Protein–RNA interactions for Protein: A6NLU0

RFPL4A, Ret finger protein-like 4A, humanhuman

Predictions only

Length 287 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFPL4AA6NLU0 NOP53-201ENST00000246802 1528 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
RFPL4AA6NLU0 GAL3ST1-205ENST00000406361 1819 ntAPPRIS P1 TSL 2 BASIC22.21■■□□□ 1.15
RFPL4AA6NLU0 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
RFPL4AA6NLU0 NREP-202ENST00000379671 2581 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
RFPL4AA6NLU0 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC22.2■■□□□ 1.14
RFPL4AA6NLU0 NOG-201ENST00000332822 1892 ntAPPRIS P1 BASIC22.2■■□□□ 1.14
RFPL4AA6NLU0 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC22.19■■□□□ 1.14
RFPL4AA6NLU0 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC22.19■■□□□ 1.14
RFPL4AA6NLU0 EFEMP2-201ENST00000307998 2034 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
RFPL4AA6NLU0 PIK3R2-208ENST00000617642 1446 ntTSL 5 BASIC22.18■■□□□ 1.14
RFPL4AA6NLU0 MIR762-201ENST00000390236 83 ntBASIC22.18■■□□□ 1.14
RFPL4AA6NLU0 SLC52A2-201ENST00000329994 1896 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
RFPL4AA6NLU0 BTBD19-203ENST00000450269 1572 ntAPPRIS P1 TSL 5 BASIC22.17■■□□□ 1.14
RFPL4AA6NLU0 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
RFPL4AA6NLU0 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
RFPL4AA6NLU0 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC22.17■■□□□ 1.14
RFPL4AA6NLU0 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
RFPL4AA6NLU0 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC22.16■■□□□ 1.14
RFPL4AA6NLU0 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC22.16■■□□□ 1.14
RFPL4AA6NLU0 AC012629.2-201ENST00000606513 377 ntTSL 5 BASIC22.16■■□□□ 1.14
RFPL4AA6NLU0 SHF-207ENST00000560540 2062 ntTSL 5 BASIC22.16■■□□□ 1.14
RFPL4AA6NLU0 HAUS7-201ENST00000370210 1593 ntAPPRIS ALT2 TSL 2 BASIC22.16■■□□□ 1.14
RFPL4AA6NLU0 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC22.15■■□□□ 1.14
RFPL4AA6NLU0 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
RFPL4AA6NLU0 CHML-205ENST00000638160 705 ntTSL 3 BASIC22.15■■□□□ 1.14
RFPL4AA6NLU0 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC22.15■■□□□ 1.14
RFPL4AA6NLU0 COL13A1-214ENST00000522165 2061 ntAPPRIS ALT2 TSL 5 BASIC22.15■■□□□ 1.14
RFPL4AA6NLU0 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
RFPL4AA6NLU0 WSB2-201ENST00000315436 2646 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.14
RFPL4AA6NLU0 MAPKAPK2-201ENST00000294981 2171 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
RFPL4AA6NLU0 AL121749.1-202ENST00000609313 2153 ntBASIC22.14■■□□□ 1.13
RFPL4AA6NLU0 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC22.14■■□□□ 1.13
RFPL4AA6NLU0 AL139393.1-201ENST00000417479 573 ntTSL 5 BASIC22.14■■□□□ 1.13
RFPL4AA6NLU0 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC22.14■■□□□ 1.13
RFPL4AA6NLU0 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
RFPL4AA6NLU0 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
RFPL4AA6NLU0 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC22.13■■□□□ 1.13
RFPL4AA6NLU0 SHARPIN-202ENST00000398712 1765 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
RFPL4AA6NLU0 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC22.13■■□□□ 1.13
RFPL4AA6NLU0 LYNX1-208ENST00000615007 1293 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
RFPL4AA6NLU0 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
RFPL4AA6NLU0 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC22.13■■□□□ 1.13
RFPL4AA6NLU0 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
RFPL4AA6NLU0 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
RFPL4AA6NLU0 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
RFPL4AA6NLU0 HNRNPLP2-201ENST00000568980 1570 ntBASIC22.12■■□□□ 1.13
RFPL4AA6NLU0 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
RFPL4AA6NLU0 LACTB-201ENST00000261893 1972 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
RFPL4AA6NLU0 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
RFPL4AA6NLU0 HDGF-210ENST00000537739 2073 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
RFPL4AA6NLU0 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC22.11■■□□□ 1.13
RFPL4AA6NLU0 AC010864.1-201ENST00000609407 1511 ntBASIC22.11■■□□□ 1.13
RFPL4AA6NLU0 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC22.1■■□□□ 1.13
RFPL4AA6NLU0 ZBTB10-204ENST00000455036 5458 ntAPPRIS P3 TSL 2 BASIC22.1■■□□□ 1.13
RFPL4AA6NLU0 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC22.1■■□□□ 1.13
RFPL4AA6NLU0 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC22.1■■□□□ 1.13
RFPL4AA6NLU0 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
RFPL4AA6NLU0 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
RFPL4AA6NLU0 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC22.09■■□□□ 1.13
RFPL4AA6NLU0 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
RFPL4AA6NLU0 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC22.09■■□□□ 1.13
RFPL4AA6NLU0 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
RFPL4AA6NLU0 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC22.09■■□□□ 1.13
RFPL4AA6NLU0 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
RFPL4AA6NLU0 PLEKHG6-206ENST00000536531 1683 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
RFPL4AA6NLU0 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
RFPL4AA6NLU0 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC22.07■■□□□ 1.12
RFPL4AA6NLU0 REXO4-202ENST00000371942 2360 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
RFPL4AA6NLU0 AC005559.1-201ENST00000589661 871 ntBASIC22.06■■□□□ 1.12
RFPL4AA6NLU0 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
RFPL4AA6NLU0 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC22.06■■□□□ 1.12
RFPL4AA6NLU0 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC22.05■■□□□ 1.12
RFPL4AA6NLU0 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC22.04■■□□□ 1.12
RFPL4AA6NLU0 SPIRE1-202ENST00000409402 5665 ntAPPRIS ALT2 TSL 1 (best) BASIC22.04■■□□□ 1.12
RFPL4AA6NLU0 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
RFPL4AA6NLU0 TAZ-205ENST00000475699 1862 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
RFPL4AA6NLU0 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
RFPL4AA6NLU0 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
RFPL4AA6NLU0 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.12
RFPL4AA6NLU0 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
RFPL4AA6NLU0 RPS2-209ENST00000529806 993 ntTSL 3 BASIC22.02■■□□□ 1.12
RFPL4AA6NLU0 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
RFPL4AA6NLU0 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC22.02■■□□□ 1.12
RFPL4AA6NLU0 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
RFPL4AA6NLU0 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC22■■□□□ 1.11
RFPL4AA6NLU0 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC22■■□□□ 1.11
RFPL4AA6NLU0 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC22■■□□□ 1.11
RFPL4AA6NLU0 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
RFPL4AA6NLU0 SPATA5L1-208ENST00000638607 1863 ntTSL 2 BASIC22■■□□□ 1.11
RFPL4AA6NLU0 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC22■■□□□ 1.11
RFPL4AA6NLU0 CAPNS1-204ENST00000587718 1558 ntAPPRIS ALT2 TSL 1 (best) BASIC21.99■■□□□ 1.11
RFPL4AA6NLU0 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
RFPL4AA6NLU0 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
RFPL4AA6NLU0 NFYB-205ENST00000551727 1727 ntAPPRIS P1 TSL 3 BASIC21.98■■□□□ 1.11
RFPL4AA6NLU0 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC21.98■■□□□ 1.11
RFPL4AA6NLU0 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RFPL4AA6NLU0 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC21.97■■□□□ 1.11
RFPL4AA6NLU0 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC21.97■■□□□ 1.11
RFPL4AA6NLU0 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
RFPL4AA6NLU0 MTCH1-202ENST00000373627 2057 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 9.3 ms