RNA–Protein interactions for RNA: ENST00000439638.1

MDN1-202, Transcript of midasin AAA ATPase 1, humanhuman

TSL 5

Gene MDN1, Length 3,654 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDN1-202ENST00000439638 NISCHQ9Y2I1 1504 aa25.42■■□□□ 1.66
MDN1-202ENST00000439638 SHROOM4Q9ULL8 1493 aa23.84■■□□□ 1.41
MDN1-202ENST00000439638 SUPT5HO00267 1087 aaKnown RBP23.8■■□□□ 1.4
MDN1-202ENST00000439638 DCAF8L2P0C7V8 631 aa23.74■■□□□ 1.39
MDN1-202ENST00000439638 PCGF6Q9BYE7 350 aa22.79■■□□□ 1.24
MDN1-202ENST00000439638 EHMT2Q96KQ7 1210 aa22.71■■□□□ 1.23
MDN1-202ENST00000439638 PPARGC1BQ86YN6 1023 aaKnown RBP22.37■■□□□ 1.17
MDN1-202ENST00000439638 CHIC1Q5VXU3 224 aa22.29■■□□□ 1.16
MDN1-202ENST00000439638 FAM9AQ8IZU1 332 aaPredicted RBP22.29■■□□□ 1.16
MDN1-202ENST00000439638 LOC105371045A0A1W2PR82 267 aa22.28■■□□□ 1.16
MDN1-202ENST00000439638 HRCP23327 699 aa22.24■■□□□ 1.15
MDN1-202ENST00000439638 TTBK1Q5TCY1 1321 aaPredicted RBP21.93■■□□□ 1.1
MDN1-202ENST00000439638 MYO15BQ96JP2 1530 aa21.76■■□□□ 1.07
MDN1-202ENST00000439638 TRIM41Q8WV44 630 aa21.75■■□□□ 1.07
MDN1-202ENST00000439638 TRIM26Q12899 539 aaPredicted RBP21.63■■□□□ 1.05
MDN1-202ENST00000439638 CCER1Q8TC90 406 aaPredicted RBP21.38■■□□□ 1.01
MDN1-202ENST00000439638 ZCCHC6Q5VYS8 1495 aaKnown RBP21.31■■□□□ 1
MDN1-202ENST00000439638 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP21.28■■□□□ 1
MDN1-202ENST00000439638 RANGAP1P46060 587 aaPredicted RBP21.27■■□□□ 1
MDN1-202ENST00000439638 ZEB1P37275 1124 aaPredicted RBP21.27■■□□□ 1
MDN1-202ENST00000439638 YTHDC1Q96MU7 727 aaKnown RBP21.15■□□□□ 0.98
MDN1-202ENST00000439638 ABCC9O60706 1549 aa21.12■□□□□ 0.97
MDN1-202ENST00000439638 CCDC180Q9P1Z9 1646 aa21.05■□□□□ 0.96
MDN1-202ENST00000439638 UBTFP17480 764 aaKnown RBP21.02■□□□□ 0.96
MDN1-202ENST00000439638 DCAF1Q9Y4B6 1507 aa20.93■□□□□ 0.94
MDN1-202ENST00000439638 PELP1Q8IZL8 1130 aaKnown RBP20.91■□□□□ 0.94
MDN1-202ENST00000439638 SCAF1Q9H7N4 1312 aaKnown RBP20.86■□□□□ 0.93
MDN1-202ENST00000439638 CENPBP07199 599 aaPredicted RBP20.86■□□□□ 0.93
MDN1-202ENST00000439638 HNRNPUL2Q1KMD3 747 aaKnown RBP20.83■□□□□ 0.93
MDN1-202ENST00000439638 DIEXFQ68CQ4 756 aaKnown RBP20.81■□□□□ 0.92
MDN1-202ENST00000439638 APLP2Q06481 763 aa20.77■□□□□ 0.92
MDN1-202ENST00000439638 GTF3C3Q9Y5Q9 886 aa20.75■□□□□ 0.91
MDN1-202ENST00000439638 SCRIBQ14160 1630 aa20.67■□□□□ 0.9
MDN1-202ENST00000439638 NEUROD1Q13562 356 aa20.66■□□□□ 0.9
MDN1-202ENST00000439638 ACIN1Q9UKV3 1341 aaKnown RBP20.58■□□□□ 0.89
MDN1-202ENST00000439638 RSF1Q96T23 1441 aaPredicted RBP20.57■□□□□ 0.88
MDN1-202ENST00000439638 ITGAEP38570 1179 aa20.51■□□□□ 0.87
MDN1-202ENST00000439638 PABPN1Q86U42 306 aaKnown RBP eCLIP20.5■□□□□ 0.87
MDN1-202ENST00000439638 ATP1B4Q9UN42 357 aaPredicted RBP20.38■□□□□ 0.85
MDN1-202ENST00000439638 ZNF316A6NFI3 1004 aaPredicted RBP20.33■□□□□ 0.84
MDN1-202ENST00000439638 CECR2Q9BXF3 1484 aa20.31■□□□□ 0.84
MDN1-202ENST00000439638 RB1CC1Q8TDY2 1594 aa20.29■□□□□ 0.84
MDN1-202ENST00000439638 CSRNP3Q8WYN3 585 aa20.28■□□□□ 0.84
MDN1-202ENST00000439638 MIER1Q8N108 512 aa20.22■□□□□ 0.83
MDN1-202ENST00000439638 BCANQ96GW7 911 aa20.11■□□□□ 0.81
MDN1-202ENST00000439638 MYT1Q01538 1121 aa20.07■□□□□ 0.8
MDN1-202ENST00000439638 MROH2BQ7Z745 1585 aa20.03■□□□□ 0.8
MDN1-202ENST00000439638 CEP162Q5TB80 1403 aa20.02■□□□□ 0.79
MDN1-202ENST00000439638 SOGA1O94964 1423 aa20■□□□□ 0.79
MDN1-202ENST00000439638 ABCC8Q09428 1581 aa19.93■□□□□ 0.78
MDN1-202ENST00000439638 NACADO15069 1562 aa19.92■□□□□ 0.78
MDN1-202ENST00000439638 CNGB1Q14028 1251 aaPredicted RBP19.91■□□□□ 0.78
MDN1-202ENST00000439638 CCDC88BA6NC98 1476 aa19.91■□□□□ 0.78
MDN1-202ENST00000439638 FAM50AQ14320 339 aaKnown RBP19.86■□□□□ 0.77
MDN1-202ENST00000439638 P3H3Q8IVL6 736 aa19.86■□□□□ 0.77
MDN1-202ENST00000439638 WIZO95785 1651 aa19.85■□□□□ 0.77
MDN1-202ENST00000439638 HIRIP3Q9BW71 556 aaPredicted RBP19.85■□□□□ 0.77
MDN1-202ENST00000439638 RUSC2Q8N2Y8 1516 aa19.79■□□□□ 0.76
MDN1-202ENST00000439638 NEFLP07196 543 aa19.78■□□□□ 0.76
MDN1-202ENST00000439638 TNIKQ9UKE5 1360 aa19.73■□□□□ 0.75
MDN1-202ENST00000439638 CLIP1P30622 1438 aa19.73■□□□□ 0.75
MDN1-202ENST00000439638 DDX10Q13206 875 aaKnown RBP19.72■□□□□ 0.75
MDN1-202ENST00000439638 TRIM52Q96A61 297 aa19.64■□□□□ 0.73
MDN1-202ENST00000439638 FKBP8Q14318 412 aa19.63■□□□□ 0.73
MDN1-202ENST00000439638 WRNQ14191 1432 aaPredicted RBP eCLIP19.61■□□□□ 0.73
MDN1-202ENST00000439638 POLR3GLQ9BT43 218 aa19.6■□□□□ 0.73
MDN1-202ENST00000439638 GOLGA3Q08378 1498 aa19.6■□□□□ 0.73
MDN1-202ENST00000439638 KANK4Q5T7N3 995 aaPredicted RBP19.6■□□□□ 0.73
MDN1-202ENST00000439638 ERICH6Q7L0X2 663 aa19.58■□□□□ 0.72
MDN1-202ENST00000439638 KCNH8Q96L42 1107 aa19.56■□□□□ 0.72
MDN1-202ENST00000439638 ARID3CA6NKF2 412 aa19.53■□□□□ 0.72
MDN1-202ENST00000439638 SIN3AQ96ST3 1273 aa19.52■□□□□ 0.72
MDN1-202ENST00000439638 SUPT16HQ9Y5B9 1047 aaKnown RBP19.52■□□□□ 0.72
MDN1-202ENST00000439638 BAZ1AQ9NRL2 1556 aaPredicted RBP19.51■□□□□ 0.71
MDN1-202ENST00000439638 IRX6P78412 446 aaPredicted RBP19.49■□□□□ 0.71
MDN1-202ENST00000439638 ANP32CO43423 234 aa19.44■□□□□ 0.7
MDN1-202ENST00000439638 SENP3-EIF4A1A0A087X0R7 540 aa19.41■□□□□ 0.7
MDN1-202ENST00000439638 EEA1Q15075 1411 aa19.41■□□□□ 0.7
MDN1-202ENST00000439638 CEP164Q9UPV0 1460 aa19.39■□□□□ 0.69
MDN1-202ENST00000439638 RAPGEF2Q9Y4G8 1499 aa19.34■□□□□ 0.69
MDN1-202ENST00000439638 VPS8Q8N3P4 1428 aa19.33■□□□□ 0.68
MDN1-202ENST00000439638 CHIC2Q9UKJ5 165 aa19.31■□□□□ 0.68
MDN1-202ENST00000439638 HNRNPUQ00839 825 aaKnown RBP eCLIP19.3■□□□□ 0.68
MDN1-202ENST00000439638 ZNF326Q5BKZ1 582 aaKnown RBP19.27■□□□□ 0.68
MDN1-202ENST00000439638 TOP2AP11388 1531 aaKnown RBP19.27■□□□□ 0.68
MDN1-202ENST00000439638 TSHZ2Q9NRE2 1034 aa19.24■□□□□ 0.67
MDN1-202ENST00000439638 DHX57Q6P158 1386 aaKnown RBP19.22■□□□□ 0.67
MDN1-202ENST00000439638 FAM9BQ8IZU0 186 aa19.21■□□□□ 0.67
MDN1-202ENST00000439638 BAZ1BQ9UIG0 1483 aaKnown RBP19.2■□□□□ 0.66
MDN1-202ENST00000439638 SMARCA2P51531 1590 aa19.2■□□□□ 0.66
MDN1-202ENST00000439638 CCNB3Q8WWL7 1395 aa19.17■□□□□ 0.66
MDN1-202ENST00000439638 TONSLQ96HA7 1378 aa19.17■□□□□ 0.66
MDN1-202ENST00000439638 SMARCA4P51532 1647 aa19.15■□□□□ 0.66
MDN1-202ENST00000439638 RRP7BPQ9NSQ0 103 aa19.14■□□□□ 0.66
MDN1-202ENST00000439638 CDK11AQ9UQ88 783 aaPredicted RBP19.14■□□□□ 0.65
MDN1-202ENST00000439638 BICRAQ9NZM4 1560 aa19.13■□□□□ 0.65
MDN1-202ENST00000439638 UNC13AQ9UPW8 1703 aa19.12■□□□□ 0.65
MDN1-202ENST00000439638 ANP32EQ9BTT0 268 aa19.12■□□□□ 0.65
MDN1-202ENST00000439638 RAB3GAP2Q9H2M9 1393 aa19.12■□□□□ 0.65
MDN1-202ENST00000439638 BCL11AQ9H165 835 aa19.07■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms