Protein–RNA interactions for Protein: P03979

TRGV3, T cell receptor gamma variable 3 (Fragment), humanhuman

Predictions only

Length 118 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRGV3P03979 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC20.32■□□□□ 0.84
TRGV3P03979 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRGV3P03979 DPY19L1-209ENST00000638088 5075 ntAPPRIS ALT2 TSL 5 BASIC20.32■□□□□ 0.84
TRGV3P03979 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC20.32■□□□□ 0.84
TRGV3P03979 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
TRGV3P03979 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC20.31■□□□□ 0.84
TRGV3P03979 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRGV3P03979 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
TRGV3P03979 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRGV3P03979 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRGV3P03979 AC127502.1-201ENST00000399971 1502 ntBASIC20.3■□□□□ 0.84
TRGV3P03979 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.3■□□□□ 0.84
TRGV3P03979 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRGV3P03979 EI24-212ENST00000615917 1407 ntTSL 2 BASIC20.29■□□□□ 0.84
TRGV3P03979 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC20.29■□□□□ 0.84
TRGV3P03979 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC20.28■□□□□ 0.84
TRGV3P03979 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRGV3P03979 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC20.28■□□□□ 0.84
TRGV3P03979 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRGV3P03979 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC20.28■□□□□ 0.84
TRGV3P03979 DUX4L29-201ENST00000425409 679 ntBASIC20.27■□□□□ 0.84
TRGV3P03979 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC20.27■□□□□ 0.84
TRGV3P03979 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
TRGV3P03979 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRGV3P03979 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRGV3P03979 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TRGV3P03979 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
TRGV3P03979 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC20.25■□□□□ 0.83
TRGV3P03979 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRGV3P03979 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
TRGV3P03979 ZFAND2B-206ENST00000409336 944 ntAPPRIS P1 TSL 5 BASIC20.24■□□□□ 0.83
TRGV3P03979 ZFAND2B-221ENST00000621130 1070 ntTSL 5 BASIC20.24■□□□□ 0.83
TRGV3P03979 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRGV3P03979 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TRGV3P03979 PABPC1L2B-AS1-201ENST00000416989 1167 ntTSL 3 BASIC20.23■□□□□ 0.83
TRGV3P03979 AC004540.2-201ENST00000451368 611 ntTSL 2 BASIC20.23■□□□□ 0.83
TRGV3P03979 AL662864.1-201ENST00000454388 1167 ntTSL 3 BASIC20.23■□□□□ 0.83
TRGV3P03979 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
TRGV3P03979 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRGV3P03979 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRGV3P03979 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRGV3P03979 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
TRGV3P03979 AC021231.2-201ENST00000594613 730 ntBASIC20.22■□□□□ 0.83
TRGV3P03979 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC20.22■□□□□ 0.83
TRGV3P03979 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC20.22■□□□□ 0.83
TRGV3P03979 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
TRGV3P03979 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRGV3P03979 MLEC-202ENST00000412616 841 ntTSL 3 BASIC20.21■□□□□ 0.83
TRGV3P03979 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
TRGV3P03979 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRGV3P03979 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
TRGV3P03979 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
TRGV3P03979 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC20.2■□□□□ 0.82
TRGV3P03979 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRGV3P03979 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRGV3P03979 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TRGV3P03979 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRGV3P03979 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
TRGV3P03979 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
TRGV3P03979 ABCB10P3-201ENST00000561950 2166 ntBASIC20.19■□□□□ 0.82
TRGV3P03979 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TRGV3P03979 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC20.19■□□□□ 0.82
TRGV3P03979 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC20.19■□□□□ 0.82
TRGV3P03979 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC20.19■□□□□ 0.82
TRGV3P03979 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
TRGV3P03979 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRGV3P03979 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
TRGV3P03979 TRAM2-AS1-201ENST00000453216 664 ntTSL 3 BASIC20.18■□□□□ 0.82
TRGV3P03979 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
TRGV3P03979 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
TRGV3P03979 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
TRGV3P03979 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRGV3P03979 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC20.17■□□□□ 0.82
TRGV3P03979 HGH1-207ENST00000628266 258 ntTSL 5 BASIC20.17■□□□□ 0.82
TRGV3P03979 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC20.17■□□□□ 0.82
TRGV3P03979 AL139393.2-201ENST00000608721 2025 ntBASIC20.17■□□□□ 0.82
TRGV3P03979 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC20.16■□□□□ 0.82
TRGV3P03979 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC20.16■□□□□ 0.82
TRGV3P03979 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC20.16■□□□□ 0.82
TRGV3P03979 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC20.15■□□□□ 0.82
TRGV3P03979 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
TRGV3P03979 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC20.15■□□□□ 0.82
TRGV3P03979 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC20.15■□□□□ 0.82
TRGV3P03979 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRGV3P03979 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRGV3P03979 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRGV3P03979 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
TRGV3P03979 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC20.13■□□□□ 0.81
TRGV3P03979 AC139426.1-201ENST00000568218 2529 ntBASIC20.13■□□□□ 0.81
TRGV3P03979 LINC00273-201ENST00000539813 1452 ntBASIC20.13■□□□□ 0.81
TRGV3P03979 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC20.13■□□□□ 0.81
TRGV3P03979 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC20.13■□□□□ 0.81
TRGV3P03979 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
TRGV3P03979 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
TRGV3P03979 CALM3-209ENST00000597743 577 ntTSL 4 BASIC20.12■□□□□ 0.81
TRGV3P03979 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC20.11■□□□□ 0.81
TRGV3P03979 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
TRGV3P03979 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC20.11■□□□□ 0.81
TRGV3P03979 AP004833.2-201ENST00000532228 1454 ntBASIC20.11■□□□□ 0.81
TRGV3P03979 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC20.1■□□□□ 0.81
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