Protein–RNA interactions for Protein: P05067

APP, Amyloid-beta A4 protein, humanhuman

Predictions only

Length 770 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APPP05067 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC31.13■■■□□ 2.57
APPP05067 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC31.13■■■□□ 2.57
APPP05067 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC31.12■■■□□ 2.57
APPP05067 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC31.11■■■□□ 2.57
APPP05067 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC31.11■■■□□ 2.57
APPP05067 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC31.1■■■□□ 2.57
APPP05067 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
APPP05067 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
APPP05067 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC31.09■■■□□ 2.57
APPP05067 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC31.08■■■□□ 2.57
APPP05067 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC31.08■■■□□ 2.57
APPP05067 MIR7108-201ENST00000614319 87 ntBASIC31.08■■■□□ 2.57
APPP05067 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC31.08■■■□□ 2.57
APPP05067 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC31.07■■■□□ 2.56
APPP05067 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC31.07■■■□□ 2.56
APPP05067 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC31.07■■■□□ 2.56
APPP05067 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC31.06■■■□□ 2.56
APPP05067 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC31.06■■■□□ 2.56
APPP05067 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC31.06■■■□□ 2.56
APPP05067 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC31.05■■■□□ 2.56
APPP05067 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC31.05■■■□□ 2.56
APPP05067 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC31.05■■■□□ 2.56
APPP05067 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC31.05■■■□□ 2.56
APPP05067 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC31.04■■■□□ 2.56
APPP05067 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC31.02■■■□□ 2.56
APPP05067 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC31.01■■■□□ 2.56
APPP05067 PDCD2-209ENST00000542896 1082 ntTSL 2 BASIC31.01■■■□□ 2.55
APPP05067 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC31.01■■■□□ 2.55
APPP05067 CALM3-209ENST00000597743 577 ntTSL 4 BASIC31.01■■■□□ 2.55
APPP05067 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC31■■■□□ 2.55
APPP05067 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC31■■■□□ 2.55
APPP05067 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC31■■■□□ 2.55
APPP05067 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC30.99■■■□□ 2.55
APPP05067 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC30.99■■■□□ 2.55
APPP05067 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC30.99■■■□□ 2.55
APPP05067 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC30.99■■■□□ 2.55
APPP05067 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC30.99■■■□□ 2.55
APPP05067 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC30.98■■■□□ 2.55
APPP05067 PVT1-219ENST00000523427 938 ntTSL 3 BASIC30.98■■■□□ 2.55
APPP05067 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC30.98■■■□□ 2.55
APPP05067 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC30.98■■■□□ 2.55
APPP05067 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC30.98■■■□□ 2.55
APPP05067 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC30.97■■■□□ 2.55
APPP05067 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC30.97■■■□□ 2.55
APPP05067 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC30.97■■■□□ 2.55
APPP05067 LINC00273-201ENST00000539813 1452 ntBASIC30.96■■■□□ 2.55
APPP05067 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC30.96■■■□□ 2.55
APPP05067 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC30.96■■■□□ 2.55
APPP05067 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC30.95■■■□□ 2.55
APPP05067 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC30.95■■■□□ 2.55
APPP05067 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC30.95■■■□□ 2.55
APPP05067 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC30.95■■■□□ 2.54
APPP05067 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC30.94■■■□□ 2.54
APPP05067 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC30.94■■■□□ 2.54
APPP05067 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC30.93■■■□□ 2.54
APPP05067 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC30.93■■■□□ 2.54
APPP05067 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC30.92■■■□□ 2.54
APPP05067 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
APPP05067 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC30.92■■■□□ 2.54
APPP05067 LINC01971-201ENST00000617888 1048 ntBASIC30.92■■■□□ 2.54
APPP05067 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC30.92■■■□□ 2.54
APPP05067 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC30.92■■■□□ 2.54
APPP05067 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC30.91■■■□□ 2.54
APPP05067 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC30.91■■■□□ 2.54
APPP05067 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC30.91■■■□□ 2.54
APPP05067 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC30.91■■■□□ 2.54
APPP05067 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC30.89■■■□□ 2.53
APPP05067 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC30.89■■■□□ 2.53
APPP05067 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC30.88■■■□□ 2.53
APPP05067 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC30.87■■■□□ 2.53
APPP05067 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
APPP05067 DUX4L11-201ENST00000611504 1267 ntBASIC30.86■■■□□ 2.53
APPP05067 DUX4L12-201ENST00000614593 1267 ntBASIC30.86■■■□□ 2.53
APPP05067 DUX4L14-201ENST00000621227 1267 ntBASIC30.86■■■□□ 2.53
APPP05067 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC30.86■■■□□ 2.53
APPP05067 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC30.86■■■□□ 2.53
APPP05067 AC187653.1-201ENST00000506382 702 ntAPPRIS P1 TSL 5 BASIC30.85■■■□□ 2.53
APPP05067 PAPD7-201ENST00000230859 5459 ntTSL 1 (best) BASIC30.85■■■□□ 2.53
APPP05067 AC135983.2-203ENST00000454486 1613 ntBASIC30.84■■■□□ 2.53
APPP05067 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC30.84■■■□□ 2.53
APPP05067 WHAMMP2-203ENST00000563942 1603 ntBASIC30.84■■■□□ 2.53
APPP05067 RNF166-209ENST00000567844 633 ntTSL 5 BASIC30.83■■■□□ 2.53
APPP05067 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC30.83■■■□□ 2.53
APPP05067 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC30.82■■■□□ 2.53
APPP05067 AL139393.2-201ENST00000608721 2025 ntBASIC30.82■■■□□ 2.52
APPP05067 C5orf66-AS1-201ENST00000507035 843 ntTSL 2 BASIC30.82■■■□□ 2.52
APPP05067 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC30.82■■■□□ 2.52
APPP05067 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC30.81■■■□□ 2.52
APPP05067 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC30.8■■■□□ 2.52
APPP05067 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC30.79■■■□□ 2.52
APPP05067 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
APPP05067 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC30.78■■■□□ 2.52
APPP05067 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC30.78■■■□□ 2.52
APPP05067 PIP4K2B-204ENST00000619039 5734 ntAPPRIS P1 TSL 1 (best) BASIC30.78■■■□□ 2.52
APPP05067 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC30.78■■■□□ 2.52
APPP05067 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC30.77■■■□□ 2.52
APPP05067 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC30.77■■■□□ 2.52
APPP05067 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC30.77■■■□□ 2.52
APPP05067 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC30.77■■■□□ 2.52
APPP05067 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC30.77■■■□□ 2.52
Retrieved 100 of 98,524 protein–RNA pairs in 31.2 ms