2.68
ATP2B4P23634 AL135925.1-201ENST00000605920 1701 ntBASIC31.76■■■□□ 2.67
ATP2B4P23634 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC31.76■■■□□ 2.67
ATP2B4P23634 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC31.76■■■□□ 2.67
ATP2B4P23634 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC31.76■■■□□ 2.67
ATP2B4P23634 AC008813.1-201ENST00000536597 885 ntBASIC31.75■■■□□ 2.67
ATP2B4P23634 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC31.75■■■□□ 2.67
ATP2B4P23634 FADS3-201ENST00000278829 1779 ntAPPRIS P1 TSL 1 (best) BASIC31.74■■■□□ 2.67
ATP2B4P23634 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC31.74■■■□□ 2.67
ATP2B4P23634 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC31.73■■■□□ 2.67
ATP2B4P23634 CHPT1-205ENST00000549872 2001 ntAPPRIS ALT2 TSL 5 BASIC31.73■■■□□ 2.67
ATP2B4P23634 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC31.73■■■□□ 2.67
ATP2B4P23634 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC31.73■■■□□ 2.67
ATP2B4P23634 RNF126P1-201ENST00000567452 1320 ntBASIC31.73■■■□□ 2.67
ATP2B4P23634 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC31.72■■■□□ 2.67
ATP2B4P23634 CEP120-209ENST00000515110 606 ntTSL 3 BASIC31.72■■■□□ 2.67
ATP2B4P23634 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC31.72■■■□□ 2.67
ATP2B4P23634 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC31.71■■■□□ 2.67
ATP2B4P23634 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC31.71■■■□□ 2.67
ATP2B4P23634 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC31.7■■■□□ 2.67
ATP2B4P23634 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC31.7■■■□□ 2.67
Retrieved 100 of 98,524 protein–RNA pairs in 8.7 ms