Protein–RNA interactions for Protein: P09630

HOXC6, Homeobox protein Hox-C6, humanhuman

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6P09630 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC29.88■■■□□ 2.37
HOXC6P09630 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC29.88■■■□□ 2.37
HOXC6P09630 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
HOXC6P09630 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
HOXC6P09630 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC29.87■■■□□ 2.37
HOXC6P09630 CHST11-202ENST00000546689 756 ntTSL 2 BASIC29.86■■■□□ 2.37
HOXC6P09630 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC29.85■■■□□ 2.37
HOXC6P09630 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC29.85■■■□□ 2.37
HOXC6P09630 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC29.84■■■□□ 2.37
HOXC6P09630 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC29.84■■■□□ 2.37
HOXC6P09630 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC29.84■■■□□ 2.37
HOXC6P09630 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC29.84■■■□□ 2.37
HOXC6P09630 PKIG-207ENST00000372894 1191 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
HOXC6P09630 ADRA1D-201ENST00000379453 2728 ntAPPRIS P1 TSL 1 (best) BASIC29.83■■■□□ 2.37
HOXC6P09630 ZBTB25-202ENST00000555220 1440 ntTSL 1 (best) BASIC29.82■■■□□ 2.36
HOXC6P09630 GPX1-201ENST00000419349 1106 ntBASIC29.82■■■□□ 2.36
HOXC6P09630 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC29.82■■■□□ 2.36
HOXC6P09630 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC29.81■■■□□ 2.36
HOXC6P09630 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC29.81■■■□□ 2.36
HOXC6P09630 PTPMT1-203ENST00000426530 1014 ntTSL 1 (best) BASIC29.81■■■□□ 2.36
HOXC6P09630 ABHD17AP5-201ENST00000580133 923 ntBASIC29.81■■■□□ 2.36
HOXC6P09630 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC29.8■■■□□ 2.36
HOXC6P09630 RNF126P1-201ENST00000567452 1320 ntBASIC29.79■■■□□ 2.36
HOXC6P09630 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC29.79■■■□□ 2.36
HOXC6P09630 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC29.79■■■□□ 2.36
HOXC6P09630 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC29.78■■■□□ 2.36
HOXC6P09630 PDXP-201ENST00000215904 2010 ntAPPRIS P1 TSL 1 (best) BASIC29.78■■■□□ 2.36
HOXC6P09630 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
HOXC6P09630 AL161658.1-201ENST00000623641 1967 ntBASIC29.77■■■□□ 2.36
HOXC6P09630 TPT1-202ENST00000379055 948 ntTSL 2 BASIC29.77■■■□□ 2.36
HOXC6P09630 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC29.77■■■□□ 2.36
HOXC6P09630 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC29.77■■■□□ 2.36
HOXC6P09630 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.36
HOXC6P09630 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC29.76■■■□□ 2.35
HOXC6P09630 GRASP-201ENST00000293662 1933 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.35
HOXC6P09630 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC29.75■■■□□ 2.35
HOXC6P09630 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC29.75■■■□□ 2.35
HOXC6P09630 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC29.74■■■□□ 2.35
HOXC6P09630 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC29.74■■■□□ 2.35
HOXC6P09630 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
HOXC6P09630 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC29.72■■■□□ 2.35
HOXC6P09630 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC29.72■■■□□ 2.35
HOXC6P09630 AC010864.1-201ENST00000609407 1511 ntBASIC29.72■■■□□ 2.35
HOXC6P09630 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC29.72■■■□□ 2.35
HOXC6P09630 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC29.72■■■□□ 2.35
HOXC6P09630 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
HOXC6P09630 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC29.71■■■□□ 2.35
HOXC6P09630 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
HOXC6P09630 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC29.71■■■□□ 2.35
HOXC6P09630 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC29.71■■■□□ 2.35
HOXC6P09630 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.34
HOXC6P09630 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC29.7■■■□□ 2.34
HOXC6P09630 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC29.69■■■□□ 2.34
HOXC6P09630 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC29.69■■■□□ 2.34
HOXC6P09630 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC29.68■■■□□ 2.34
HOXC6P09630 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC29.67■■■□□ 2.34
HOXC6P09630 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC29.67■■■□□ 2.34
HOXC6P09630 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC29.66■■■□□ 2.34
HOXC6P09630 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC29.65■■■□□ 2.34
HOXC6P09630 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC29.65■■■□□ 2.34
HOXC6P09630 EMID1-201ENST00000334018 2173 ntAPPRIS P1 TSL 1 (best) BASIC29.64■■■□□ 2.34
HOXC6P09630 CEP120-209ENST00000515110 606 ntTSL 3 BASIC29.64■■■□□ 2.34
HOXC6P09630 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC29.63■■■□□ 2.33
HOXC6P09630 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC29.63■■■□□ 2.33
HOXC6P09630 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC29.63■■■□□ 2.33
HOXC6P09630 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC29.62■■■□□ 2.33
HOXC6P09630 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC29.62■■■□□ 2.33
HOXC6P09630 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC29.62■■■□□ 2.33
HOXC6P09630 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC29.62■■■□□ 2.33
HOXC6P09630 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC29.62■■■□□ 2.33
HOXC6P09630 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC29.61■■■□□ 2.33
HOXC6P09630 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC29.61■■■□□ 2.33
HOXC6P09630 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC29.59■■■□□ 2.33
HOXC6P09630 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC29.59■■■□□ 2.33
HOXC6P09630 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC29.59■■■□□ 2.33
HOXC6P09630 AC008813.1-201ENST00000536597 885 ntBASIC29.59■■■□□ 2.33
HOXC6P09630 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC29.59■■■□□ 2.33
HOXC6P09630 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC29.59■■■□□ 2.33
HOXC6P09630 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC29.59■■■□□ 2.33
HOXC6P09630 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC29.58■■■□□ 2.33
HOXC6P09630 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC29.58■■■□□ 2.33
HOXC6P09630 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC29.58■■■□□ 2.33
HOXC6P09630 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC29.57■■■□□ 2.32
HOXC6P09630 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC29.57■■■□□ 2.32
HOXC6P09630 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC29.56■■■□□ 2.32
HOXC6P09630 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC29.56■■■□□ 2.32
HOXC6P09630 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC29.56■■■□□ 2.32
HOXC6P09630 AC022413.1-201ENST00000624602 984 ntBASIC29.56■■■□□ 2.32
HOXC6P09630 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC29.56■■■□□ 2.32
HOXC6P09630 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC29.54■■■□□ 2.32
HOXC6P09630 HES4-202ENST00000428771 1040 ntTSL 2 BASIC29.53■■■□□ 2.32
HOXC6P09630 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC29.52■■■□□ 2.32
HOXC6P09630 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
HOXC6P09630 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC29.51■■■□□ 2.31
HOXC6P09630 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC29.51■■■□□ 2.31
HOXC6P09630 NTF6A-201ENST00000591175 560 ntBASIC29.51■■■□□ 2.31
HOXC6P09630 MAPK12-201ENST00000215659 1918 ntAPPRIS P1 TSL 1 (best) BASIC29.51■■■□□ 2.31
HOXC6P09630 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
HOXC6P09630 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC29.5■■■□□ 2.31
HOXC6P09630 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC29.5■■■□□ 2.31
Retrieved 100 of 98,524 protein–RNA pairs in 13 ms