Protein–RNA interactions for Protein: O00585

CCL21, C-C motif chemokine 21, humanhuman

Predictions only

Length 134 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL21O00585 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC23.29■■□□□ 1.32
CCL21O00585 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
CCL21O00585 TPRA1-201ENST00000296210 1725 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
CCL21O00585 MAP3K8-203ENST00000375322 932 ntTSL 2 BASIC23.29■■□□□ 1.32
CCL21O00585 GUSB-202ENST00000421103 1742 ntTSL 2 BASIC23.29■■□□□ 1.32
CCL21O00585 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
CCL21O00585 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC23.29■■□□□ 1.32
CCL21O00585 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC23.28■■□□□ 1.32
CCL21O00585 FOXD1-202ENST00000615637 2272 ntAPPRIS P1 BASIC23.28■■□□□ 1.32
CCL21O00585 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC23.28■■□□□ 1.32
CCL21O00585 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
CCL21O00585 CBWD5-202ENST00000377384 1347 ntTSL 1 (best) BASIC23.28■■□□□ 1.32
CCL21O00585 CEP120-209ENST00000515110 606 ntTSL 3 BASIC23.27■■□□□ 1.32
CCL21O00585 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
CCL21O00585 LINC00273-201ENST00000539813 1452 ntBASIC23.26■■□□□ 1.31
CCL21O00585 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC23.26■■□□□ 1.31
CCL21O00585 AVEN-201ENST00000306730 1605 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
CCL21O00585 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CCL21O00585 U2AF1-203ENST00000398137 1019 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CCL21O00585 U2AF1L5-212ENST00000639996 1019 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
CCL21O00585 RNF126P1-201ENST00000567452 1320 ntBASIC23.25■■□□□ 1.31
CCL21O00585 MTCP1-202ENST00000369476 2274 ntAPPRIS P1 TSL 3 BASIC23.24■■□□□ 1.31
CCL21O00585 C11orf63-202ENST00000307257 1964 ntTSL 2 BASIC23.24■■□□□ 1.31
CCL21O00585 BLOC1S3-202ENST00000587722 732 ntAPPRIS P1 BASIC23.24■■□□□ 1.31
CCL21O00585 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CCL21O00585 AL161658.1-201ENST00000623641 1967 ntBASIC23.23■■□□□ 1.31
CCL21O00585 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
CCL21O00585 OLFM2-201ENST00000264833 2019 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
CCL21O00585 BANF1-208ENST00000533166 1135 ntAPPRIS P1 TSL 2 BASIC23.22■■□□□ 1.31
CCL21O00585 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
CCL21O00585 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC23.21■■□□□ 1.31
CCL21O00585 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
CCL21O00585 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC23.21■■□□□ 1.31
CCL21O00585 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
CCL21O00585 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC23.2■■□□□ 1.3
CCL21O00585 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
CCL21O00585 HNRNPAB-204ENST00000504898 1785 ntAPPRIS P4 TSL 1 (best) BASIC23.19■■□□□ 1.3
CCL21O00585 HES7-202ENST00000541682 1674 ntAPPRIS ALT1 TSL 1 (best) BASIC23.19■■□□□ 1.3
CCL21O00585 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC23.19■■□□□ 1.3
CCL21O00585 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC23.19■■□□□ 1.3
CCL21O00585 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
CCL21O00585 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
CCL21O00585 HSD17B12-202ENST00000395700 994 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
CCL21O00585 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC23.16■■□□□ 1.3
CCL21O00585 SIAH1-203ENST00000394725 2147 ntAPPRIS P3 TSL 1 (best) BASIC23.16■■□□□ 1.3
CCL21O00585 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
CCL21O00585 AC022413.1-201ENST00000624602 984 ntBASIC23.16■■□□□ 1.3
CCL21O00585 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC23.16■■□□□ 1.3
CCL21O00585 AC010864.1-201ENST00000609407 1511 ntBASIC23.14■■□□□ 1.3
CCL21O00585 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC23.14■■□□□ 1.29
CCL21O00585 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC23.14■■□□□ 1.29
CCL21O00585 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CCL21O00585 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CCL21O00585 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC23.13■■□□□ 1.29
CCL21O00585 ABHD17A-202ENST00000292577 1757 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
CCL21O00585 BCL7B-201ENST00000223368 1975 ntAPPRIS P1 TSL 1 (best) BASIC23.12■■□□□ 1.29
CCL21O00585 PI4KAP1-202ENST00000611748 1906 ntTSL 1 (best) BASIC23.12■■□□□ 1.29
CCL21O00585 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC23.11■■□□□ 1.29
CCL21O00585 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC23.11■■□□□ 1.29
CCL21O00585 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC23.11■■□□□ 1.29
CCL21O00585 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC23.1■■□□□ 1.29
CCL21O00585 EBAG9-202ENST00000395785 1467 ntAPPRIS P1 TSL 1 (best) BASIC23.1■■□□□ 1.29
CCL21O00585 ATRNL1-207ENST00000527407 1583 ntTSL 5 BASIC23.1■■□□□ 1.29
CCL21O00585 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC23.1■■□□□ 1.29
CCL21O00585 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CCL21O00585 GATA6-202ENST00000581694 2057 ntAPPRIS P1 TSL 1 (best) BASIC23.09■■□□□ 1.29
CCL21O00585 HES4-202ENST00000428771 1040 ntTSL 2 BASIC23.09■■□□□ 1.29
CCL21O00585 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC23.09■■□□□ 1.29
CCL21O00585 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC23.09■■□□□ 1.29
CCL21O00585 TMEM229A-201ENST00000455783 2108 ntAPPRIS P1 BASIC23.09■■□□□ 1.29
CCL21O00585 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC23.08■■□□□ 1.29
CCL21O00585 FSD1L-204ENST00000469022 1836 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
CCL21O00585 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC23.08■■□□□ 1.29
CCL21O00585 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC23.08■■□□□ 1.29
CCL21O00585 LINC01918-201ENST00000436841 797 ntTSL 2 BASIC23.08■■□□□ 1.29
CCL21O00585 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC23.08■■□□□ 1.29
CCL21O00585 AC008813.1-201ENST00000536597 885 ntBASIC23.08■■□□□ 1.29
CCL21O00585 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC23.08■■□□□ 1.29
CCL21O00585 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC23.07■■□□□ 1.28
CCL21O00585 BOK-AS1-201ENST00000434306 643 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
CCL21O00585 NTF6A-201ENST00000591175 560 ntBASIC23.07■■□□□ 1.28
CCL21O00585 KIF13A-207ENST00000502704 1330 ntTSL 1 (best) BASIC23.07■■□□□ 1.28
CCL21O00585 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC23.06■■□□□ 1.28
CCL21O00585 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC23.06■■□□□ 1.28
CCL21O00585 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CCL21O00585 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.28
CCL21O00585 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC23.05■■□□□ 1.28
CCL21O00585 CISD3-204ENST00000613478 2074 ntAPPRIS P1 TSL 2 BASIC23.05■■□□□ 1.28
CCL21O00585 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC23.04■■□□□ 1.28
CCL21O00585 AC012354.3-201ENST00000623734 483 ntBASIC23.04■■□□□ 1.28
CCL21O00585 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
CCL21O00585 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC23.03■■□□□ 1.28
CCL21O00585 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC23.03■■□□□ 1.28
CCL21O00585 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CCL21O00585 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC23.02■■□□□ 1.28
CCL21O00585 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC23.01■■□□□ 1.27
CCL21O00585 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CCL21O00585 KHDRBS3-201ENST00000355849 1977 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.27
CCL21O00585 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC22.99■■□□□ 1.27
CCL21O00585 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC22.99■■□□□ 1.27
Retrieved 100 of 98,524 protein–RNA pairs in 11 ms