Protein–RNA interactions for Protein: O15371

EIF3D, Eukaryotic translation initiation factor 3 subunit D, humanhuman

Known RBP eCLIP

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3DO15371 PEPD-212ENST00000593163 1045 ntTSL 219.58■□□□□ 0.721e-7■■■□□ 16.9
EIF3DO15371 PEPD-202ENST00000397032 1754 ntTSL 2 BASIC17.75■□□□□ 0.431e-7■■■□□ 16.9
EIF3DO15371 PEPD-201ENST00000244137 1910 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.331e-7■■■□□ 16.9
EIF3DO15371 PEPD-204ENST00000588328 581 ntTSL 314.74□□□□□ -0.051e-7■■■□□ 16.9
EIF3DO15371 PEPD-213ENST00000609145 570 ntTSL 211.98□□□□□ -0.491e-7■■■□□ 16.9
EIF3DO15371 PEPD-205ENST00000588719 484 ntTSL 310.05□□□□□ -0.81e-7■■■□□ 16.9
EIF3DO15371 PEPD-208ENST00000590731 557 ntTSL 48.13□□□□□ -1.111e-7■■■□□ 16.9
EIF3DO15371 MALRD1-201ENST00000377265 1761 ntTSL 27.34□□□□□ -1.237e-7■■■□□ 16.9
EIF3DO15371 MAD1L1-210ENST00000444373 535 ntTSL 417.15■□□□□ 0.342e-6■■■□□ 16.9
EIF3DO15371 MDN1-202ENST00000439638 3654 ntTSL 514.54□□□□□ -0.081e-6■■■□□ 16.8
EIF3DO15371 DST-221ENST00000520144 582 ntTSL 36.95□□□□□ -1.35e-9■■■□□ 16.7
EIF3DO15371 ARFGEF2-201ENST00000371917 8852 ntAPPRIS P1 TSL 1 (best) BASIC6.05□□□□□ -1.445e-9■■■□□ 16.7
EIF3DO15371 BIRC6-211ENST00000496555 582 ntTSL 22.22□□□□□ -2.055e-9■■■□□ 16.7
EIF3DO15371 ASMTL-AS1-204ENST00000443929 574 ntTSL 217.73■□□□□ 0.431e-6■■■□□ 16.7
EIF3DO15371 SDC1-205ENST00000447124 591 ntTSL 422.34■■□□□ 1.174e-8■■■□□ 16.7
EIF3DO15371 KMT2B-201ENST00000420124 8469 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.92e-6■■■□□ 16.7
EIF3DO15371 PRC1-209ENST00000556129 583 ntTSL 320.66■□□□□ 0.91e-8■■■□□ 16.7
EIF3DO15371 PRC1-207ENST00000555745 582 ntTSL 320.46■□□□□ 0.871e-8■■■□□ 16.7
EIF3DO15371 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC20.12■□□□□ 0.811e-8■■■□□ 16.7
EIF3DO15371 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC19.88■□□□□ 0.774e-8■■■□□ 16.7
EIF3DO15371 PRC1-213ENST00000557905 571 ntTSL 418.68■□□□□ 0.581e-8■■■□□ 16.7
EIF3DO15371 PRC1-215ENST00000559811 414 ntTSL 317.17■□□□□ 0.341e-8■■■□□ 16.7
EIF3DO15371 PRC1-212ENST00000557763 933 ntTSL 517.08■□□□□ 0.321e-8■■■□□ 16.7
EIF3DO15371 RXRA-201ENST00000356384 5770 ntTSL 516.61■□□□□ 0.252e-6■■■□□ 16.7
EIF3DO15371 PRC1-205ENST00000553494 717 ntTSL 316.22■□□□□ 0.191e-8■■■□□ 16.7
EIF3DO15371 PRC1-203ENST00000417173 1215 ntTSL 216.12■□□□□ 0.171e-8■■■□□ 16.7
EIF3DO15371 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC15.9■□□□□ 0.141e-8■■■□□ 16.7
EIF3DO15371 SDC1-201ENST00000254351 3147 ntAPPRIS P1 TSL 1 (best) BASIC15.1■□□□□ 0.014e-8■■■□□ 16.7
EIF3DO15371 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.051e-8■■■□□ 16.7
EIF3DO15371 PRC1-218ENST00000560605 576 ntTSL 414.71□□□□□ -0.051e-8■■■□□ 16.7
EIF3DO15371 SDC1-202ENST00000381150 3291 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.064e-8■■■□□ 16.7
EIF3DO15371 PRC1-208ENST00000555791 660 ntTSL 414.22□□□□□ -0.131e-8■■■□□ 16.7
EIF3DO15371 PRC1-201ENST00000361188 4087 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.451e-8■■■□□ 16.7
EIF3DO15371 PRC1-202ENST00000394249 3034 ntTSL 1 (best) BASIC11.72□□□□□ -0.531e-8■■■□□ 16.7
EIF3DO15371 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC5.14□□□□□ -1.595e-16■■■□□ 16.7
EIF3DO15371 PKD1-213ENST00000480227 2353 ntTSL 1 (best)18.7■□□□□ 0.581e-6■■■□□ 16.7
EIF3DO15371 PKD1-225ENST00000562297 2040 ntTSL 518.28■□□□□ 0.521e-6■■■□□ 16.7
EIF3DO15371 PKD1-234ENST00000567946 1822 ntTSL 518.01■□□□□ 0.471e-6■■■□□ 16.7
EIF3DO15371 MLLT10-207ENST00000430455 184 ntTSL 1 (best)15.61■□□□□ 0.092e-12■■■□□ 16.6
EIF3DO15371 MLLT10-213ENST00000479634 165 ntTSL 1 (best)13.91□□□□□ -0.182e-12■■■□□ 16.6
EIF3DO15371 MLLT10-209ENST00000462999 344 ntTSL 1 (best)13.91□□□□□ -0.182e-12■■■□□ 16.6
EIF3DO15371 MLLT10-214ENST00000480415 297 ntTSL 1 (best)13.91□□□□□ -0.182e-12■■■□□ 16.6
EIF3DO15371 MLLT10-212ENST00000476557 490 ntTSL 1 (best)6.76□□□□□ -1.332e-12■■■□□ 16.6
EIF3DO15371 FRAS1-202ENST00000502446 2217 ntTSL 513.95□□□□□ -0.181e-6■■■□□ 16.6
EIF3DO15371 PIAS4-201ENST00000262971 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.381e-6■■■□□ 16.6
EIF3DO15371 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.384e-6■■■□□ 16.5
EIF3DO15371 UBR5-212ENST00000521922 9008 ntAPPRIS ALT1 TSL 5 BASIC15.88■□□□□ 0.134e-6■■■□□ 16.5
EIF3DO15371 UBR5-201ENST00000220959 9418 ntAPPRIS ALT1 TSL 1 (best) BASIC15.66■□□□□ 0.14e-6■■■□□ 16.5
EIF3DO15371 EIF4G1-229ENST00000457456 983 ntTSL 29.72□□□□□ -0.851e-16■■■□□ 16.5
EIF3DO15371 TBC1D22A-202ENST00000355704 1886 ntTSL 1 (best) BASIC24.92■■□□□ 1.583e-6■■■□□ 16.4
EIF3DO15371 TBC1D22A-206ENST00000407381 1949 ntTSL 5 BASIC23.95■■□□□ 1.423e-6■■■□□ 16.4
EIF3DO15371 TBC1D22A-204ENST00000394449 2048 ntTSL 523.46■■□□□ 1.353e-6■■■□□ 16.4
EIF3DO15371 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC17.21■□□□□ 0.343e-6■■■□□ 16.4
EIF3DO15371 TBC1D22A-207ENST00000441162 2636 ntTSL 214.82□□□□□ -0.043e-6■■■□□ 16.4
EIF3DO15371 TBC1D22A-201ENST00000337137 3787 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.053e-6■■■□□ 16.4
EIF3DO15371 TBC1D22A-203ENST00000380995 3934 ntTSL 1 (best) BASIC13.99□□□□□ -0.173e-6■■■□□ 16.4
EIF3DO15371 SFPQ-201ENST00000357214 3747 ntAPPRIS P1 TSL 1 (best) BASIC13.26□□□□□ -0.295e-10■■■□□ 16.3
EIF3DO15371 AGAP1-203ENST00000402604 563 ntTSL 413.22□□□□□ -0.291e-6■■■□□ 16.3
EIF3DO15371 GPAM-204ENST00000498541 351 ntTSL 34.7□□□□□ -1.663e-7■■■□□ 16.3
EIF3DO15371 PTPRN2-205ENST00000409483 4711 ntAPPRIS ALT2 TSL 2 BASIC17.52■□□□□ 0.399e-7■■■□□ 16.3
EIF3DO15371 PTPRN2-201ENST00000389413 4723 ntTSL 1 (best) BASIC17.24■□□□□ 0.359e-7■■■□□ 16.3
EIF3DO15371 PTPRN2-202ENST00000389416 4692 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.169e-7■■■□□ 16.3
EIF3DO15371 PTPRN2-203ENST00000389418 4706 ntAPPRIS P4 TSL 1 (best) BASIC13.8□□□□□ -0.29e-7■■■□□ 16.3
EIF3DO15371 SPNS1-209ENST00000567771 829 ntTSL 327.34■■□□□ 1.973e-8■■■□□ 16.2
EIF3DO15371 SPNS1-207ENST00000565975 1979 ntTSL 1 (best) BASIC24.54■■□□□ 1.523e-8■■■□□ 16.2
EIF3DO15371 SPNS1-212ENST00000568900 2253 ntTSL 223.03■■□□□ 1.283e-8■■■□□ 16.2
EIF3DO15371 SPNS1-203ENST00000334536 2027 ntTSL 1 (best) BASIC22.18■■□□□ 1.143e-8■■■□□ 16.2
EIF3DO15371 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC21.91■■□□□ 1.13e-8■■■□□ 16.2
EIF3DO15371 SPNS1-201ENST00000311008 2208 ntAPPRIS P1 TSL 1 (best) BASIC21.47■■□□□ 1.033e-8■■■□□ 16.2
EIF3DO15371 SPNS1-210ENST00000568388 759 ntTSL 320.64■□□□□ 0.893e-8■■■□□ 16.2
EIF3DO15371 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC20.3■□□□□ 0.843e-8■■■□□ 16.2
EIF3DO15371 SPNS1-202ENST00000323081 2102 ntTSL 2 BASIC19.31■□□□□ 0.683e-8■■■□□ 16.2
EIF3DO15371 DRD4-201ENST00000176183 1375 ntAPPRIS P1 TSL 1 (best) BASIC32.05■■■□□ 2.722e-6■■■□□ 16.1
EIF3DO15371 MSH2-206ENST00000543555 3024 ntTSL 2 BASIC15.28■□□□□ 0.042e-6■■■□□ 16.1
EIF3DO15371 MSH2-201ENST00000233146 3307 ntAPPRIS P1 TSL 1 (best) BASIC13.24□□□□□ -0.292e-6■■■□□ 16.1
EIF3DO15371 MSH2-202ENST00000406134 3628 ntTSL 1 (best) BASIC10.76□□□□□ -0.692e-6■■■□□ 16.1
EIF3DO15371 PKD1-208ENST00000472577 1140 ntTSL 218.8■□□□□ 0.61e-6■■■□□ 16.1
EIF3DO15371 SRCAP-203ENST00000411466 836 ntTSL 324.2■■□□□ 1.462e-6■■■□□ 16
EIF3DO15371 PCBD2-201ENST00000254908 1223 ntAPPRIS P1 TSL 1 (best) BASIC29.76■■■□□ 2.351e-10■■■□□ 16
EIF3DO15371 PCBD2-202ENST00000504352 961 ntTSL 59.28□□□□□ -0.921e-10■■■□□ 16
EIF3DO15371 PCBD2-204ENST00000512783 5621 ntAPPRIS P1 TSL 1 (best) BASIC8.76□□□□□ -1.011e-10■■■□□ 16
EIF3DO15371 PCBD2-203ENST00000510013 361 ntTSL 53.3□□□□□ -1.881e-10■■■□□ 16
EIF3DO15371 IGF2R-201ENST00000356956 14044 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.234e-6■■■□□ 16
EIF3DO15371 TBX2-AS1-202ENST00000589814 539 ntTSL 3 BASIC27.06■■□□□ 1.921e-7■■■□□ 16
EIF3DO15371 TBX2-AS1-203ENST00000590421 861 ntTSL 2 BASIC25.89■■□□□ 1.741e-7■■■□□ 16
EIF3DO15371 TBX2-AS1-204ENST00000591313 640 ntTSL 219.85■□□□□ 0.771e-7■■■□□ 16
EIF3DO15371 TBX2-AS1-205ENST00000592009 330 ntTSL 318.04■□□□□ 0.481e-7■■■□□ 16
EIF3DO15371 AC005746.2-201ENST00000585765 470 ntTSL 5 BASIC10.49□□□□□ -0.731e-7■■■□□ 16
EIF3DO15371 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC20.78■□□□□ 0.927e-6■■■□□ 15.9
EIF3DO15371 INSR-205ENST00000598216 2961 ntTSL 1 (best)13.15□□□□□ -0.37e-6■■■□□ 15.9
EIF3DO15371 GON4L-202ENST00000361040 5118 ntTSL 1 (best) BASIC11.46□□□□□ -0.582e-8■■■□□ 15.9
EIF3DO15371 INSR-202ENST00000341500 8954 ntAPPRIS ALT2 TSL 1 (best) BASIC10.52□□□□□ -0.737e-6■■■□□ 15.9
EIF3DO15371 GON4L-218ENST00000620426 5506 ntTSL 1 (best) BASIC9.31□□□□□ -0.922e-8■■■□□ 15.9
EIF3DO15371 GON4L-219ENST00000622608 4801 ntTSL 5 BASIC9.14□□□□□ -0.952e-8■■■□□ 15.9
EIF3DO15371 GON4L-203ENST00000368331 7823 ntAPPRIS ALT2 TSL 1 (best) BASIC8.87□□□□□ -0.992e-8■■■□□ 15.9
EIF3DO15371 GON4L-217ENST00000615926 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC8.67□□□□□ -1.022e-8■■■□□ 15.9
EIF3DO15371 GON4L-209ENST00000471341 5097 ntTSL 28.53□□□□□ -1.042e-8■■■□□ 15.9
EIF3DO15371 GON4L-201ENST00000271883 7138 ntAPPRIS P3 TSL 5 BASIC7.77□□□□□ -1.172e-8■■■□□ 15.9
EIF3DO15371 GON4L-204ENST00000437809 7713 ntAPPRIS P3 TSL 5 BASIC7.54□□□□□ -1.22e-8■■■□□ 15.9
EIF3DO15371 GON4L-213ENST00000488251 779 ntTSL 34.66□□□□□ -1.662e-8■■■□□ 15.9
Retrieved 100 of 4,069 protein–RNA pairs in 285 ms