RNA–Protein interactions for RNA: ENST00000480227.5

PKD1-213, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 1 (best)

Gene PKD1, Length 2,353 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-213ENST00000480227 NISCHQ9Y2I1 1504 aa36.25■■■■□ 3.39
PKD1-213ENST00000480227 CCDC180Q9P1Z9 1646 aa30.96■■■□□ 2.55
PKD1-213ENST00000480227 SHROOM4Q9ULL8 1493 aa30.73■■■□□ 2.51
PKD1-213ENST00000480227 ZCCHC6Q5VYS8 1495 aaKnown RBP30.62■■■□□ 2.49
PKD1-213ENST00000480227 DCAF8L2P0C7V8 631 aa30.11■■■□□ 2.41
PKD1-213ENST00000480227 SUPT5HO00267 1087 aaKnown RBP30■■■□□ 2.39
PKD1-213ENST00000480227 DCAF1Q9Y4B6 1507 aa29.73■■■□□ 2.35
PKD1-213ENST00000480227 CHIC1Q5VXU3 224 aa29.04■■■□□ 2.24
PKD1-213ENST00000480227 SCRIBQ14160 1630 aa28.99■■■□□ 2.23
PKD1-213ENST00000480227 MYO15BQ96JP2 1530 aa28.95■■■□□ 2.22
PKD1-213ENST00000480227 ABCC9O60706 1549 aa28.88■■■□□ 2.21
PKD1-213ENST00000480227 NACADO15069 1562 aa28.65■■■□□ 2.18
PKD1-213ENST00000480227 RSF1Q96T23 1441 aaPredicted RBP28.58■■■□□ 2.17
PKD1-213ENST00000480227 CECR2Q9BXF3 1484 aa28.31■■■□□ 2.12
PKD1-213ENST00000480227 RB1CC1Q8TDY2 1594 aa28.3■■■□□ 2.12
PKD1-213ENST00000480227 LOC105371045A0A1W2PR82 267 aa28.19■■■□□ 2.1
PKD1-213ENST00000480227 MROH2BQ7Z745 1585 aa28.18■■■□□ 2.1
PKD1-213ENST00000480227 WIZO95785 1651 aa28.05■■■□□ 2.08
PKD1-213ENST00000480227 TRIM41Q8WV44 630 aa27.95■■■□□ 2.06
PKD1-213ENST00000480227 PCGF6Q9BYE7 350 aa27.93■■■□□ 2.06
PKD1-213ENST00000480227 UNC13AQ9UPW8 1703 aa27.93■■■□□ 2.06
PKD1-213ENST00000480227 BAZ1AQ9NRL2 1556 aaPredicted RBP27.86■■■□□ 2.05
PKD1-213ENST00000480227 HRCP23327 699 aa27.79■■■□□ 2.04
PKD1-213ENST00000480227 FAM9AQ8IZU1 332 aaPredicted RBP27.74■■■□□ 2.03
PKD1-213ENST00000480227 SMARCA4P51532 1647 aa27.68■■■□□ 2.02
PKD1-213ENST00000480227 TOP2AP11388 1531 aaKnown RBP27.57■■■□□ 2
PKD1-213ENST00000480227 PABPN1Q86U42 306 aaKnown RBP eCLIP27.56■■■□□ 2
PKD1-213ENST00000480227 EIF4G1Q04637 1599 aaKnown RBP27.55■■■□□ 2
PKD1-213ENST00000480227 EHMT2Q96KQ7 1210 aa27.52■■■□□ 2
PKD1-213ENST00000480227 BICRAQ9NZM4 1560 aa27.52■■■□□ 2
PKD1-213ENST00000480227 CCDC88BA6NC98 1476 aa27.44■■□□□ 1.98
PKD1-213ENST00000480227 SMARCA2P51531 1590 aa27.43■■□□□ 1.98
PKD1-213ENST00000480227 TRIM26Q12899 539 aaPredicted RBP27.4■■□□□ 1.98
PKD1-213ENST00000480227 ABCC8Q09428 1581 aa27.33■■□□□ 1.97
PKD1-213ENST00000480227 PPARGC1BQ86YN6 1023 aaKnown RBP27.28■■□□□ 1.96
PKD1-213ENST00000480227 PEG3Q9GZU2 1588 aa27.14■■□□□ 1.94
PKD1-213ENST00000480227 ATAD2BQ9ULI0 1458 aa27■■□□□ 1.91
PKD1-213ENST00000480227 SOGA1O94964 1423 aa26.99■■□□□ 1.91
PKD1-213ENST00000480227 BAZ1BQ9UIG0 1483 aaKnown RBP26.92■■□□□ 1.9
PKD1-213ENST00000480227 RUSC2Q8N2Y8 1516 aa26.89■■□□□ 1.9
PKD1-213ENST00000480227 WRNQ14191 1432 aaPredicted RBP eCLIP26.86■■□□□ 1.89
PKD1-213ENST00000480227 CSRNP3Q8WYN3 585 aa26.78■■□□□ 1.88
PKD1-213ENST00000480227 SYNJ1O43426 1573 aa26.77■■□□□ 1.88
PKD1-213ENST00000480227 EEA1Q15075 1411 aa26.76■■□□□ 1.87
PKD1-213ENST00000480227 CEP162Q5TB80 1403 aa26.74■■□□□ 1.87
PKD1-213ENST00000480227 ZEB1P37275 1124 aaPredicted RBP26.71■■□□□ 1.87
PKD1-213ENST00000480227 TNIKQ9UKE5 1360 aa26.69■■□□□ 1.86
PKD1-213ENST00000480227 UBTFP17480 764 aaKnown RBP26.66■■□□□ 1.86
PKD1-213ENST00000480227 GOLGA3Q08378 1498 aa26.6■■□□□ 1.85
PKD1-213ENST00000480227 TTBK1Q5TCY1 1321 aaPredicted RBP26.57■■□□□ 1.84
PKD1-213ENST00000480227 NCAPD3P42695 1498 aa26.51■■□□□ 1.83
PKD1-213ENST00000480227 HMGXB3Q12766 1538 aa26.5■■□□□ 1.83
PKD1-213ENST00000480227 CEP164Q9UPV0 1460 aa26.47■■□□□ 1.83
PKD1-213ENST00000480227 KIF21BO75037 1637 aa26.46■■□□□ 1.83
PKD1-213ENST00000480227 TOP2BQ02880 1626 aa26.45■■□□□ 1.83
PKD1-213ENST00000480227 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.4■■□□□ 1.82
PKD1-213ENST00000480227 BIVM-ERCC5R4GMW8 1640 aa26.37■■□□□ 1.81
PKD1-213ENST00000480227 RAPGEF2Q9Y4G8 1499 aa26.35■■□□□ 1.81
PKD1-213ENST00000480227 CCER1Q8TC90 406 aaPredicted RBP26.29■■□□□ 1.8
PKD1-213ENST00000480227 CLIP1P30622 1438 aa26.29■■□□□ 1.8
PKD1-213ENST00000480227 CUX1P39880 1505 aa26.26■■□□□ 1.79
PKD1-213ENST00000480227 CFTRP13569 1480 aa26.24■■□□□ 1.79
PKD1-213ENST00000480227 RANGAP1P46060 587 aaPredicted RBP26.24■■□□□ 1.79
PKD1-213ENST00000480227 VPS8Q8N3P4 1428 aa26.14■■□□□ 1.78
PKD1-213ENST00000480227 PRXQ9BXM0 1461 aa26.1■■□□□ 1.77
PKD1-213ENST00000480227 PRDM2Q13029 1718 aa26.09■■□□□ 1.77
PKD1-213ENST00000480227 ERICH3Q5RHP9 1530 aa26.07■■□□□ 1.76
PKD1-213ENST00000480227 KIF27Q86VH2 1401 aa26.04■■□□□ 1.76
PKD1-213ENST00000480227 CC2D2AQ9P2K1 1620 aa26.02■■□□□ 1.76
PKD1-213ENST00000480227 CADPSQ9ULU8 1353 aa25.98■■□□□ 1.75
PKD1-213ENST00000480227 APLP2Q06481 763 aa25.98■■□□□ 1.75
PKD1-213ENST00000480227 HNRNPUL2Q1KMD3 747 aaKnown RBP25.93■■□□□ 1.74
PKD1-213ENST00000480227 ARAP1Q96P48 1450 aa25.92■■□□□ 1.74
PKD1-213ENST00000480227 CUX2O14529 1486 aa25.86■■□□□ 1.73
PKD1-213ENST00000480227 FGD5Q6ZNL6 1462 aa25.82■■□□□ 1.72
PKD1-213ENST00000480227 IGF1RP08069 1367 aa25.78■■□□□ 1.72
PKD1-213ENST00000480227 FANCD2Q9BXW9 1451 aa25.75■■□□□ 1.71
PKD1-213ENST00000480227 KANK4Q5T7N3 995 aaPredicted RBP25.74■■□□□ 1.71
PKD1-213ENST00000480227 ARHGAP35Q9NRY4 1499 aa25.74■■□□□ 1.71
PKD1-213ENST00000480227 NESP48681 1621 aa25.69■■□□□ 1.7
PKD1-213ENST00000480227 DIEXFQ68CQ4 756 aaKnown RBP25.68■■□□□ 1.7
PKD1-213ENST00000480227 CARMIL1Q5VZK9 1371 aa25.67■■□□□ 1.7
PKD1-213ENST00000480227 RAD54L2Q9Y4B4 1467 aa25.6■■□□□ 1.69
PKD1-213ENST00000480227 DNMBPQ6XZF7 1577 aa25.59■■□□□ 1.69
PKD1-213ENST00000480227 TOPBP1Q92547 1522 aa25.57■■□□□ 1.68
PKD1-213ENST00000480227 POLA1P09884 1462 aaPredicted RBP25.55■■□□□ 1.68
PKD1-213ENST00000480227 SCAF1Q9H7N4 1312 aaKnown RBP25.51■■□□□ 1.67
PKD1-213ENST00000480227 ZNF316A6NFI3 1004 aaPredicted RBP25.51■■□□□ 1.67
PKD1-213ENST00000480227 DNAJC5BQ9UF47 199 aa25.49■■□□□ 1.67
PKD1-213ENST00000480227 ABCA10Q8WWZ4 1543 aa25.49■■□□□ 1.67
PKD1-213ENST00000480227 RRBP1Q9P2E9 1410 aaKnown RBP25.49■■□□□ 1.67
PKD1-213ENST00000480227 LAMC3Q9Y6N6 1575 aa25.43■■□□□ 1.66
PKD1-213ENST00000480227 P3H3Q8IVL6 736 aa25.42■■□□□ 1.66
PKD1-213ENST00000480227 TIAM1Q13009 1591 aa25.41■■□□□ 1.66
PKD1-213ENST00000480227 URB2Q14146 1524 aaKnown RBP25.41■■□□□ 1.66
PKD1-213ENST00000480227 CCNB3Q8WWL7 1395 aa25.4■■□□□ 1.66
PKD1-213ENST00000480227 DHX57Q6P158 1386 aaKnown RBP25.38■■□□□ 1.65
PKD1-213ENST00000480227 ITGAEP38570 1179 aa25.36■■□□□ 1.65
PKD1-213ENST00000480227 CUL7Q14999 1698 aa25.34■■□□□ 1.65
PKD1-213ENST00000480227 NEUROD1Q13562 356 aa25.33■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 116.5 ms