Protein–RNA interactions for Protein: P05538

HLA-DQB2, HLA class II histocompatibility antigen, DQ beta 2 chain, humanhuman

Predictions only

Length 268 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2P05538 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC26.49■■□□□ 1.83
HLA-DQB2P05538 AL139393.2-201ENST00000608721 2025 ntBASIC26.48■■□□□ 1.83
HLA-DQB2P05538 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC26.48■■□□□ 1.83
HLA-DQB2P05538 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC26.47■■□□□ 1.83
HLA-DQB2P05538 ACTG1-210ENST00000575842 2256 ntAPPRIS P1 TSL 1 (best) BASIC26.47■■□□□ 1.83
HLA-DQB2P05538 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC26.46■■□□□ 1.83
HLA-DQB2P05538 AC044849.2-201ENST00000606596 710 ntBASIC26.46■■□□□ 1.83
HLA-DQB2P05538 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC26.46■■□□□ 1.83
HLA-DQB2P05538 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC26.46■■□□□ 1.83
HLA-DQB2P05538 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC26.44■■□□□ 1.82
HLA-DQB2P05538 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC26.44■■□□□ 1.82
HLA-DQB2P05538 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC26.44■■□□□ 1.82
HLA-DQB2P05538 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC26.43■■□□□ 1.82
HLA-DQB2P05538 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
HLA-DQB2P05538 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
HLA-DQB2P05538 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC26.43■■□□□ 1.82
HLA-DQB2P05538 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC26.42■■□□□ 1.82
HLA-DQB2P05538 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC26.42■■□□□ 1.82
HLA-DQB2P05538 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC26.42■■□□□ 1.82
HLA-DQB2P05538 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
HLA-DQB2P05538 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC26.41■■□□□ 1.82
HLA-DQB2P05538 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC26.41■■□□□ 1.82
HLA-DQB2P05538 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC26.41■■□□□ 1.82
HLA-DQB2P05538 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC26.4■■□□□ 1.82
HLA-DQB2P05538 ARHGAP22-202ENST00000374170 2107 ntTSL 5 BASIC26.4■■□□□ 1.82
HLA-DQB2P05538 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC26.4■■□□□ 1.82
HLA-DQB2P05538 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC26.39■■□□□ 1.82
HLA-DQB2P05538 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC26.39■■□□□ 1.82
HLA-DQB2P05538 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC26.39■■□□□ 1.82
HLA-DQB2P05538 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC26.39■■□□□ 1.82
HLA-DQB2P05538 GGA1-204ENST00000381756 2107 ntTSL 1 (best) BASIC26.39■■□□□ 1.81
HLA-DQB2P05538 SLC30A10-202ENST00000366926 1915 ntAPPRIS P1 TSL 1 (best) BASIC26.39■■□□□ 1.81
HLA-DQB2P05538 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC26.39■■□□□ 1.81
HLA-DQB2P05538 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC26.38■■□□□ 1.81
HLA-DQB2P05538 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC26.38■■□□□ 1.81
HLA-DQB2P05538 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC26.37■■□□□ 1.81
HLA-DQB2P05538 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC26.36■■□□□ 1.81
HLA-DQB2P05538 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC26.36■■□□□ 1.81
HLA-DQB2P05538 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC26.35■■□□□ 1.81
HLA-DQB2P05538 CIB2-204ENST00000557846 934 ntTSL 3 BASIC26.34■■□□□ 1.81
HLA-DQB2P05538 SHF-206ENST00000560471 2499 ntTSL 5 BASIC26.34■■□□□ 1.81
HLA-DQB2P05538 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC26.33■■□□□ 1.81
HLA-DQB2P05538 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC26.33■■□□□ 1.81
HLA-DQB2P05538 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC26.32■■□□□ 1.8
HLA-DQB2P05538 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC26.32■■□□□ 1.8
HLA-DQB2P05538 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC26.32■■□□□ 1.8
HLA-DQB2P05538 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC26.32■■□□□ 1.8
HLA-DQB2P05538 BOD1-206ENST00000480951 814 ntTSL 2 BASIC26.32■■□□□ 1.8
HLA-DQB2P05538 EI24-212ENST00000615917 1407 ntTSL 2 BASIC26.31■■□□□ 1.8
HLA-DQB2P05538 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC26.3■■□□□ 1.8
HLA-DQB2P05538 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC26.3■■□□□ 1.8
HLA-DQB2P05538 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC26.29■■□□□ 1.8
HLA-DQB2P05538 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC26.28■■□□□ 1.8
HLA-DQB2P05538 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC26.28■■□□□ 1.8
HLA-DQB2P05538 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
HLA-DQB2P05538 DPF1-202ENST00000412732 2303 ntTSL 1 (best) BASIC26.28■■□□□ 1.8
HLA-DQB2P05538 AP004833.2-201ENST00000532228 1454 ntBASIC26.26■■□□□ 1.79
HLA-DQB2P05538 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC26.26■■□□□ 1.79
HLA-DQB2P05538 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
HLA-DQB2P05538 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC26.24■■□□□ 1.79
HLA-DQB2P05538 DNPEP-201ENST00000273075 2425 ntAPPRIS P3 TSL 1 (best) BASIC26.24■■□□□ 1.79
HLA-DQB2P05538 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
HLA-DQB2P05538 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC26.24■■□□□ 1.79
HLA-DQB2P05538 ADAP1-201ENST00000265846 2363 ntAPPRIS P1 TSL 1 (best) BASIC26.24■■□□□ 1.79
HLA-DQB2P05538 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
HLA-DQB2P05538 PHF20L1-207ENST00000395379 1998 ntTSL 5 BASIC26.23■■□□□ 1.79
HLA-DQB2P05538 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
HLA-DQB2P05538 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC26.23■■□□□ 1.79
HLA-DQB2P05538 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC26.22■■□□□ 1.79
HLA-DQB2P05538 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC26.22■■□□□ 1.79
HLA-DQB2P05538 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC26.22■■□□□ 1.79
HLA-DQB2P05538 THAP11-201ENST00000303596 2114 ntAPPRIS P1 BASIC26.21■■□□□ 1.79
HLA-DQB2P05538 AC021231.2-201ENST00000594613 730 ntBASIC26.21■■□□□ 1.79
HLA-DQB2P05538 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
HLA-DQB2P05538 MPP6-203ENST00000409761 1703 ntTSL 5 BASIC26.21■■□□□ 1.79
HLA-DQB2P05538 LINC00273-201ENST00000539813 1452 ntBASIC26.21■■□□□ 1.79
HLA-DQB2P05538 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC26.2■■□□□ 1.79
HLA-DQB2P05538 CLK2-201ENST00000355560 2120 ntAPPRIS ALT1 TSL 5 BASIC26.2■■□□□ 1.79
HLA-DQB2P05538 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC26.2■■□□□ 1.79
HLA-DQB2P05538 NPHP3-202ENST00000383282 782 ntTSL 1 (best) BASIC26.2■■□□□ 1.78
HLA-DQB2P05538 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
HLA-DQB2P05538 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.78
HLA-DQB2P05538 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC26.2■■□□□ 1.78
HLA-DQB2P05538 AC135983.2-203ENST00000454486 1613 ntBASIC26.19■■□□□ 1.78
HLA-DQB2P05538 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
HLA-DQB2P05538 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
HLA-DQB2P05538 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
HLA-DQB2P05538 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC26.18■■□□□ 1.78
HLA-DQB2P05538 COL13A1-213ENST00000520267 2276 ntAPPRIS ALT2 TSL 5 BASIC26.18■■□□□ 1.78
HLA-DQB2P05538 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC26.17■■□□□ 1.78
HLA-DQB2P05538 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC26.17■■□□□ 1.78
HLA-DQB2P05538 DUX4L29-201ENST00000425409 679 ntBASIC26.17■■□□□ 1.78
HLA-DQB2P05538 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC26.17■■□□□ 1.78
HLA-DQB2P05538 WHAMMP2-203ENST00000563942 1603 ntBASIC26.17■■□□□ 1.78
HLA-DQB2P05538 FZD2-201ENST00000315323 2112 ntAPPRIS P1 BASIC26.17■■□□□ 1.78
HLA-DQB2P05538 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC26.16■■□□□ 1.78
HLA-DQB2P05538 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
HLA-DQB2P05538 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC26.16■■□□□ 1.78
HLA-DQB2P05538 IL17D-201ENST00000304920 1861 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
HLA-DQB2P05538 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC26.15■■□□□ 1.78
Retrieved 100 of 98,524 protein–RNA pairs in 82.9 ms