Protein–RNA interactions for Protein: A8MSI8

LYRM9, LYR motif-containing protein 9, humanhuman

Predictions only

Length 78 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYRM9A8MSI8 AC021231.2-201ENST00000594613 730 ntBASIC18.53■□□□□ 0.56
LYRM9A8MSI8 ABCB10P1-201ENST00000614297 2181 ntBASIC18.53■□□□□ 0.56
LYRM9A8MSI8 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
LYRM9A8MSI8 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC18.53■□□□□ 0.56
LYRM9A8MSI8 SLC35D2-202ENST00000375257 889 ntTSL 2 BASIC18.52■□□□□ 0.56
LYRM9A8MSI8 NME2-202ENST00000393190 866 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
LYRM9A8MSI8 REPIN1-204ENST00000466559 1022 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
LYRM9A8MSI8 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
LYRM9A8MSI8 LRRC10B-201ENST00000378075 2219 ntAPPRIS P1 BASIC18.51■□□□□ 0.55
LYRM9A8MSI8 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
LYRM9A8MSI8 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
LYRM9A8MSI8 ZNF706-207ENST00000519882 959 ntAPPRIS P1 TSL 3 BASIC18.51■□□□□ 0.55
LYRM9A8MSI8 ZNF706-213ENST00000521272 732 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
LYRM9A8MSI8 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
LYRM9A8MSI8 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
LYRM9A8MSI8 UBALD1-202ENST00000587615 799 ntTSL 2 BASIC18.5■□□□□ 0.55
LYRM9A8MSI8 HGH1-207ENST00000628266 258 ntTSL 5 BASIC18.5■□□□□ 0.55
LYRM9A8MSI8 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
LYRM9A8MSI8 GLTP-201ENST00000318348 2356 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LYRM9A8MSI8 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
LYRM9A8MSI8 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
LYRM9A8MSI8 ANKRD13D-211ENST00000511455 2139 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
LYRM9A8MSI8 AL451007.3-201ENST00000640271 588 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
LYRM9A8MSI8 KCNF1-201ENST00000295082 2289 ntAPPRIS P1 BASIC18.48■□□□□ 0.55
LYRM9A8MSI8 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LYRM9A8MSI8 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LYRM9A8MSI8 LINC00273-201ENST00000539813 1452 ntBASIC18.48■□□□□ 0.55
LYRM9A8MSI8 ARHGDIG-201ENST00000219409 949 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LYRM9A8MSI8 GSC-201ENST00000238558 1264 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LYRM9A8MSI8 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.48■□□□□ 0.55
LYRM9A8MSI8 PLPPR3-204ENST00000520876 2328 ntAPPRIS ALT2 TSL 1 (best) BASIC18.48■□□□□ 0.55
LYRM9A8MSI8 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC18.47■□□□□ 0.55
LYRM9A8MSI8 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC18.47■□□□□ 0.55
LYRM9A8MSI8 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC18.47■□□□□ 0.55
LYRM9A8MSI8 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC18.47■□□□□ 0.55
LYRM9A8MSI8 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC18.47■□□□□ 0.55
LYRM9A8MSI8 CALM3-209ENST00000597743 577 ntTSL 4 BASIC18.47■□□□□ 0.55
LYRM9A8MSI8 AP004833.2-201ENST00000532228 1454 ntBASIC18.46■□□□□ 0.55
LYRM9A8MSI8 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.55
LYRM9A8MSI8 PI4KAP2-202ENST00000450651 2294 ntTSL 5 BASIC18.46■□□□□ 0.55
LYRM9A8MSI8 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC18.46■□□□□ 0.55
LYRM9A8MSI8 LSM14B-204ENST00000370915 1079 ntTSL 1 (best) BASIC18.46■□□□□ 0.55
LYRM9A8MSI8 TCAM1P-201ENST00000463377 452 ntTSL 3 BASIC18.46■□□□□ 0.55
LYRM9A8MSI8 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC18.46■□□□□ 0.55
LYRM9A8MSI8 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC18.46■□□□□ 0.55
LYRM9A8MSI8 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
LYRM9A8MSI8 NGB-201ENST00000298352 1884 ntAPPRIS P1 TSL 1 (best) BASIC18.46■□□□□ 0.54
LYRM9A8MSI8 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC18.45■□□□□ 0.54
LYRM9A8MSI8 ABHD17AP4-201ENST00000411545 909 ntBASIC18.45■□□□□ 0.54
LYRM9A8MSI8 MPST-206ENST00000429360 1331 ntTSL 1 (best) BASIC18.45■□□□□ 0.54
LYRM9A8MSI8 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC18.45■□□□□ 0.54
LYRM9A8MSI8 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC18.44■□□□□ 0.54
LYRM9A8MSI8 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC18.44■□□□□ 0.54
LYRM9A8MSI8 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC18.44■□□□□ 0.54
LYRM9A8MSI8 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC18.44■□□□□ 0.54
LYRM9A8MSI8 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC18.44■□□□□ 0.54
LYRM9A8MSI8 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
LYRM9A8MSI8 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC18.43■□□□□ 0.54
LYRM9A8MSI8 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.43■□□□□ 0.54
LYRM9A8MSI8 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC18.43■□□□□ 0.54
LYRM9A8MSI8 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC18.42■□□□□ 0.54
LYRM9A8MSI8 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC18.42■□□□□ 0.54
LYRM9A8MSI8 ZNRF2P2-203ENST00000454624 420 ntBASIC18.42■□□□□ 0.54
LYRM9A8MSI8 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC18.41■□□□□ 0.54
LYRM9A8MSI8 FOXA2-202ENST00000419308 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC18.41■□□□□ 0.54
LYRM9A8MSI8 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.41■□□□□ 0.54
LYRM9A8MSI8 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC18.41■□□□□ 0.54
LYRM9A8MSI8 AC096888.1-201ENST00000487097 565 ntTSL 4 BASIC18.41■□□□□ 0.54
LYRM9A8MSI8 LINC01971-201ENST00000617888 1048 ntBASIC18.41■□□□□ 0.54
LYRM9A8MSI8 AC116407.1-201ENST00000398832 1599 ntTSL 2 BASIC18.41■□□□□ 0.54
LYRM9A8MSI8 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LYRM9A8MSI8 LAPTM4B-203ENST00000521545 915 ntAPPRIS P1 TSL 1 (best) BASIC18.4■□□□□ 0.54
LYRM9A8MSI8 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC18.4■□□□□ 0.54
LYRM9A8MSI8 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC18.39■□□□□ 0.53
LYRM9A8MSI8 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
LYRM9A8MSI8 U2AF2-206ENST00000590551 1104 ntTSL 3 BASIC18.39■□□□□ 0.53
LYRM9A8MSI8 SIGMAR1-203ENST00000378892 1743 ntTSL 2 BASIC18.39■□□□□ 0.53
LYRM9A8MSI8 CUEDC1-201ENST00000360238 2193 ntAPPRIS P1 TSL 2 BASIC18.39■□□□□ 0.53
LYRM9A8MSI8 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC18.39■□□□□ 0.53
LYRM9A8MSI8 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC18.39■□□□□ 0.53
LYRM9A8MSI8 AC135983.2-203ENST00000454486 1613 ntBASIC18.38■□□□□ 0.53
LYRM9A8MSI8 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC18.38■□□□□ 0.53
LYRM9A8MSI8 DDN-AS1-203ENST00000552284 934 ntTSL 3 BASIC18.38■□□□□ 0.53
LYRM9A8MSI8 AL139393.2-201ENST00000608721 2025 ntBASIC18.38■□□□□ 0.53
LYRM9A8MSI8 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LYRM9A8MSI8 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LYRM9A8MSI8 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
LYRM9A8MSI8 FAM149A-201ENST00000227065 2708 ntAPPRIS P2 TSL 1 (best) BASIC18.37■□□□□ 0.53
LYRM9A8MSI8 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
LYRM9A8MSI8 WHRN-203ENST00000374057 1718 ntTSL 2 BASIC18.37■□□□□ 0.53
LYRM9A8MSI8 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.36■□□□□ 0.53
LYRM9A8MSI8 KIAA2013-202ENST00000376576 2539 ntTSL 2 BASIC18.36■□□□□ 0.53
LYRM9A8MSI8 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC18.36■□□□□ 0.53
LYRM9A8MSI8 FKBP1A-210ENST00000614856 562 ntTSL 2 BASIC18.36■□□□□ 0.53
LYRM9A8MSI8 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
LYRM9A8MSI8 MEST-211ENST00000437945 1455 ntTSL 5 BASIC18.35■□□□□ 0.53
LYRM9A8MSI8 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
LYRM9A8MSI8 AP000251.1-201ENST00000433071 822 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
LYRM9A8MSI8 RNF130-205ENST00000521389 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
LYRM9A8MSI8 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
Retrieved 100 of 98,524 protein–RNA pairs in 41.5 ms