Protein–RNA interactions for Protein: O00305

CACNB4, Voltage-dependent L-type calcium channel subunit beta-4, humanhuman

Predicted RBP Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB4O00305 SH3GL3-202ENST00000427482 1806 ntAPPRIS P1 TSL 1 (best) BASIC25.74■■□□□ 1.71
CACNB4O00305 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
CACNB4O00305 AGAP3-211ENST00000473312 2039 ntTSL 1 (best) BASIC25.73■■□□□ 1.71
CACNB4O00305 GDI1-215ENST00000630693 786 ntTSL 4 BASIC25.73■■□□□ 1.71
CACNB4O00305 SLC15A4-201ENST00000266771 2779 ntAPPRIS P1 TSL 1 (best) BASIC25.73■■□□□ 1.71
CACNB4O00305 LINC00273-201ENST00000539813 1452 ntBASIC25.72■■□□□ 1.71
CACNB4O00305 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC25.72■■□□□ 1.71
CACNB4O00305 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC25.72■■□□□ 1.71
CACNB4O00305 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC25.72■■□□□ 1.71
CACNB4O00305 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC25.72■■□□□ 1.71
CACNB4O00305 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC25.72■■□□□ 1.71
CACNB4O00305 P2RX2-203ENST00000350048 1344 ntTSL 1 (best) BASIC25.72■■□□□ 1.71
CACNB4O00305 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC25.72■■□□□ 1.71
CACNB4O00305 HSD17B1-201ENST00000225929 1265 ntAPPRIS ALT2 TSL 2 BASIC25.71■■□□□ 1.71
CACNB4O00305 TMEM158-201ENST00000503771 1813 ntAPPRIS P1 BASIC25.71■■□□□ 1.71
CACNB4O00305 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC25.71■■□□□ 1.71
CACNB4O00305 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC25.71■■□□□ 1.71
CACNB4O00305 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC25.7■■□□□ 1.71
CACNB4O00305 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC25.7■■□□□ 1.7
CACNB4O00305 AC127502.1-201ENST00000399971 1502 ntBASIC25.7■■□□□ 1.7
CACNB4O00305 AURKAIP1-203ENST00000338370 1072 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
CACNB4O00305 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC25.7■■□□□ 1.7
CACNB4O00305 C11orf95-204ENST00000546282 390 ntTSL 3 BASIC25.7■■□□□ 1.7
CACNB4O00305 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC25.7■■□□□ 1.7
CACNB4O00305 AC016575.1-201ENST00000607026 382 ntBASIC25.7■■□□□ 1.7
CACNB4O00305 ANGPTL6-201ENST00000253109 1900 ntAPPRIS P1 TSL 1 (best) BASIC25.7■■□□□ 1.7
CACNB4O00305 EBPL-201ENST00000242827 914 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
CACNB4O00305 CR559946.2-201ENST00000623684 991 ntBASIC25.69■■□□□ 1.7
CACNB4O00305 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC25.69■■□□□ 1.7
CACNB4O00305 ARMC10-211ENST00000541300 2266 ntTSL 1 (best) BASIC25.68■■□□□ 1.7
CACNB4O00305 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC25.68■■□□□ 1.7
CACNB4O00305 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC25.68■■□□□ 1.7
CACNB4O00305 RPS2-202ENST00000526522 924 ntTSL 2 BASIC25.68■■□□□ 1.7
CACNB4O00305 DUX4L13-201ENST00000554103 1267 ntBASIC25.68■■□□□ 1.7
CACNB4O00305 DUX4L15-201ENST00000611059 1267 ntBASIC25.68■■□□□ 1.7
CACNB4O00305 DUX4L23-201ENST00000615195 1269 ntBASIC25.68■■□□□ 1.7
CACNB4O00305 DUX4L24-201ENST00000617576 1269 ntBASIC25.68■■□□□ 1.7
CACNB4O00305 DUX4L22-201ENST00000618238 1269 ntBASIC25.68■■□□□ 1.7
CACNB4O00305 DUX4L20-201ENST00000619712 1269 ntBASIC25.68■■□□□ 1.7
CACNB4O00305 DUX4L21-201ENST00000622058 1269 ntBASIC25.68■■□□□ 1.7
CACNB4O00305 DUX4L10-201ENST00000622460 1267 ntBASIC25.68■■□□□ 1.7
CACNB4O00305 DUX4L25-201ENST00000624915 1269 ntBASIC25.68■■□□□ 1.7
CACNB4O00305 CBLN1-201ENST00000219197 2435 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
CACNB4O00305 MIR639-201ENST00000384974 98 ntBASIC25.67■■□□□ 1.7
CACNB4O00305 KRT18-201ENST00000388835 1562 ntAPPRIS P1 TSL 1 (best) BASIC25.67■■□□□ 1.7
CACNB4O00305 GADD45G-201ENST00000252506 1065 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
CACNB4O00305 AL118558.1-203ENST00000553701 447 ntTSL 3 BASIC25.66■■□□□ 1.7
CACNB4O00305 NRXN1-228ENST00000628364 2444 ntTSL 5 BASIC25.66■■□□□ 1.7
CACNB4O00305 PHF23-201ENST00000320316 2037 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
CACNB4O00305 RRAD-202ENST00000420652 1476 ntAPPRIS P1 TSL 1 (best) BASIC25.66■■□□□ 1.7
CACNB4O00305 CHML-204ENST00000638121 920 ntTSL 2 BASIC25.65■■□□□ 1.7
CACNB4O00305 SLC35D2-203ENST00000375259 1361 ntTSL 1 (best) BASIC25.65■■□□□ 1.7
CACNB4O00305 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC25.65■■□□□ 1.7
CACNB4O00305 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC25.64■■□□□ 1.7
CACNB4O00305 RANBP1-202ENST00000402752 1132 ntAPPRIS ALT1 TSL 1 (best) BASIC25.64■■□□□ 1.7
CACNB4O00305 LDB1-202ENST00000425280 2089 ntTSL 5 BASIC25.62■■□□□ 1.69
CACNB4O00305 ING2-201ENST00000302327 1189 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
CACNB4O00305 SH3BP2-221ENST00000511747 2351 ntAPPRIS P3 TSL 1 (best) BASIC25.62■■□□□ 1.69
CACNB4O00305 RHOC-202ENST00000339083 1418 ntAPPRIS P1 TSL 1 (best) BASIC25.62■■□□□ 1.69
CACNB4O00305 GNAI2-202ENST00000313601 2464 ntAPPRIS P1 TSL 1 (best) BASIC25.61■■□□□ 1.69
CACNB4O00305 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC25.61■■□□□ 1.69
CACNB4O00305 FAAP20-202ENST00000378546 729 ntAPPRIS P1 TSL 1 (best) BASIC25.6■■□□□ 1.69
CACNB4O00305 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC25.6■■□□□ 1.69
CACNB4O00305 PARD6A-201ENST00000219255 1248 ntAPPRIS P3 TSL 1 (best) BASIC25.59■■□□□ 1.69
CACNB4O00305 CAAP1-205ENST00000520187 773 ntTSL 5 BASIC25.59■■□□□ 1.69
CACNB4O00305 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC25.59■■□□□ 1.69
CACNB4O00305 AC231981.1-201ENST00000450917 974 ntTSL 3 BASIC25.58■■□□□ 1.69
CACNB4O00305 HES6-205ENST00000409356 528 ntTSL 2 BASIC25.57■■□□□ 1.68
CACNB4O00305 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC25.57■■□□□ 1.68
CACNB4O00305 MIR4449-201ENST00000578365 66 ntBASIC25.57■■□□□ 1.68
CACNB4O00305 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC25.57■■□□□ 1.68
CACNB4O00305 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC25.56■■□□□ 1.68
CACNB4O00305 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC25.56■■□□□ 1.68
CACNB4O00305 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC25.56■■□□□ 1.68
CACNB4O00305 ST7-AS1-201ENST00000456775 1889 ntBASIC25.55■■□□□ 1.68
CACNB4O00305 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC25.55■■□□□ 1.68
CACNB4O00305 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
CACNB4O00305 RPS2-201ENST00000343262 985 ntAPPRIS P1 TSL 1 (best) BASIC25.54■■□□□ 1.68
CACNB4O00305 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC25.53■■□□□ 1.68
CACNB4O00305 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC25.53■■□□□ 1.68
CACNB4O00305 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC25.52■■□□□ 1.68
CACNB4O00305 AC135983.2-203ENST00000454486 1613 ntBASIC25.52■■□□□ 1.68
CACNB4O00305 C16orf95-205ENST00000567970 1031 ntAPPRIS ALT2 TSL 5 BASIC25.52■■□□□ 1.68
CACNB4O00305 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC25.52■■□□□ 1.68
CACNB4O00305 ANKRD16-201ENST00000191063 1567 ntTSL 3 BASIC25.52■■□□□ 1.68
CACNB4O00305 CHST11-202ENST00000546689 756 ntTSL 2 BASIC25.51■■□□□ 1.67
CACNB4O00305 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC25.51■■□□□ 1.67
CACNB4O00305 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC25.51■■□□□ 1.67
CACNB4O00305 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC25.51■■□□□ 1.67
CACNB4O00305 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC25.51■■□□□ 1.67
CACNB4O00305 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC25.51■■□□□ 1.67
CACNB4O00305 CTXN1-201ENST00000318978 1274 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
CACNB4O00305 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC25.5■■□□□ 1.67
CACNB4O00305 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC25.5■■□□□ 1.67
CACNB4O00305 WHAMMP2-203ENST00000563942 1603 ntBASIC25.49■■□□□ 1.67
CACNB4O00305 NREP-216ENST00000508870 540 ntAPPRIS P1 TSL 4 BASIC25.49■■□□□ 1.67
CACNB4O00305 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC25.49■■□□□ 1.67
CACNB4O00305 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
CACNB4O00305 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
CACNB4O00305 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC25.49■■□□□ 1.67
Retrieved 100 of 98,524 protein–RNA pairs in 61.4 ms