Protein–RNA interactions for Protein: O15344

MID1, E3 ubiquitin-protein ligase Midline-1, humanhuman

Predictions only

Length 667 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MID1O15344 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
MID1O15344 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC26.25■■□□□ 1.79
MID1O15344 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
MID1O15344 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC26.24■■□□□ 1.79
MID1O15344 CHML-204ENST00000638121 920 ntTSL 2 BASIC26.24■■□□□ 1.79
MID1O15344 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC26.24■■□□□ 1.79
MID1O15344 LINC00273-201ENST00000539813 1452 ntBASIC26.23■■□□□ 1.79
MID1O15344 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC26.23■■□□□ 1.79
MID1O15344 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC26.22■■□□□ 1.79
MID1O15344 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
MID1O15344 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC26.21■■□□□ 1.79
MID1O15344 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
MID1O15344 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC26.21■■□□□ 1.79
MID1O15344 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC26.2■■□□□ 1.79
MID1O15344 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC26.2■■□□□ 1.79
MID1O15344 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC26.2■■□□□ 1.79
MID1O15344 AL135925.1-201ENST00000605920 1701 ntBASIC26.2■■□□□ 1.79
MID1O15344 UBP1-201ENST00000283628 2074 ntAPPRIS P3 TSL 2 BASIC26.2■■□□□ 1.78
MID1O15344 CENPV-201ENST00000299736 1165 ntAPPRIS P1 TSL 1 (best) BASIC26.19■■□□□ 1.78
MID1O15344 HES6-205ENST00000409356 528 ntTSL 2 BASIC26.19■■□□□ 1.78
MID1O15344 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC26.18■■□□□ 1.78
MID1O15344 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC26.18■■□□□ 1.78
MID1O15344 GRPEL2-204ENST00000513661 546 ntTSL 2 BASIC26.18■■□□□ 1.78
MID1O15344 HOXD8-201ENST00000313173 1917 ntAPPRIS P3 TSL 2 BASIC26.17■■□□□ 1.78
MID1O15344 NRG3-203ENST00000404547 2163 ntAPPRIS ALT2 TSL 1 (best) BASIC26.16■■□□□ 1.78
MID1O15344 AC127502.1-201ENST00000399971 1502 ntBASIC26.16■■□□□ 1.78
MID1O15344 RP9-201ENST00000297157 1121 ntAPPRIS P2 TSL 1 (best) BASIC26.16■■□□□ 1.78
MID1O15344 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC26.16■■□□□ 1.78
MID1O15344 METRNL-202ENST00000570778 967 ntTSL 5 BASIC26.16■■□□□ 1.78
MID1O15344 TFEB-204ENST00000373033 2331 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
MID1O15344 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC26.14■■□□□ 1.78
MID1O15344 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
MID1O15344 DTNBP1-212ENST00000622898 1305 ntTSL 1 (best) BASIC26.14■■□□□ 1.77
MID1O15344 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC26.13■■□□□ 1.77
MID1O15344 TRIOBP-205ENST00000407319 2125 ntAPPRIS P3 TSL 1 (best) BASIC26.13■■□□□ 1.77
MID1O15344 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC26.12■■□□□ 1.77
MID1O15344 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC26.12■■□□□ 1.77
MID1O15344 CERS2-201ENST00000271688 2544 ntAPPRIS P1 TSL 5 BASIC26.12■■□□□ 1.77
MID1O15344 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC26.12■■□□□ 1.77
MID1O15344 SHC2-201ENST00000264554 2494 ntAPPRIS P1 TSL 1 (best) BASIC26.11■■□□□ 1.77
MID1O15344 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC26.09■■□□□ 1.77
MID1O15344 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
MID1O15344 STARD10-220ENST00000545082 1085 ntTSL 3 BASIC26.09■■□□□ 1.77
MID1O15344 CHST11-202ENST00000546689 756 ntTSL 2 BASIC26.09■■□□□ 1.77
MID1O15344 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC26.08■■□□□ 1.77
MID1O15344 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC26.08■■□□□ 1.77
MID1O15344 GXYLT1-201ENST00000280876 1937 ntAPPRIS ALT2 TSL 1 (best) BASIC26.08■■□□□ 1.76
MID1O15344 DPF1-204ENST00000416611 2341 ntTSL 5 BASIC26.08■■□□□ 1.76
MID1O15344 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
MID1O15344 ATP8B2-201ENST00000368487 1523 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
MID1O15344 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC26.05■■□□□ 1.76
MID1O15344 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC26.05■■□□□ 1.76
MID1O15344 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC26.05■■□□□ 1.76
MID1O15344 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC26.04■■□□□ 1.76
MID1O15344 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC26.03■■□□□ 1.76
MID1O15344 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC26.03■■□□□ 1.76
MID1O15344 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC26.02■■□□□ 1.76
MID1O15344 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC26.02■■□□□ 1.76
MID1O15344 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC26.02■■□□□ 1.76
MID1O15344 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC26.02■■□□□ 1.76
MID1O15344 AC135983.2-203ENST00000454486 1613 ntBASIC26.01■■□□□ 1.75
MID1O15344 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC26.01■■□□□ 1.75
MID1O15344 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC26.01■■□□□ 1.75
MID1O15344 WHAMMP2-203ENST00000563942 1603 ntBASIC26.01■■□□□ 1.75
MID1O15344 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC26.01■■□□□ 1.75
MID1O15344 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC26■■□□□ 1.75
MID1O15344 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
MID1O15344 TAZ-215ENST00000612460 1793 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
MID1O15344 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC26■■□□□ 1.75
MID1O15344 HSD17B1P1-201ENST00000590052 955 ntBASIC26■■□□□ 1.75
MID1O15344 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC25.99■■□□□ 1.75
MID1O15344 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC25.99■■□□□ 1.75
MID1O15344 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC25.98■■□□□ 1.75
MID1O15344 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC25.98■■□□□ 1.75
MID1O15344 POU3F1-201ENST00000373012 2184 ntAPPRIS P1 BASIC25.97■■□□□ 1.75
MID1O15344 ABHD17AP3-201ENST00000503096 1137 ntBASIC25.97■■□□□ 1.75
MID1O15344 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC25.97■■□□□ 1.75
MID1O15344 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC25.97■■□□□ 1.75
MID1O15344 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC25.97■■□□□ 1.75
MID1O15344 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC25.96■■□□□ 1.75
MID1O15344 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC25.96■■□□□ 1.75
MID1O15344 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC25.96■■□□□ 1.75
MID1O15344 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
MID1O15344 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC25.94■■□□□ 1.74
MID1O15344 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC25.94■■□□□ 1.74
MID1O15344 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC25.94■■□□□ 1.74
MID1O15344 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC25.93■■□□□ 1.74
MID1O15344 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
MID1O15344 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
MID1O15344 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
MID1O15344 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC25.93■■□□□ 1.74
MID1O15344 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
MID1O15344 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC25.93■■□□□ 1.74
MID1O15344 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
MID1O15344 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC25.93■■□□□ 1.74
MID1O15344 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC25.93■■□□□ 1.74
MID1O15344 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC25.93■■□□□ 1.74
MID1O15344 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC25.93■■□□□ 1.74
MID1O15344 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.92■■□□□ 1.74
MID1O15344 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC25.92■■□□□ 1.74
Retrieved 100 of 98,524 protein–RNA pairs in 29.4 ms