Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 TESK1-201ENST00000336395 2421 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CHKB-CPT1BH3BT56 ZFYVE21-201ENST00000216602 1521 ntAPPRIS ALT2 TSL 2 BASIC14.73□□□□□ -0.05
CHKB-CPT1BH3BT56 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CHKB-CPT1BH3BT56 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CHKB-CPT1BH3BT56 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC14.73□□□□□ -0.05
CHKB-CPT1BH3BT56 AKR1E2-201ENST00000298375 1566 ntAPPRIS P1 TSL 1 (best) BASIC14.73□□□□□ -0.05
CHKB-CPT1BH3BT56 KCNQ5-207ENST00000403813 6539 ntAPPRIS ALT2 TSL 5 BASIC14.72□□□□□ -0.05
CHKB-CPT1BH3BT56 E2F4-201ENST00000379378 2096 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CHKB-CPT1BH3BT56 ARID1B-202ENST00000346085 10194 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CHKB-CPT1BH3BT56 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC14.72□□□□□ -0.05
CHKB-CPT1BH3BT56 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC14.72□□□□□ -0.05
CHKB-CPT1BH3BT56 ADRA2C-201ENST00000330055 2129 ntAPPRIS P1 BASIC14.72□□□□□ -0.05
CHKB-CPT1BH3BT56 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC14.72□□□□□ -0.05
CHKB-CPT1BH3BT56 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CHKB-CPT1BH3BT56 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
CHKB-CPT1BH3BT56 KLF9-201ENST00000377126 5175 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
CHKB-CPT1BH3BT56 PQLC1-203ENST00000397778 2555 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.06
CHKB-CPT1BH3BT56 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
CHKB-CPT1BH3BT56 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CHKB-CPT1BH3BT56 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
CHKB-CPT1BH3BT56 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
CHKB-CPT1BH3BT56 C3orf70-201ENST00000335012 5901 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
CHKB-CPT1BH3BT56 HOMEZ-201ENST00000357460 4971 ntAPPRIS P2 TSL 1 (best) BASIC14.7□□□□□ -0.06
CHKB-CPT1BH3BT56 PKM-204ENST00000449901 2526 ntTSL 2 BASIC14.69□□□□□ -0.06
CHKB-CPT1BH3BT56 OTUD5-201ENST00000156084 2740 ntAPPRIS P3 TSL 1 (best) BASIC14.69□□□□□ -0.06
CHKB-CPT1BH3BT56 SLC35A3-205ENST00000465289 5696 ntAPPRIS P1 TSL 5 BASIC14.69□□□□□ -0.06
CHKB-CPT1BH3BT56 NR2F2-201ENST00000394166 5275 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CHKB-CPT1BH3BT56 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC14.69□□□□□ -0.06
CHKB-CPT1BH3BT56 CACNG6-201ENST00000252729 1853 ntAPPRIS P1 TSL 1 (best) BASIC14.69□□□□□ -0.06
CHKB-CPT1BH3BT56 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
CHKB-CPT1BH3BT56 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CHKB-CPT1BH3BT56 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CHKB-CPT1BH3BT56 RBM26-207ENST00000622611 5230 ntTSL 2 BASIC14.68□□□□□ -0.06
CHKB-CPT1BH3BT56 PPP1CA-203ENST00000376745 1476 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
CHKB-CPT1BH3BT56 MBOAT7-202ENST00000338624 2076 ntTSL 2 BASIC14.67□□□□□ -0.06
CHKB-CPT1BH3BT56 PLCL1-201ENST00000428675 5125 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CHKB-CPT1BH3BT56 PURG-202ENST00000475541 2875 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
CHKB-CPT1BH3BT56 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC14.67□□□□□ -0.06
CHKB-CPT1BH3BT56 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CHKB-CPT1BH3BT56 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
CHKB-CPT1BH3BT56 SOX4-201ENST00000244745 5852 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
CHKB-CPT1BH3BT56 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
CHKB-CPT1BH3BT56 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC14.66□□□□□ -0.06
CHKB-CPT1BH3BT56 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
CHKB-CPT1BH3BT56 CUEDC1-202ENST00000407144 2190 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
CHKB-CPT1BH3BT56 KCNK3-202ENST00000620977 1956 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
CHKB-CPT1BH3BT56 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
CHKB-CPT1BH3BT56 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CHKB-CPT1BH3BT56 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
CHKB-CPT1BH3BT56 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CHKB-CPT1BH3BT56 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CHKB-CPT1BH3BT56 ZNF652-202ENST00000430262 4701 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
CHKB-CPT1BH3BT56 WNK2-204ENST00000427277 6108 ntTSL 5 BASIC14.65□□□□□ -0.06
CHKB-CPT1BH3BT56 SCARA3-202ENST00000337221 1910 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
CHKB-CPT1BH3BT56 ARMC10-208ENST00000441711 2524 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
CHKB-CPT1BH3BT56 NT5DC2-202ENST00000422318 1795 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
CHKB-CPT1BH3BT56 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CHKB-CPT1BH3BT56 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CHKB-CPT1BH3BT56 RBM26-202ENST00000438724 5152 ntAPPRIS ALT1 TSL 1 (best) BASIC14.63□□□□□ -0.07
CHKB-CPT1BH3BT56 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC14.63□□□□□ -0.07
CHKB-CPT1BH3BT56 DHRS13-202ENST00000394901 2037 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
CHKB-CPT1BH3BT56 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC14.63□□□□□ -0.07
CHKB-CPT1BH3BT56 ARMC10-202ENST00000323716 2635 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CHKB-CPT1BH3BT56 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
CHKB-CPT1BH3BT56 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CHKB-CPT1BH3BT56 CREM-210ENST00000374721 2020 ntTSL 5 BASIC14.62□□□□□ -0.07
CHKB-CPT1BH3BT56 ADCY5-202ENST00000462833 7311 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CHKB-CPT1BH3BT56 ANKLE2-201ENST00000357997 4646 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
CHKB-CPT1BH3BT56 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC14.61□□□□□ -0.07
CHKB-CPT1BH3BT56 PWWP2B-202ENST00000631148 2013 ntTSL 5 BASIC14.61□□□□□ -0.07
CHKB-CPT1BH3BT56 AGAP3-216ENST00000479901 1881 ntTSL 5 BASIC14.61□□□□□ -0.07
CHKB-CPT1BH3BT56 SHF-207ENST00000560540 2062 ntTSL 5 BASIC14.61□□□□□ -0.07
CHKB-CPT1BH3BT56 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC14.6□□□□□ -0.07
CHKB-CPT1BH3BT56 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CHKB-CPT1BH3BT56 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC14.6□□□□□ -0.07
CHKB-CPT1BH3BT56 KCNK1-202ENST00000366621 2161 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CHKB-CPT1BH3BT56 KMT5B-201ENST00000304363 5837 ntAPPRIS P1 TSL 5 BASIC14.6□□□□□ -0.07
CHKB-CPT1BH3BT56 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC14.6□□□□□ -0.07
CHKB-CPT1BH3BT56 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC14.6□□□□□ -0.07
CHKB-CPT1BH3BT56 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC14.59□□□□□ -0.07
CHKB-CPT1BH3BT56 NISCH-201ENST00000345716 5238 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
CHKB-CPT1BH3BT56 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC14.59□□□□□ -0.07
CHKB-CPT1BH3BT56 MARCH8-201ENST00000319836 5272 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CHKB-CPT1BH3BT56 ULK1-201ENST00000321867 5310 ntAPPRIS P1 TSL 1 (best) BASIC14.59□□□□□ -0.07
CHKB-CPT1BH3BT56 CCM2-201ENST00000258781 1894 ntAPPRIS P3 TSL 1 (best) BASIC14.59□□□□□ -0.07
CHKB-CPT1BH3BT56 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.07
CHKB-CPT1BH3BT56 TBC1D4-201ENST00000377625 6182 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
CHKB-CPT1BH3BT56 AC145285.7-201ENST00000614819 1539 ntBASIC14.58□□□□□ -0.08
CHKB-CPT1BH3BT56 SFRP5-201ENST00000266066 1836 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CHKB-CPT1BH3BT56 PITX1-201ENST00000265340 2406 ntAPPRIS P1 TSL 1 (best) BASIC14.58□□□□□ -0.08
CHKB-CPT1BH3BT56 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC14.58□□□□□ -0.08
CHKB-CPT1BH3BT56 MAPT-203ENST00000340799 5724 ntAPPRIS ALT2 TSL 1 (best) BASIC14.58□□□□□ -0.08
CHKB-CPT1BH3BT56 ATRNL1-209ENST00000609571 1818 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CHKB-CPT1BH3BT56 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CHKB-CPT1BH3BT56 PTPRJ-208ENST00000615445 4773 ntAPPRIS ALT2 TSL 5 BASIC14.57□□□□□ -0.08
CHKB-CPT1BH3BT56 ECHS1-201ENST00000368547 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.57□□□□□ -0.08
CHKB-CPT1BH3BT56 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC14.57□□□□□ -0.08
CHKB-CPT1BH3BT56 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC14.57□□□□□ -0.08
CHKB-CPT1BH3BT56 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC14.56□□□□□ -0.08
CHKB-CPT1BH3BT56 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC14.56□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 10.5 ms