Protein–RNA interactions for Protein: O75643

SNRNP200, U5 small nuclear ribonucleoprotein 200 kDa helicase, humanhuman

Known RBP Predictions only

Length 2,136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200O75643 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC25.06■■□□□ 1.6
SNRNP200O75643 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
SNRNP200O75643 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC25.06■■□□□ 1.6
SNRNP200O75643 AC021231.2-201ENST00000594613 730 ntBASIC25.06■■□□□ 1.6
SNRNP200O75643 EI24-212ENST00000615917 1407 ntTSL 2 BASIC25.05■■□□□ 1.6
SNRNP200O75643 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC25.05■■□□□ 1.6
SNRNP200O75643 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC25.05■■□□□ 1.6
SNRNP200O75643 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC25.04■■□□□ 1.6
SNRNP200O75643 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
SNRNP200O75643 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC25.04■■□□□ 1.6
SNRNP200O75643 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC25.04■■□□□ 1.6
SNRNP200O75643 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
SNRNP200O75643 HS3ST6-201ENST00000454677 1273 ntAPPRIS P1 TSL 1 (best) BASIC25.04■■□□□ 1.6
SNRNP200O75643 AMN-201ENST00000299155 1907 ntAPPRIS P2 TSL 1 (best) BASIC25.04■■□□□ 1.6
SNRNP200O75643 PQLC1-202ENST00000357575 2475 ntAPPRIS ALT1 TSL 5 BASIC25.03■■□□□ 1.6
SNRNP200O75643 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC25.03■■□□□ 1.6
SNRNP200O75643 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC25.02■■□□□ 1.6
SNRNP200O75643 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC25.01■■□□□ 1.59
SNRNP200O75643 MIR7108-201ENST00000614319 87 ntBASIC25.01■■□□□ 1.59
SNRNP200O75643 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC25.01■■□□□ 1.59
SNRNP200O75643 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC25.01■■□□□ 1.59
SNRNP200O75643 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
SNRNP200O75643 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC25■■□□□ 1.59
SNRNP200O75643 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC25■■□□□ 1.59
SNRNP200O75643 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC25■■□□□ 1.59
SNRNP200O75643 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC25■■□□□ 1.59
SNRNP200O75643 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
SNRNP200O75643 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC24.99■■□□□ 1.59
SNRNP200O75643 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC24.98■■□□□ 1.59
SNRNP200O75643 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC24.98■■□□□ 1.59
SNRNP200O75643 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
SNRNP200O75643 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC24.97■■□□□ 1.59
SNRNP200O75643 ACOT12-204ENST00000513751 612 ntTSL 1 (best) BASIC24.97■■□□□ 1.59
SNRNP200O75643 RRAGC-201ENST00000373001 2732 ntAPPRIS P1 TSL 1 (best) BASIC24.97■■□□□ 1.59
SNRNP200O75643 AC135983.2-203ENST00000454486 1613 ntBASIC24.97■■□□□ 1.59
SNRNP200O75643 HLA-V-202ENST00000446817 847 ntBASIC24.96■■□□□ 1.59
SNRNP200O75643 MTMR1-214ENST00000542156 1227 ntTSL 1 (best) BASIC24.96■■□□□ 1.59
SNRNP200O75643 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC24.96■■□□□ 1.59
SNRNP200O75643 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.59
SNRNP200O75643 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC24.95■■□□□ 1.58
SNRNP200O75643 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC24.95■■□□□ 1.58
SNRNP200O75643 CCDC88C-205ENST00000553403 1651 ntTSL 1 (best) BASIC24.95■■□□□ 1.58
SNRNP200O75643 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC24.94■■□□□ 1.58
SNRNP200O75643 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC24.93■■□□□ 1.58
SNRNP200O75643 AC127502.1-201ENST00000399971 1502 ntBASIC24.93■■□□□ 1.58
SNRNP200O75643 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC24.93■■□□□ 1.58
SNRNP200O75643 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC24.93■■□□□ 1.58
SNRNP200O75643 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC24.93■■□□□ 1.58
SNRNP200O75643 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC24.92■■□□□ 1.58
SNRNP200O75643 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC24.92■■□□□ 1.58
SNRNP200O75643 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC24.92■■□□□ 1.58
SNRNP200O75643 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC24.91■■□□□ 1.58
SNRNP200O75643 WHAMMP2-203ENST00000563942 1603 ntBASIC24.91■■□□□ 1.58
SNRNP200O75643 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC24.91■■□□□ 1.58
SNRNP200O75643 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC24.91■■□□□ 1.58
SNRNP200O75643 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC24.91■■□□□ 1.58
SNRNP200O75643 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC24.91■■□□□ 1.58
SNRNP200O75643 PHOX2A-201ENST00000298231 1699 ntAPPRIS P1 TSL 1 (best) BASIC24.9■■□□□ 1.58
SNRNP200O75643 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC24.9■■□□□ 1.58
SNRNP200O75643 AC013394.1-201ENST00000629685 808 ntAPPRIS P1 TSL 5 BASIC24.89■■□□□ 1.58
SNRNP200O75643 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC24.89■■□□□ 1.58
SNRNP200O75643 PVT1-219ENST00000523427 938 ntTSL 3 BASIC24.89■■□□□ 1.57
SNRNP200O75643 RPS2-202ENST00000526522 924 ntTSL 2 BASIC24.89■■□□□ 1.57
SNRNP200O75643 CR559946.2-201ENST00000623684 991 ntBASIC24.89■■□□□ 1.57
SNRNP200O75643 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC24.87■■□□□ 1.57
SNRNP200O75643 AC139426.1-201ENST00000568218 2529 ntBASIC24.87■■□□□ 1.57
SNRNP200O75643 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC24.87■■□□□ 1.57
SNRNP200O75643 ZNRF2P2-203ENST00000454624 420 ntBASIC24.87■■□□□ 1.57
SNRNP200O75643 CALM3-209ENST00000597743 577 ntTSL 4 BASIC24.86■■□□□ 1.57
SNRNP200O75643 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC24.86■■□□□ 1.57
SNRNP200O75643 PDPK1-203ENST00000389224 2416 ntTSL 2 BASIC24.86■■□□□ 1.57
SNRNP200O75643 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
SNRNP200O75643 RTN2-201ENST00000245923 2293 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
SNRNP200O75643 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC24.85■■□□□ 1.57
SNRNP200O75643 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC24.85■■□□□ 1.57
SNRNP200O75643 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
SNRNP200O75643 KCTD17-202ENST00000403888 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC24.84■■□□□ 1.57
SNRNP200O75643 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
SNRNP200O75643 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
SNRNP200O75643 TRIM52-AS1-203ENST00000509252 529 ntTSL 3 BASIC24.83■■□□□ 1.57
SNRNP200O75643 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC24.83■■□□□ 1.57
SNRNP200O75643 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC24.83■■□□□ 1.57
SNRNP200O75643 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC24.83■■□□□ 1.57
SNRNP200O75643 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
SNRNP200O75643 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC24.82■■□□□ 1.56
SNRNP200O75643 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC24.82■■□□□ 1.56
SNRNP200O75643 LINC01971-201ENST00000617888 1048 ntBASIC24.82■■□□□ 1.56
SNRNP200O75643 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC24.82■■□□□ 1.56
SNRNP200O75643 MATK-201ENST00000310132 2133 ntAPPRIS ALT2 TSL 1 (best) BASIC24.82■■□□□ 1.56
SNRNP200O75643 ABCB10P3-201ENST00000561950 2166 ntBASIC24.82■■□□□ 1.56
SNRNP200O75643 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
SNRNP200O75643 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC24.81■■□□□ 1.56
SNRNP200O75643 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
SNRNP200O75643 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
SNRNP200O75643 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC24.81■■□□□ 1.56
SNRNP200O75643 AGPS-202ENST00000409888 815 ntTSL 4 BASIC24.81■■□□□ 1.56
SNRNP200O75643 GDI1-215ENST00000630693 786 ntTSL 4 BASIC24.81■■□□□ 1.56
SNRNP200O75643 FHL2-202ENST00000344213 1769 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
SNRNP200O75643 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC24.81■■□□□ 1.56
SNRNP200O75643 HOXD13-201ENST00000392539 2240 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
Retrieved 100 of 98,524 protein–RNA pairs in 35.5 ms